RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 MAP2K2P36507 400 aa17.4■□□□□ 0.38
PSEN1-220ENST00000557037 C1orf141Q5JVX7 400 aa17.4■□□□□ 0.38
PSEN1-220ENST00000557037 SOGA3Q5TF21 947 aa17.4■□□□□ 0.38
PSEN1-220ENST00000557037 CARD14Q9BXL6 1004 aa17.4■□□□□ 0.38
PSEN1-220ENST00000557037 POLKQ9UBT6 870 aa17.4■□□□□ 0.38
PSEN1-220ENST00000557037 ANKRD26Q9UPS8 1709 aa17.4■□□□□ 0.38
PSEN1-220ENST00000557037 CANXP27824 592 aaKnown RBP17.39■□□□□ 0.37
PSEN1-220ENST00000557037 CST9Q5W186 159 aa17.39■□□□□ 0.37
PSEN1-220ENST00000557037 STYK1Q6J9G0 422 aa17.39■□□□□ 0.37
PSEN1-220ENST00000557037 CA12O43570 354 aa17.38■□□□□ 0.37
PSEN1-220ENST00000557037 TLL2Q9Y6L7 1015 aa17.38■□□□□ 0.37
PSEN1-220ENST00000557037 SLC39A6Q13433 755 aa17.37■□□□□ 0.37
PSEN1-220ENST00000557037 AMOTQ4VCS5 1084 aa17.37■□□□□ 0.37
PSEN1-220ENST00000557037 CCDC93Q567U6 631 aa17.37■□□□□ 0.37
PSEN1-220ENST00000557037 NPHP1O15259 732 aa17.36■□□□□ 0.37
PSEN1-220ENST00000557037 SRGNP10124 158 aa17.36■□□□□ 0.37
PSEN1-220ENST00000557037 TNNT2P45379 298 aaPredicted RBP17.36■□□□□ 0.37
PSEN1-220ENST00000557037 OLFM4Q6UX06 510 aa17.36■□□□□ 0.37
PSEN1-220ENST00000557037 FKBP4Q02790 459 aaKnown RBP eCLIP17.35■□□□□ 0.37
PSEN1-220ENST00000557037 CIAPIN1Q6FI81 312 aa17.35■□□□□ 0.37
PSEN1-220ENST00000557037 AEBP1Q8IUX7 1158 aa17.35■□□□□ 0.37
PSEN1-220ENST00000557037 C7orf43Q8WVR3 580 aa17.35■□□□□ 0.37
PSEN1-220ENST00000557037 MASTLQ96GX5 879 aa17.35■□□□□ 0.37
PSEN1-220ENST00000557037 GJA3Q9Y6H8 435 aa17.35■□□□□ 0.37
PSEN1-220ENST00000557037 GPC2Q8N158 579 aa17.34■□□□□ 0.37
PSEN1-220ENST00000557037 CNBD1Q8NA66 436 aa17.34■□□□□ 0.37
PSEN1-220ENST00000557037 TRPM7Q96QT4 1865 aa17.33■□□□□ 0.37
PSEN1-220ENST00000557037 FZD9O00144 591 aa17.33■□□□□ 0.36
PSEN1-220ENST00000557037 SLC24A1O60721 1099 aa17.33■□□□□ 0.36
PSEN1-220ENST00000557037 BRPF1P55201 1214 aaPredicted RBP17.33■□□□□ 0.36
PSEN1-220ENST00000557037 ZNF330Q9Y3S2 320 aaPredicted RBP17.33■□□□□ 0.36
PSEN1-220ENST00000557037 TBC1D2BQ9UPU7 963 aa17.32■□□□□ 0.36
PSEN1-220ENST00000557037 ARFGEF2Q9Y6D5 1785 aa17.31■□□□□ 0.36
PSEN1-220ENST00000557037 A0A087WZG4 1122 aa17.31■□□□□ 0.36
PSEN1-220ENST00000557037 LMOD1P29536 600 aaPredicted RBP17.31■□□□□ 0.36
PSEN1-220ENST00000557037 IARSP41252 1262 aaKnown RBP17.31■□□□□ 0.36
PSEN1-220ENST00000557037 EPS15P42566 896 aa17.31■□□□□ 0.36
PSEN1-220ENST00000557037 EIF5P55010 431 aaKnown RBP17.31■□□□□ 0.36
PSEN1-220ENST00000557037 ST5P78524 1137 aa17.31■□□□□ 0.36
PSEN1-220ENST00000557037 SLC52A2Q9HAB3 445 aa17.31■□□□□ 0.36
PSEN1-220ENST00000557037 CELF2O95319 508 aaKnown RBP17.3■□□□□ 0.36
PSEN1-220ENST00000557037 SAPCD2Q86UD0 394 aa17.3■□□□□ 0.36
PSEN1-220ENST00000557037 SYNE4Q8N205 404 aa17.3■□□□□ 0.36
PSEN1-220ENST00000557037 ZIC5Q96T25 663 aa17.3■□□□□ 0.36
PSEN1-220ENST00000557037 SETDB2Q96T68 719 aa17.3■□□□□ 0.36
PSEN1-220ENST00000557037 LGR6Q9HBX8 967 aa17.3■□□□□ 0.36
PSEN1-220ENST00000557037 SCN11AQ9UI33 1791 aa17.29■□□□□ 0.36
PSEN1-220ENST00000557037 EIF6P56537 245 aaKnown RBP17.27■□□□□ 0.36
PSEN1-220ENST00000557037 RTKN2Q8IZC4 609 aa17.27■□□□□ 0.36
PSEN1-220ENST00000557037 JDP2Q8WYK2 163 aa17.27■□□□□ 0.36
PSEN1-220ENST00000557037 NPR1P16066 1061 aa17.26■□□□□ 0.35
PSEN1-220ENST00000557037 SCNN1DP51172 638 aa17.26■□□□□ 0.35
PSEN1-220ENST00000557037 ZNF408Q9H9D4 720 aa17.26■□□□□ 0.35
PSEN1-220ENST00000557037 STARD3NLO95772 234 aa17.25■□□□□ 0.35
PSEN1-220ENST00000557037 SULT6B1Q6IMI4 303 aa17.25■□□□□ 0.35
PSEN1-220ENST00000557037 USP50Q70EL3 339 aaPredicted RBP17.25■□□□□ 0.35
PSEN1-220ENST00000557037 VSIG10Q8N0Z9 540 aa17.25■□□□□ 0.35
PSEN1-220ENST00000557037 SCN7AQ01118 1682 aa17.25■□□□□ 0.35
PSEN1-220ENST00000557037 GLIS2Q9BZE0 524 aaPredicted RBP17.24■□□□□ 0.35
PSEN1-220ENST00000557037 COL4A5P29400 1685 aa17.23■□□□□ 0.35
PSEN1-220ENST00000557037 RNMTO43148 476 aaKnown RBP17.23■□□□□ 0.35
PSEN1-220ENST00000557037 AKAP4Q5JQC9 854 aa17.23■□□□□ 0.35
PSEN1-220ENST00000557037 HABP4Q5JVS0 413 aaKnown RBP17.23■□□□□ 0.35
PSEN1-220ENST00000557037 NBPF5PQ86XG9 351 aaPredicted RBP17.23■□□□□ 0.35
PSEN1-220ENST00000557037 GCC1Q96CN9 775 aa17.23■□□□□ 0.35
PSEN1-220ENST00000557037 HHIPL1Q96JK4 782 aa17.23■□□□□ 0.35
PSEN1-220ENST00000557037 CAMTA2O94983 1202 aa17.22■□□□□ 0.35
PSEN1-220ENST00000557037 NBPF15Q8N660 670 aa17.22■□□□□ 0.35
PSEN1-220ENST00000557037 NOGQ13253 232 aa17.21■□□□□ 0.35
PSEN1-220ENST00000557037 CDCA8Q53HL2 280 aa17.21■□□□□ 0.35
PSEN1-220ENST00000557037 MRC1P22897 1456 aa17.19■□□□□ 0.34
PSEN1-220ENST00000557037 TRPA1O75762 1119 aa17.19■□□□□ 0.34
PSEN1-220ENST00000557037 NPM2Q86SE8 214 aaKnown RBP17.19■□□□□ 0.34
PSEN1-220ENST00000557037 LARGE2Q8N3Y3 721 aa17.19■□□□□ 0.34
PSEN1-220ENST00000557037 BCORQ6W2J9 1755 aa17.18■□□□□ 0.34
PSEN1-220ENST00000557037 A1BGP04217 495 aa17.18■□□□□ 0.34
PSEN1-220ENST00000557037 IL6STP40189 918 aaPredicted RBP17.18■□□□□ 0.34
PSEN1-220ENST00000557037 HUNKP57058 714 aa17.18■□□□□ 0.34
PSEN1-220ENST00000557037 CTU1Q7Z7A3 348 aaKnown RBP17.18■□□□□ 0.34
PSEN1-220ENST00000557037 TTC5Q8N0Z6 440 aa17.18■□□□□ 0.34
PSEN1-220ENST00000557037 PSMD1Q99460 953 aa17.18■□□□□ 0.34
PSEN1-220ENST00000557037 ADARB2Q9NS39 739 aaKnown RBP17.18■□□□□ 0.34
PSEN1-220ENST00000557037 HPS5Q9UPZ3 1129 aa17.18■□□□□ 0.34
PSEN1-220ENST00000557037 KLRG2A4D1S0 409 aaPredicted RBP17.17■□□□□ 0.34
PSEN1-220ENST00000557037 FAM177BA6PVY3 158 aa17.17■□□□□ 0.34
PSEN1-220ENST00000557037 ZNF496Q96IT1 587 aaPredicted RBP17.17■□□□□ 0.34
PSEN1-220ENST00000557037 DZIP3Q86Y13 1208 aaKnown RBP17.16■□□□□ 0.34
PSEN1-220ENST00000557037 RNF186Q9NXI6 227 aa17.16■□□□□ 0.34
PSEN1-220ENST00000557037 SAGE1Q9NXZ1 904 aa17.16■□□□□ 0.34
PSEN1-220ENST00000557037 GPRC5DQ9NZD1 345 aa17.16■□□□□ 0.34
PSEN1-220ENST00000557037 SNED1Q8TER0 1413 aa17.15■□□□□ 0.34
PSEN1-220ENST00000557037 ALDH1B1P30837 517 aa17.15■□□□□ 0.34
PSEN1-220ENST00000557037 KIF23Q02241 960 aaPredicted RBP17.15■□□□□ 0.34
PSEN1-220ENST00000557037 DLK2Q6UY11 383 aa17.15■□□□□ 0.34
PSEN1-220ENST00000557037 SLC51AQ86UW1 340 aa17.15■□□□□ 0.34
PSEN1-220ENST00000557037 UBR2Q8IWV8 1755 aa17.15■□□□□ 0.34
PSEN1-220ENST00000557037 PIP4K2AP48426 406 aaPredicted RBP17.14■□□□□ 0.33
PSEN1-220ENST00000557037 NIM1KQ8IY84 436 aa17.14■□□□□ 0.33
PSEN1-220ENST00000557037 FAM155AB1AL88 458 aaPredicted RBP17.13■□□□□ 0.33
PSEN1-220ENST00000557037 TPTE2Q6XPS3 522 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms