RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 IFT57Q9NWB7 429 aa12.42□□□□□ -0.42
SUPT16H-207ENST00000557394 KDM4FA0A1W2PPD8 638 aa12.42□□□□□ -0.42
SUPT16H-207ENST00000557394 LRMPQ12912 555 aa12.42□□□□□ -0.42
SUPT16H-207ENST00000557394 FBXO38Q6PIJ6 1188 aa12.42□□□□□ -0.42
SUPT16H-207ENST00000557394 ERO1AQ96HE7 468 aa12.42□□□□□ -0.42
SUPT16H-207ENST00000557394 ALKQ9UM73 1620 aa12.41□□□□□ -0.42
SUPT16H-207ENST00000557394 NRXN3Q9Y4C0 1643 aa12.41□□□□□ -0.42
SUPT16H-207ENST00000557394 TUBGCP6Q96RT7 1819 aa12.41□□□□□ -0.42
SUPT16H-207ENST00000557394 LRRC7Q96NW7 1537 aa12.41□□□□□ -0.42
SUPT16H-207ENST00000557394 SETD1AO15047 1707 aaKnown RBP12.41□□□□□ -0.42
SUPT16H-207ENST00000557394 ANKRD26Q9UPS8 1709 aa12.41□□□□□ -0.42
SUPT16H-207ENST00000557394 FCHSD2O94868 740 aa12.41□□□□□ -0.42
SUPT16H-207ENST00000557394 HNRNPH2P55795 449 aaKnown RBP12.41□□□□□ -0.42
SUPT16H-207ENST00000557394 MYBPC2Q14324 1141 aa12.41□□□□□ -0.42
SUPT16H-207ENST00000557394 CEP135Q66GS9 1140 aa12.41□□□□□ -0.42
SUPT16H-207ENST00000557394 PLA2G4DQ86XP0 818 aa12.41□□□□□ -0.42
SUPT16H-207ENST00000557394 EFCC1Q9HA90 598 aa12.41□□□□□ -0.42
SUPT16H-207ENST00000557394 TULP4Q9NRJ4 1543 aa12.41□□□□□ -0.42
SUPT16H-207ENST00000557394 ERBB3P21860 1342 aa12.41□□□□□ -0.42
SUPT16H-207ENST00000557394 EPB41L2O43491 1005 aaKnown RBP12.4□□□□□ -0.42
SUPT16H-207ENST00000557394 DNAJC14Q6Y2X3 702 aaPredicted RBP12.4□□□□□ -0.42
SUPT16H-207ENST00000557394 ZNF513Q8N8E2 541 aaPredicted RBP12.4□□□□□ -0.42
SUPT16H-207ENST00000557394 PDE1AP54750 535 aa12.4□□□□□ -0.42
SUPT16H-207ENST00000557394 RNF20Q5VTR2 975 aa12.4□□□□□ -0.42
SUPT16H-207ENST00000557394 NOL10Q9BSC4 688 aaKnown RBP12.4□□□□□ -0.42
SUPT16H-207ENST00000557394 YY1AP1Q9H869 796 aa12.4□□□□□ -0.42
SUPT16H-207ENST00000557394 ZNF446Q9NWS9 450 aa12.4□□□□□ -0.42
SUPT16H-207ENST00000557394 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.4□□□□□ -0.42
SUPT16H-207ENST00000557394 ZNF215Q9UL58 517 aaPredicted RBP12.4□□□□□ -0.42
SUPT16H-207ENST00000557394 TRAK1Q9UPV9 953 aa12.4□□□□□ -0.42
SUPT16H-207ENST00000557394 ATP6V1DQ9Y5K8 247 aa12.4□□□□□ -0.42
SUPT16H-207ENST00000557394 CCDC171Q6TFL3 1326 aa12.4□□□□□ -0.43
SUPT16H-207ENST00000557394 DIAPH1O60610 1272 aaKnown RBP12.39□□□□□ -0.43
SUPT16H-207ENST00000557394 F13A1P00488 732 aa12.39□□□□□ -0.43
SUPT16H-207ENST00000557394 GNAI1P63096 354 aa12.39□□□□□ -0.43
SUPT16H-207ENST00000557394 NYAP1Q6ZVC0 841 aa12.39□□□□□ -0.43
SUPT16H-207ENST00000557394 ST7Q9NRC1 585 aa12.39□□□□□ -0.43
SUPT16H-207ENST00000557394 EID1Q9Y6B2 187 aa12.39□□□□□ -0.43
SUPT16H-207ENST00000557394 PLEKHG1Q9ULL1 1385 aa12.39□□□□□ -0.43
SUPT16H-207ENST00000557394 MARCH6O60337 910 aa12.39□□□□□ -0.43
SUPT16H-207ENST00000557394 ZNF75DP51815 510 aa12.39□□□□□ -0.43
SUPT16H-207ENST00000557394 RAD51AP2Q09MP3 1159 aa12.39□□□□□ -0.43
SUPT16H-207ENST00000557394 FOXD4Q12950 439 aaPredicted RBP12.39□□□□□ -0.43
SUPT16H-207ENST00000557394 BMS1Q14692 1282 aaKnown RBP12.39□□□□□ -0.43
SUPT16H-207ENST00000557394 TPD52L1Q16890 204 aaPredicted RBP12.39□□□□□ -0.43
SUPT16H-207ENST00000557394 MUM1L1Q5H9M0 696 aa12.39□□□□□ -0.43
SUPT16H-207ENST00000557394 MRVI1Q9Y6F6 885 aa12.39□□□□□ -0.43
SUPT16H-207ENST00000557394 SALL3Q9BXA9 1300 aa12.39□□□□□ -0.43
SUPT16H-207ENST00000557394 STX6O43752 255 aa12.38□□□□□ -0.43
SUPT16H-207ENST00000557394 EVI5LQ96CN4 794 aa12.38□□□□□ -0.43
SUPT16H-207ENST00000557394 NRBP1Q9UHY1 535 aa12.38□□□□□ -0.43
SUPT16H-207ENST00000557394 PRR29P0C7W0 189 aa12.38□□□□□ -0.43
SUPT16H-207ENST00000557394 H2AFXP16104 143 aaPredicted RBP12.38□□□□□ -0.43
SUPT16H-207ENST00000557394 CDC25BP30305 580 aa12.38□□□□□ -0.43
SUPT16H-207ENST00000557394 TWISTNBQ3B726 338 aaPredicted RBP12.38□□□□□ -0.43
SUPT16H-207ENST00000557394 TXNDC2Q86VQ3 553 aa12.38□□□□□ -0.43
SUPT16H-207ENST00000557394 EVC2Q86UK5 1308 aa12.37□□□□□ -0.43
SUPT16H-207ENST00000557394 KIAA0232Q92628 1395 aa12.37□□□□□ -0.43
SUPT16H-207ENST00000557394 FIBPO43427 364 aa12.37□□□□□ -0.43
SUPT16H-207ENST00000557394 SYT1P21579 422 aa12.37□□□□□ -0.43
SUPT16H-207ENST00000557394 TYRO3Q06418 890 aa12.37□□□□□ -0.43
SUPT16H-207ENST00000557394 ELF2Q15723 593 aa12.37□□□□□ -0.43
SUPT16H-207ENST00000557394 NFE2L2Q16236 605 aa12.37□□□□□ -0.43
SUPT16H-207ENST00000557394 RBM26Q5T8P6 1007 aaKnown RBP12.37□□□□□ -0.43
SUPT16H-207ENST00000557394 TDRD7Q8NHU6 1098 aaKnown RBP12.37□□□□□ -0.43
SUPT16H-207ENST00000557394 CACTINQ8WUQ7 758 aaKnown RBP12.37□□□□□ -0.43
SUPT16H-207ENST00000557394 MBIPQ9NS73 344 aa12.37□□□□□ -0.43
SUPT16H-207ENST00000557394 KCND1Q9NSA2 647 aa12.37□□□□□ -0.43
SUPT16H-207ENST00000557394 ZBTB12Q9Y330 459 aaPredicted RBP12.37□□□□□ -0.43
SUPT16H-207ENST00000557394 TPD52L2O43399 206 aaKnown RBP12.37□□□□□ -0.43
SUPT16H-207ENST00000557394 LTKP29376 864 aa12.37□□□□□ -0.43
SUPT16H-207ENST00000557394 UPF3BQ9BZI7 483 aaKnown RBP12.37□□□□□ -0.43
SUPT16H-207ENST00000557394 A0A1W2PP64 1363 aa12.36□□□□□ -0.43
SUPT16H-207ENST00000557394 CHMLP26374 656 aa12.36□□□□□ -0.43
SUPT16H-207ENST00000557394 LUZP1Q86V48 1076 aa12.36□□□□□ -0.43
SUPT16H-207ENST00000557394 CBX8Q9HC52 389 aa12.36□□□□□ -0.43
SUPT16H-207ENST00000557394 FHOD1Q9Y613 1164 aa12.36□□□□□ -0.43
SUPT16H-207ENST00000557394 DIP2AQ14689 1571 aa12.36□□□□□ -0.43
SUPT16H-207ENST00000557394 PTPRCP08575 1304 aa12.36□□□□□ -0.43
SUPT16H-207ENST00000557394 AATKQ6ZMQ8 1374 aa12.36□□□□□ -0.43
SUPT16H-207ENST00000557394 GOLIM4O00461 696 aa12.36□□□□□ -0.43
SUPT16H-207ENST00000557394 NEMFO60524 1076 aa12.36□□□□□ -0.43
SUPT16H-207ENST00000557394 SLU7O95391 586 aaKnown RBP12.36□□□□□ -0.43
SUPT16H-207ENST00000557394 MAP3K11Q16584 847 aa12.36□□□□□ -0.43
SUPT16H-207ENST00000557394 ARHGEF28Q8N1W1 1705 aaKnown RBP12.35□□□□□ -0.43
SUPT16H-207ENST00000557394 RAD50Q92878 1312 aa12.35□□□□□ -0.43
SUPT16H-207ENST00000557394 RBM43Q6ZSC3 357 aaKnown RBP12.35□□□□□ -0.43
SUPT16H-207ENST00000557394 CCDC82Q8N4S0 544 aa12.35□□□□□ -0.43
SUPT16H-207ENST00000557394 C8orf58Q8NAV2 365 aa12.35□□□□□ -0.43
SUPT16H-207ENST00000557394 CHMP4CQ96CF2 233 aa12.35□□□□□ -0.43
SUPT16H-207ENST00000557394 TTC14Q96N46 770 aa12.35□□□□□ -0.43
SUPT16H-207ENST00000557394 GEMIN8Q9NWZ8 242 aaKnown RBP12.35□□□□□ -0.43
SUPT16H-207ENST00000557394 RPS6KL1Q9Y6S9 549 aa12.35□□□□□ -0.43
SUPT16H-207ENST00000557394 ADAMTS13Q76LX8 1427 aa12.35□□□□□ -0.43
SUPT16H-207ENST00000557394 PRKAR2BP31323 418 aa12.34□□□□□ -0.43
SUPT16H-207ENST00000557394 HSPA4P34932 840 aa12.34□□□□□ -0.43
SUPT16H-207ENST00000557394 PTPN14Q15678 1187 aa12.34□□□□□ -0.43
SUPT16H-207ENST00000557394 RTF1Q92541 710 aaKnown RBP12.34□□□□□ -0.43
SUPT16H-207ENST00000557394 GGNBP2Q9H3C7 697 aa12.34□□□□□ -0.43
SUPT16H-207ENST00000557394 ANO2Q9NQ90 1003 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms