RNA–Protein interactions for RNA: ENST00000557253.1

RIPK3-205, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 2

Gene RIPK3, Length 657 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-205ENST00000557253 MASTLQ96GX5 879 aa13.07□□□□□ -0.32
RIPK3-205ENST00000557253 KNSTRNQ9Y448 316 aa13.07□□□□□ -0.32
RIPK3-205ENST00000557253 ZNF541Q9H0D2 1346 aa13.07□□□□□ -0.32
RIPK3-205ENST00000557253 HEG1Q9ULI3 1381 aa13.07□□□□□ -0.32
RIPK3-205ENST00000557253 SCN4AP35499 1836 aa13.06□□□□□ -0.32
RIPK3-205ENST00000557253 FAM161AQ3B820 660 aa13.06□□□□□ -0.32
RIPK3-205ENST00000557253 WBP1LQ9NX94 342 aa13.06□□□□□ -0.32
RIPK3-205ENST00000557253 ARFGEF2Q9Y6D5 1785 aa13.06□□□□□ -0.32
RIPK3-205ENST00000557253 CAMTA2O94983 1202 aa13.05□□□□□ -0.32
RIPK3-205ENST00000557253 SLC34A2O95436 690 aa13.05□□□□□ -0.32
RIPK3-205ENST00000557253 IL6STP40189 918 aaPredicted RBP13.05□□□□□ -0.32
RIPK3-205ENST00000557253 PIP4K2AP48426 406 aaPredicted RBP13.05□□□□□ -0.32
RIPK3-205ENST00000557253 EIF4G2P78344 907 aaKnown RBP eCLIP13.05□□□□□ -0.32
RIPK3-205ENST00000557253 SOGA3Q5TF21 947 aa13.05□□□□□ -0.32
RIPK3-205ENST00000557253 MAP1SQ66K74 1059 aaPredicted RBP13.05□□□□□ -0.32
RIPK3-205ENST00000557253 ZNF790Q6PG37 636 aa13.05□□□□□ -0.32
RIPK3-205ENST00000557253 OLFM4Q6UX06 510 aa13.05□□□□□ -0.32
RIPK3-205ENST00000557253 NPM2Q86SE8 214 aaKnown RBP13.05□□□□□ -0.32
RIPK3-205ENST00000557253 ABHD8Q96I13 439 aa13.05□□□□□ -0.32
RIPK3-205ENST00000557253 L3MBTL3Q96JM7 780 aaPredicted RBP13.05□□□□□ -0.32
RIPK3-205ENST00000557253 ZNF277Q9NRM2 450 aaPredicted RBP13.05□□□□□ -0.32
RIPK3-205ENST00000557253 HACL1Q9UJ83 578 aa13.05□□□□□ -0.32
RIPK3-205ENST00000557253 HSPA8P11142 646 aaKnown RBP13.04□□□□□ -0.32
RIPK3-205ENST00000557253 TEFQ10587 303 aa13.04□□□□□ -0.32
RIPK3-205ENST00000557253 DEFB115Q30KQ5 88 aa13.04□□□□□ -0.32
RIPK3-205ENST00000557253 CCDC93Q567U6 631 aa13.04□□□□□ -0.32
RIPK3-205ENST00000557253 IL17REQ8NFR9 667 aa13.04□□□□□ -0.32
RIPK3-205ENST00000557253 TEX13AQ9BXU3 409 aaPredicted RBP13.04□□□□□ -0.32
RIPK3-205ENST00000557253 TIMELESSQ9UNS1 1208 aa13.04□□□□□ -0.32
RIPK3-205ENST00000557253 RNF123Q5XPI4 1314 aa13.04□□□□□ -0.32
RIPK3-205ENST00000557253 BCORQ6W2J9 1755 aa13.03□□□□□ -0.32
RIPK3-205ENST00000557253 ADAMTSL1Q8N6G6 1762 aa13.03□□□□□ -0.32
RIPK3-205ENST00000557253 KCNQ3O43525 872 aa13.03□□□□□ -0.32
RIPK3-205ENST00000557253 DIAPH1O60610 1272 aaKnown RBP13.03□□□□□ -0.32
RIPK3-205ENST00000557253 EPHX2P34913 555 aa13.03□□□□□ -0.32
RIPK3-205ENST00000557253 NBPF5PQ86XG9 351 aaPredicted RBP13.03□□□□□ -0.32
RIPK3-205ENST00000557253 DZIP3Q86Y13 1208 aaKnown RBP13.03□□□□□ -0.32
RIPK3-205ENST00000557253 CNTROBQ8N137 903 aa13.03□□□□□ -0.32
RIPK3-205ENST00000557253 C7orf43Q8WVR3 580 aa13.03□□□□□ -0.32
RIPK3-205ENST00000557253 WDR33Q9C0J8 1336 aaKnown RBP13.03□□□□□ -0.32
RIPK3-205ENST00000557253 RASSF10A6NK89 507 aa13.02□□□□□ -0.33
RIPK3-205ENST00000557253 FAM177BA6PVY3 158 aa13.02□□□□□ -0.33
RIPK3-205ENST00000557253 FKBP4Q02790 459 aaKnown RBP eCLIP13.02□□□□□ -0.33
RIPK3-205ENST00000557253 AMER1Q5JTC6 1135 aaPredicted RBP13.02□□□□□ -0.33
RIPK3-205ENST00000557253 FMNL2Q96PY5 1086 aa13.02□□□□□ -0.33
RIPK3-205ENST00000557253 ABT1Q9ULW3 272 aaKnown RBP13.02□□□□□ -0.33
RIPK3-205ENST00000557253 SIPA1L3O60292 1781 aaPredicted RBP13.02□□□□□ -0.33
RIPK3-205ENST00000557253 PRAMEF22A3QJZ6 481 aa13.01□□□□□ -0.33
RIPK3-205ENST00000557253 GNAT3A8MTJ3 354 aa13.01□□□□□ -0.33
RIPK3-205ENST00000557253 NPR1P16066 1061 aa13.01□□□□□ -0.33
RIPK3-205ENST00000557253 FMR1Q06787 632 aaKnown RBP eCLIP13.01□□□□□ -0.33
RIPK3-205ENST00000557253 GRM1Q13255 1194 aa13.01□□□□□ -0.33
RIPK3-205ENST00000557253 CCDC85CA6NKD9 419 aa13□□□□□ -0.33
RIPK3-205ENST00000557253 MAP2K1Q02750 393 aaPredicted RBP13□□□□□ -0.33
RIPK3-205ENST00000557253 CNGB1Q14028 1251 aaPredicted RBP13□□□□□ -0.33
RIPK3-205ENST00000557253 PAXIP1Q6ZW49 1069 aaPredicted RBP13□□□□□ -0.33
RIPK3-205ENST00000557253 PNMA8AQ86V59 439 aaPredicted RBP13□□□□□ -0.33
RIPK3-205ENST00000557253 SYNE4Q8N205 404 aa13□□□□□ -0.33
RIPK3-205ENST00000557253 USP16Q9Y5T5 823 aa13□□□□□ -0.33
RIPK3-205ENST00000557253 BTBD11A6QL63 1104 aa12.99□□□□□ -0.33
RIPK3-205ENST00000557253 U2SURPO15042 1029 aaKnown RBP12.99□□□□□ -0.33
RIPK3-205ENST00000557253 IARSP41252 1262 aaKnown RBP12.99□□□□□ -0.33
RIPK3-205ENST00000557253 CC2D1BQ5T0F9 858 aaKnown RBP12.99□□□□□ -0.33
RIPK3-205ENST00000557253 FZD9O00144 591 aa12.98□□□□□ -0.33
RIPK3-205ENST00000557253 RTKN2Q8IZC4 609 aa12.98□□□□□ -0.33
RIPK3-205ENST00000557253 DDX21Q9NR30 783 aaKnown RBP eCLIP12.98□□□□□ -0.33
RIPK3-205ENST00000557253 TSKSQ9UJT2 592 aa12.98□□□□□ -0.33
RIPK3-205ENST00000557253 GJA3Q9Y6H8 435 aa12.98□□□□□ -0.33
RIPK3-205ENST00000557253 KLRG2A4D1S0 409 aaPredicted RBP12.97□□□□□ -0.33
RIPK3-205ENST00000557253 MLLT1Q03111 559 aaPredicted RBP12.97□□□□□ -0.33
RIPK3-205ENST00000557253 CYP4F22Q6NT55 531 aa12.97□□□□□ -0.33
RIPK3-205ENST00000557253 TPTE2Q6XPS3 522 aa12.97□□□□□ -0.33
RIPK3-205ENST00000557253 GPC2Q8N158 579 aa12.97□□□□□ -0.33
RIPK3-205ENST00000557253 GAS2L2Q8NHY3 880 aa12.97□□□□□ -0.33
RIPK3-205ENST00000557253 NIP7Q9Y221 180 aaKnown RBP eCLIP12.97□□□□□ -0.33
RIPK3-205ENST00000557253 LTBP1Q14766 1721 aa12.96□□□□□ -0.33
RIPK3-205ENST00000557253 CLEC4GQ6UXB4 293 aa12.96□□□□□ -0.33
RIPK3-205ENST00000557253 JDP2Q8WYK2 163 aa12.96□□□□□ -0.33
RIPK3-205ENST00000557253 CAPNS2Q96L46 248 aa12.96□□□□□ -0.33
RIPK3-205ENST00000557253 BEGAINQ9BUH8 593 aa12.96□□□□□ -0.33
RIPK3-205ENST00000557253 ZNF652Q9Y2D9 606 aa12.96□□□□□ -0.33
RIPK3-205ENST00000557253 COL4A5P29400 1685 aa12.96□□□□□ -0.34
RIPK3-205ENST00000557253 GTF2E1P29083 439 aaPredicted RBP12.95□□□□□ -0.34
RIPK3-205ENST00000557253 ALDH1B1P30837 517 aa12.95□□□□□ -0.34
RIPK3-205ENST00000557253 HLFQ16534 295 aa12.95□□□□□ -0.34
RIPK3-205ENST00000557253 PHACTR3Q96KR7 559 aa12.95□□□□□ -0.34
RIPK3-205ENST00000557253 CFAP44Q96MT7 982 aa12.95□□□□□ -0.34
RIPK3-205ENST00000557253 GPR101Q96P66 508 aaPredicted RBP12.95□□□□□ -0.34
RIPK3-205ENST00000557253 CEMIPQ8WUJ3 1361 aa12.94□□□□□ -0.34
RIPK3-205ENST00000557253 COL3A1P02461 1466 aaPredicted RBP12.94□□□□□ -0.34
RIPK3-205ENST00000557253 NBPF26B4DH59 902 aa12.94□□□□□ -0.34
RIPK3-205ENST00000557253 TRAF5O00463 557 aa12.94□□□□□ -0.34
RIPK3-205ENST00000557253 AOC2O75106 756 aa12.94□□□□□ -0.34
RIPK3-205ENST00000557253 LMOD1P29536 600 aaPredicted RBP12.94□□□□□ -0.34
RIPK3-205ENST00000557253 EPS15P42566 896 aa12.94□□□□□ -0.34
RIPK3-205ENST00000557253 EIF6P56537 245 aaKnown RBP12.94□□□□□ -0.34
RIPK3-205ENST00000557253 NBPF10Q6P3W6 841 aaKnown RBP12.94□□□□□ -0.34
RIPK3-205ENST00000557253 SLC51AQ86UW1 340 aa12.94□□□□□ -0.34
RIPK3-205ENST00000557253 NBPF15Q8N660 670 aa12.94□□□□□ -0.34
RIPK3-205ENST00000557253 THSD7BQ9C0I4 1608 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms