RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 PDIA6Q15084 440 aa27.37■■□□□ 1.97
RCCD1-208ENST00000557266 CLASRPQ8N2M8 674 aaKnown RBP27.37■■□□□ 1.97
RCCD1-208ENST00000557266 LINS1Q8NG48 757 aa27.37■■□□□ 1.97
RCCD1-208ENST00000557266 DDX21Q9NR30 783 aaKnown RBP eCLIP27.37■■□□□ 1.97
RCCD1-208ENST00000557266 SNX14Q9Y5W7 946 aa27.37■■□□□ 1.97
RCCD1-208ENST00000557266 RGPD5Q99666 1765 aa27.36■■□□□ 1.97
RCCD1-208ENST00000557266 ALS2Q96Q42 1657 aa27.36■■□□□ 1.97
RCCD1-208ENST00000557266 NASPP49321 788 aaPredicted RBP27.36■■□□□ 1.97
RCCD1-208ENST00000557266 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.36■■□□□ 1.97
RCCD1-208ENST00000557266 CWC27Q6UX04 472 aaKnown RBP27.35■■□□□ 1.97
RCCD1-208ENST00000557266 KAZALD1Q96I82 304 aa27.35■■□□□ 1.97
RCCD1-208ENST00000557266 UTYO14607 1347 aa27.35■■□□□ 1.97
RCCD1-208ENST00000557266 GRM8O00222 908 aa27.35■■□□□ 1.97
RCCD1-208ENST00000557266 SUCLG2Q96I99 432 aa27.35■■□□□ 1.97
RCCD1-208ENST00000557266 HDAC5Q9UQL6 1122 aa27.35■■□□□ 1.97
RCCD1-208ENST00000557266 ERC1Q8IUD2 1116 aa27.34■■□□□ 1.97
RCCD1-208ENST00000557266 ECHDC1Q9NTX5 307 aa27.34■■□□□ 1.97
RCCD1-208ENST00000557266 KDM6AO15550 1401 aaPredicted RBP27.34■■□□□ 1.97
RCCD1-208ENST00000557266 RASEFQ8IZ41 740 aa27.34■■□□□ 1.97
RCCD1-208ENST00000557266 RBM27Q9P2N5 1060 aaKnown RBP27.34■■□□□ 1.97
RCCD1-208ENST00000557266 NPHP3Q7Z494 1330 aa27.33■■□□□ 1.97
RCCD1-208ENST00000557266 DDX58O95786 925 aaKnown RBP27.33■■□□□ 1.97
RCCD1-208ENST00000557266 CLCN1P35523 988 aa27.33■■□□□ 1.97
RCCD1-208ENST00000557266 AIMP1Q12904 312 aaKnown RBP27.33■■□□□ 1.97
RCCD1-208ENST00000557266 SPG7Q9UQ90 795 aa27.33■■□□□ 1.97
RCCD1-208ENST00000557266 SLC39A6Q13433 755 aa27.32■■□□□ 1.96
RCCD1-208ENST00000557266 ZNF790Q6PG37 636 aa27.32■■□□□ 1.96
RCCD1-208ENST00000557266 TTC14Q96N46 770 aa27.32■■□□□ 1.96
RCCD1-208ENST00000557266 BICC1Q9H694 974 aaKnown RBP27.32■■□□□ 1.96
RCCD1-208ENST00000557266 ERBB4Q15303 1308 aa27.31■■□□□ 1.96
RCCD1-208ENST00000557266 KIAA1211Q6ZU35 1233 aa27.31■■□□□ 1.96
RCCD1-208ENST00000557266 RAPGEF4Q8WZA2 1011 aa27.31■■□□□ 1.96
RCCD1-208ENST00000557266 SLC52A2Q9HAB3 445 aa27.31■■□□□ 1.96
RCCD1-208ENST00000557266 NSFL1CQ9UNZ2 370 aaKnown RBP27.31■■□□□ 1.96
RCCD1-208ENST00000557266 IFIT2P09913 472 aaKnown RBP27.31■■□□□ 1.96
RCCD1-208ENST00000557266 DIAPH3Q9NSV4 1193 aa27.31■■□□□ 1.96
RCCD1-208ENST00000557266 IGKV5-2P06315 115 aa27.3■■□□□ 1.96
RCCD1-208ENST00000557266 GPATCH3Q96I76 525 aa27.3■■□□□ 1.96
RCCD1-208ENST00000557266 NLRP2Q9NX02 1062 aa27.3■■□□□ 1.96
RCCD1-208ENST00000557266 CCDC173Q0VFZ6 552 aa27.29■■□□□ 1.96
RCCD1-208ENST00000557266 BRINP3Q76B58 766 aa27.29■■□□□ 1.96
RCCD1-208ENST00000557266 PPP1R9BQ96SB3 815 aa27.29■■□□□ 1.96
RCCD1-208ENST00000557266 TMEM63CQ9P1W3 806 aa27.29■■□□□ 1.96
RCCD1-208ENST00000557266 SLAIN2Q9P270 581 aa27.29■■□□□ 1.96
RCCD1-208ENST00000557266 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.29■■□□□ 1.96
RCCD1-208ENST00000557266 ESPNB1AK53 854 aa27.29■■□□□ 1.96
RCCD1-208ENST00000557266 AACSQ86V21 672 aa27.29■■□□□ 1.96
RCCD1-208ENST00000557266 TRIM44Q96DX7 344 aaPredicted RBP27.29■■□□□ 1.96
RCCD1-208ENST00000557266 C5P01031 1676 aa27.28■■□□□ 1.96
RCCD1-208ENST00000557266 PHKG2P15735 406 aa27.28■■□□□ 1.96
RCCD1-208ENST00000557266 LTBP4Q8N2S1 1624 aa27.28■■□□□ 1.96
RCCD1-208ENST00000557266 SASH1O94885 1247 aa27.28■■□□□ 1.96
RCCD1-208ENST00000557266 MEGF6O75095 1541 aa27.27■■□□□ 1.96
RCCD1-208ENST00000557266 PRIM1P49642 420 aaKnown RBP27.27■■□□□ 1.96
RCCD1-208ENST00000557266 AK2P54819 239 aa27.27■■□□□ 1.96
RCCD1-208ENST00000557266 RUFY2Q8WXA3 655 aa27.27■■□□□ 1.96
RCCD1-208ENST00000557266 DDX17Q92841 729 aaKnown RBP27.27■■□□□ 1.96
RCCD1-208ENST00000557266 SCN11AQ9UI33 1791 aa27.26■■□□□ 1.96
RCCD1-208ENST00000557266 PTH1RQ03431 593 aa27.26■■□□□ 1.96
RCCD1-208ENST00000557266 RIC3Q7Z5B4 369 aa27.26■■□□□ 1.96
RCCD1-208ENST00000557266 RBSNQ9H1K0 784 aa27.26■■□□□ 1.96
RCCD1-208ENST00000557266 TATP17735 454 aaPredicted RBP27.26■■□□□ 1.95
RCCD1-208ENST00000557266 RUFY3Q7L099 469 aa27.26■■□□□ 1.95
RCCD1-208ENST00000557266 NFATC2IPQ8NCF5 419 aa27.26■■□□□ 1.95
RCCD1-208ENST00000557266 RPAP1Q9BWH6 1393 aaPredicted RBP27.26■■□□□ 1.95
RCCD1-208ENST00000557266 MBD3O95983 291 aa27.25■■□□□ 1.95
RCCD1-208ENST00000557266 EAF2Q96CJ1 260 aaPredicted RBP27.25■■□□□ 1.95
RCCD1-208ENST00000557266 EVI5LQ96CN4 794 aa27.25■■□□□ 1.95
RCCD1-208ENST00000557266 MYL6BP14649 208 aa27.25■■□□□ 1.95
RCCD1-208ENST00000557266 LARP1Q6PKG0 1096 aaKnown RBP27.25■■□□□ 1.95
RCCD1-208ENST00000557266 WDR33Q9C0J8 1336 aaKnown RBP27.25■■□□□ 1.95
RCCD1-208ENST00000557266 G3BP1Q13283 466 aaKnown RBP eCLIP27.24■■□□□ 1.95
RCCD1-208ENST00000557266 XAGE3Q8WTP9 111 aa27.24■■□□□ 1.95
RCCD1-208ENST00000557266 NEURL1BA8MQ27 555 aa27.23■■□□□ 1.95
RCCD1-208ENST00000557266 TNS3Q68CZ2 1445 aa27.23■■□□□ 1.95
RCCD1-208ENST00000557266 LIMCH1Q9UPQ0 1083 aa27.23■■□□□ 1.95
RCCD1-208ENST00000557266 CPA1P15085 419 aa27.23■■□□□ 1.95
RCCD1-208ENST00000557266 ZNF496Q96IT1 587 aaPredicted RBP27.23■■□□□ 1.95
RCCD1-208ENST00000557266 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.23■■□□□ 1.951e-8■■□□□ 11.4
RCCD1-208ENST00000557266 CASTP20810 708 aaKnown RBP27.22■■□□□ 1.95
RCCD1-208ENST00000557266 ANP32BQ92688 251 aaKnown RBP27.22■■□□□ 1.95
RCCD1-208ENST00000557266 GCKRQ14397 625 aa27.22■■□□□ 1.95
RCCD1-208ENST00000557266 COPS6Q7L5N1 327 aa27.22■■□□□ 1.95
RCCD1-208ENST00000557266 KCNB2Q92953 911 aa27.22■■□□□ 1.95
RCCD1-208ENST00000557266 LARP6Q9BRS8 491 aaKnown RBP27.22■■□□□ 1.95
RCCD1-208ENST00000557266 TLR7Q9NYK1 1049 aaKnown RBP27.22■■□□□ 1.95
RCCD1-208ENST00000557266 COL18A1P39060 1754 aa27.21■■□□□ 1.95
RCCD1-208ENST00000557266 SYCE3A1L190 88 aa27.21■■□□□ 1.95
RCCD1-208ENST00000557266 LRSAM1Q6UWE0 723 aa27.21■■□□□ 1.95
RCCD1-208ENST00000557266 CCDC8Q9H0W5 538 aaPredicted RBP27.21■■□□□ 1.95
RCCD1-208ENST00000557266 ABCC6O95255 1503 aa27.21■■□□□ 1.95
RCCD1-208ENST00000557266 NEXNQ0ZGT2 675 aa27.2■■□□□ 1.95
RCCD1-208ENST00000557266 PRPF40BQ6NWY9 871 aaKnown RBP27.2■■□□□ 1.95
RCCD1-208ENST00000557266 LRP10Q7Z4F1 713 aa27.2■■□□□ 1.95
RCCD1-208ENST00000557266 IFNL2Q8IZJ0 200 aa27.2■■□□□ 1.95
RCCD1-208ENST00000557266 METTL22Q9BUU2 404 aaPredicted RBP27.2■■□□□ 1.95
RCCD1-208ENST00000557266 SIL1Q9H173 461 aa27.2■■□□□ 1.95
RCCD1-208ENST00000557266 ADCK5Q3MIX3 580 aa27.2■■□□□ 1.94
RCCD1-208ENST00000557266 KLHDC4Q8TBB5 520 aa27.2■■□□□ 1.94
RCCD1-208ENST00000557266 NHSL1Q5SYE7 1610 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms