RNA–Protein interactions for RNA: ENST00000557559.1

PRKCH-225, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-225ENST00000557559 POTEJP0CG39 1038 aa9.97□□□□□ -0.81
PRKCH-225ENST00000557559 CANXP27824 592 aaKnown RBP9.97□□□□□ -0.81
PRKCH-225ENST00000557559 VEGFBP49765 207 aa9.97□□□□□ -0.81
PRKCH-225ENST00000557559 EIF5P55010 431 aaKnown RBP9.97□□□□□ -0.81
PRKCH-225ENST00000557559 MAP2K1Q02750 393 aaPredicted RBP9.97□□□□□ -0.81
PRKCH-225ENST00000557559 MKRN4PQ13434 485 aaPredicted RBP9.97□□□□□ -0.81
PRKCH-225ENST00000557559 PRR5LQ6MZQ0 368 aa9.97□□□□□ -0.81
PRKCH-225ENST00000557559 PRPF40BQ6NWY9 871 aaKnown RBP9.97□□□□□ -0.81
PRKCH-225ENST00000557559 PNMA8AQ86V59 439 aaPredicted RBP9.97□□□□□ -0.81
PRKCH-225ENST00000557559 TEX13AQ9BXU3 409 aaPredicted RBP9.97□□□□□ -0.81
PRKCH-225ENST00000557559 WBP1LQ9NX94 342 aa9.97□□□□□ -0.81
PRKCH-225ENST00000557559 CACNA1SQ13698 1873 aa9.97□□□□□ -0.81
PRKCH-225ENST00000557559 RASSF10A6NK89 507 aa9.96□□□□□ -0.82
PRKCH-225ENST00000557559 IL13P35225 146 aa9.96□□□□□ -0.82
PRKCH-225ENST00000557559 LBX1P52954 281 aa9.96□□□□□ -0.82
PRKCH-225ENST00000557559 SLC39A6Q13433 755 aa9.96□□□□□ -0.82
PRKCH-225ENST00000557559 CCDC93Q567U6 631 aa9.96□□□□□ -0.82
PRKCH-225ENST00000557559 TBC1D9BQ66K14 1250 aa9.96□□□□□ -0.82
PRKCH-225ENST00000557559 MASTLQ96GX5 879 aa9.96□□□□□ -0.82
PRKCH-225ENST00000557559 ABHD8Q96I13 439 aa9.96□□□□□ -0.82
PRKCH-225ENST00000557559 SETDB2Q96T68 719 aa9.96□□□□□ -0.82
PRKCH-225ENST00000557559 TAF1DQ9H5J8 278 aaPredicted RBP9.96□□□□□ -0.82
PRKCH-225ENST00000557559 PCDH10Q9P2E7 1040 aa9.96□□□□□ -0.82
PRKCH-225ENST00000557559 HACL1Q9UJ83 578 aa9.96□□□□□ -0.82
PRKCH-225ENST00000557559 TIMELESSQ9UNS1 1208 aa9.96□□□□□ -0.82
PRKCH-225ENST00000557559 IL6STP40189 918 aaPredicted RBP9.95□□□□□ -0.82
PRKCH-225ENST00000557559 FAM161AQ3B820 660 aa9.95□□□□□ -0.82
PRKCH-225ENST00000557559 EAPPQ56P03 285 aaPredicted RBP9.95□□□□□ -0.82
PRKCH-225ENST00000557559 LGR6Q9HBX8 967 aa9.95□□□□□ -0.82
PRKCH-225ENST00000557559 HEG1Q9ULI3 1381 aa9.95□□□□□ -0.82
PRKCH-225ENST00000557559 SLX4Q8IY92 1834 aa9.95□□□□□ -0.82
PRKCH-225ENST00000557559 ITGBL1O95965 494 aaPredicted RBP9.94□□□□□ -0.82
PRKCH-225ENST00000557559 SRGNP10124 158 aa9.94□□□□□ -0.82
PRKCH-225ENST00000557559 HSPA8P11142 646 aaKnown RBP9.94□□□□□ -0.82
PRKCH-225ENST00000557559 DEFB115Q30KQ5 88 aa9.94□□□□□ -0.82
PRKCH-225ENST00000557559 BEGAINQ9BUH8 593 aa9.94□□□□□ -0.82
PRKCH-225ENST00000557559 PANK3Q9H999 370 aa9.94□□□□□ -0.82
PRKCH-225ENST00000557559 CLEC11AQ9Y240 323 aa9.94□□□□□ -0.82
PRKCH-225ENST00000557559 ZNF330Q9Y3S2 320 aaPredicted RBP9.94□□□□□ -0.82
PRKCH-225ENST00000557559 EPHX2P34913 555 aa9.93□□□□□ -0.82
PRKCH-225ENST00000557559 FKBP4Q02790 459 aaKnown RBP eCLIP9.93□□□□□ -0.82
PRKCH-225ENST00000557559 MLLT1Q03111 559 aaPredicted RBP9.93□□□□□ -0.82
PRKCH-225ENST00000557559 TEFQ10587 303 aa9.93□□□□□ -0.82
PRKCH-225ENST00000557559 ZNF652Q9Y2D9 606 aa9.93□□□□□ -0.82
PRKCH-225ENST00000557559 KNSTRNQ9Y448 316 aa9.93□□□□□ -0.82
PRKCH-225ENST00000557559 WDR33Q9C0J8 1336 aaKnown RBP9.92□□□□□ -0.82
PRKCH-225ENST00000557559 NPR1P16066 1061 aa9.92□□□□□ -0.82
PRKCH-225ENST00000557559 ECE1P42892 770 aa9.92□□□□□ -0.82
PRKCH-225ENST00000557559 ZNF790Q6PG37 636 aa9.92□□□□□ -0.82
PRKCH-225ENST00000557559 RTKN2Q8IZC4 609 aa9.92□□□□□ -0.82
PRKCH-225ENST00000557559 ABT1Q9ULW3 272 aaKnown RBP9.92□□□□□ -0.82
PRKCH-225ENST00000557559 TBC1D2BQ9UPU7 963 aa9.92□□□□□ -0.82
PRKCH-225ENST00000557559 SIPA1L3O60292 1781 aaPredicted RBP9.92□□□□□ -0.82
PRKCH-225ENST00000557559 ZNF541Q9H0D2 1346 aa9.91□□□□□ -0.82
PRKCH-225ENST00000557559 RGL2O15211 777 aa9.91□□□□□ -0.82
PRKCH-225ENST00000557559 CAMTA2O94983 1202 aa9.91□□□□□ -0.82
PRKCH-225ENST00000557559 HMOX1P09601 288 aa9.91□□□□□ -0.82
PRKCH-225ENST00000557559 MTHFSDQ2M296 383 aaKnown RBP9.91□□□□□ -0.82
PRKCH-225ENST00000557559 CLEC4GQ6UXB4 293 aa9.91□□□□□ -0.82
PRKCH-225ENST00000557559 NBPF5PQ86XG9 351 aaPredicted RBP9.91□□□□□ -0.82
PRKCH-225ENST00000557559 CNTROBQ8N137 903 aa9.91□□□□□ -0.82
PRKCH-225ENST00000557559 GPC2Q8N158 579 aa9.91□□□□□ -0.82
PRKCH-225ENST00000557559 CCDC24Q8N4L8 307 aa9.91□□□□□ -0.82
PRKCH-225ENST00000557559 JDP2Q8WYK2 163 aa9.91□□□□□ -0.82
PRKCH-225ENST00000557559 ZNF496Q96IT1 587 aaPredicted RBP9.91□□□□□ -0.82
PRKCH-225ENST00000557559 FMNL2Q96PY5 1086 aa9.91□□□□□ -0.82
PRKCH-225ENST00000557559 RNF123Q5XPI4 1314 aa9.9□□□□□ -0.82
PRKCH-225ENST00000557559 CA12O43570 354 aa9.9□□□□□ -0.82
PRKCH-225ENST00000557559 LMOD1P29536 600 aaPredicted RBP9.9□□□□□ -0.82
PRKCH-225ENST00000557559 EIF4G2P78344 907 aaKnown RBP eCLIP9.9□□□□□ -0.82
PRKCH-225ENST00000557559 DZIP3Q86Y13 1208 aaKnown RBP9.9□□□□□ -0.82
PRKCH-225ENST00000557559 GAS2L2Q8NHY3 880 aa9.9□□□□□ -0.82
PRKCH-225ENST00000557559 C7orf43Q8WVR3 580 aa9.9□□□□□ -0.82
PRKCH-225ENST00000557559 CCDC85CA6NKD9 419 aa9.89□□□□□ -0.83
PRKCH-225ENST00000557559 GNAT3A8MTJ3 354 aa9.89□□□□□ -0.83
PRKCH-225ENST00000557559 FZD9O00144 591 aa9.89□□□□□ -0.83
PRKCH-225ENST00000557559 DIAPH1O60610 1272 aaKnown RBP9.89□□□□□ -0.83
PRKCH-225ENST00000557559 ALDH1B1P30837 517 aa9.89□□□□□ -0.83
PRKCH-225ENST00000557559 IARSP41252 1262 aaKnown RBP9.89□□□□□ -0.83
PRKCH-225ENST00000557559 RGS19P49795 217 aa9.89□□□□□ -0.83
PRKCH-225ENST00000557559 TPTE2Q6XPS3 522 aa9.89□□□□□ -0.83
PRKCH-225ENST00000557559 PAXIP1Q6ZW49 1069 aaPredicted RBP9.89□□□□□ -0.83
PRKCH-225ENST00000557559 CAPNS2Q96L46 248 aa9.89□□□□□ -0.83
PRKCH-225ENST00000557559 DDX21Q9NR30 783 aaKnown RBP eCLIP9.89□□□□□ -0.83
PRKCH-225ENST00000557559 ZNF277Q9NRM2 450 aaPredicted RBP9.89□□□□□ -0.83
PRKCH-225ENST00000557559 CLSPNQ9HAW4 1339 aa9.88□□□□□ -0.83
PRKCH-225ENST00000557559 KLRG2A4D1S0 409 aaPredicted RBP9.88□□□□□ -0.83
PRKCH-225ENST00000557559 EIF6P56537 245 aaKnown RBP9.88□□□□□ -0.83
PRKCH-225ENST00000557559 GRIPAP1Q4V328 841 aa9.88□□□□□ -0.83
PRKCH-225ENST00000557559 MAP1SQ66K74 1059 aaPredicted RBP9.88□□□□□ -0.83
PRKCH-225ENST00000557559 CC2D2BQ6DHV5 1058 aa9.88□□□□□ -0.83
PRKCH-225ENST00000557559 PSMD1Q99460 953 aa9.88□□□□□ -0.83
PRKCH-225ENST00000557559 LTBP1Q14766 1721 aa9.87□□□□□ -0.83
PRKCH-225ENST00000557559 A1BGP04217 495 aa9.87□□□□□ -0.83
PRKCH-225ENST00000557559 GPR101Q96P66 508 aaPredicted RBP9.87□□□□□ -0.83
PRKCH-225ENST00000557559 TRPM7Q96QT4 1865 aa9.87□□□□□ -0.83
PRKCH-225ENST00000557559 CEMIPQ8WUJ3 1361 aa9.87□□□□□ -0.83
PRKCH-225ENST00000557559 MAP2K2P36507 400 aa9.86□□□□□ -0.83
PRKCH-225ENST00000557559 AMER1Q5JTC6 1135 aaPredicted RBP9.86□□□□□ -0.83
PRKCH-225ENST00000557559 USP50Q70EL3 339 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms