RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 DDNO94850 711 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-245ENST00000556958 ITPK1Q13572 414 aa8.23□□□□□ -1.09
ATXN3-245ENST00000556958 PAXIP1Q6ZW49 1069 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-245ENST00000556958 PNMA8AQ86V59 439 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-245ENST00000556958 CAPNS2Q96L46 248 aa8.23□□□□□ -1.09
ATXN3-245ENST00000556958 TAF1DQ9H5J8 278 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-245ENST00000556958 TMOD3Q9NYL9 352 aa8.23□□□□□ -1.09
ATXN3-245ENST00000556958 TNRC6CQ9HCJ0 1690 aaKnown RBP8.22□□□□□ -1.09
ATXN3-245ENST00000556958 TK2O00142 265 aa8.22□□□□□ -1.09
ATXN3-245ENST00000556958 HOXC9P31274 260 aa8.22□□□□□ -1.09
ATXN3-245ENST00000556958 EAPPQ56P03 285 aaPredicted RBP8.22□□□□□ -1.09
ATXN3-245ENST00000556958 NBPF6Q5VWK0 638 aa8.22□□□□□ -1.09
ATXN3-245ENST00000556958 DMRTA1Q5VZB9 504 aa8.22□□□□□ -1.09
ATXN3-245ENST00000556958 HDGFL2Q7Z4V5 671 aaPredicted RBP8.22□□□□□ -1.09
ATXN3-245ENST00000556958 CNTROBQ8N137 903 aa8.22□□□□□ -1.09
ATXN3-245ENST00000556958 NBPF4Q96M43 638 aa8.22□□□□□ -1.09
ATXN3-245ENST00000556958 PCDHGA4Q9Y5G9 962 aa8.22□□□□□ -1.09
ATXN3-245ENST00000556958 KIAA1210Q9ULL0 1709 aa8.22□□□□□ -1.09
ATXN3-245ENST00000556958 PIK3C2AO00443 1686 aa8.21□□□□□ -1.09
ATXN3-245ENST00000556958 NFKBIEO00221 500 aa8.21□□□□□ -1.1
ATXN3-245ENST00000556958 CYP27B1O15528 508 aa8.21□□□□□ -1.1
ATXN3-245ENST00000556958 SOX10P56693 466 aa8.21□□□□□ -1.1
ATXN3-245ENST00000556958 NKX1-1Q15270 411 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-245ENST00000556958 HABP4Q5JVS0 413 aaKnown RBP8.21□□□□□ -1.1
ATXN3-245ENST00000556958 ASAP1Q9ULH1 1129 aa8.21□□□□□ -1.1
ATXN3-245ENST00000556958 TUBGCP6Q96RT7 1819 aa8.21□□□□□ -1.1
ATXN3-245ENST00000556958 MAP3K19Q56UN5 1328 aa8.21□□□□□ -1.1
ATXN3-245ENST00000556958 LY75O60449 1722 aa8.2□□□□□ -1.1
ATXN3-245ENST00000556958 CD163L1Q9NR16 1453 aa8.2□□□□□ -1.1
ATXN3-245ENST00000556958 H0YIN7 160 aa8.2□□□□□ -1.1
ATXN3-245ENST00000556958 DLL1O00548 723 aa8.2□□□□□ -1.1
ATXN3-245ENST00000556958 RIOK3O14730 519 aaKnown RBP8.2□□□□□ -1.1
ATXN3-245ENST00000556958 GRM1Q13255 1194 aa8.2□□□□□ -1.1
ATXN3-245ENST00000556958 RNF25Q96BH1 459 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-245ENST00000556958 TSKSQ9UJT2 592 aa8.2□□□□□ -1.1
ATXN3-245ENST00000556958 C2orf72A6NCS6 295 aa8.19□□□□□ -1.1
ATXN3-245ENST00000556958 TM4SF1P30408 202 aa8.19□□□□□ -1.1
ATXN3-245ENST00000556958 DDR1Q08345 913 aa8.19□□□□□ -1.1
ATXN3-245ENST00000556958 DDX21Q9NR30 783 aaKnown RBP eCLIP8.19□□□□□ -1.1
ATXN3-245ENST00000556958 ATG3Q9NT62 314 aa8.19□□□□□ -1.1
ATXN3-245ENST00000556958 HACL1Q9UJ83 578 aa8.19□□□□□ -1.1
ATXN3-245ENST00000556958 TAOK2Q9UL54 1235 aa8.19□□□□□ -1.1
ATXN3-245ENST00000556958 SPG7Q9UQ90 795 aa8.19□□□□□ -1.1
ATXN3-245ENST00000556958 C4BP0C0L5 1744 aa8.19□□□□□ -1.1
ATXN3-245ENST00000556958 MEGF6O75095 1541 aa8.19□□□□□ -1.1
ATXN3-245ENST00000556958 POLRMTO00411 1230 aaKnown RBP8.18□□□□□ -1.1
ATXN3-245ENST00000556958 ZPR1O75312 459 aa8.18□□□□□ -1.1
ATXN3-245ENST00000556958 PSEN2P49810 448 aa8.18□□□□□ -1.1
ATXN3-245ENST00000556958 CYP4F22Q6NT55 531 aa8.18□□□□□ -1.1
ATXN3-245ENST00000556958 C2CD5Q86YS7 1000 aa8.18□□□□□ -1.1
ATXN3-245ENST00000556958 USHBP1Q8N6Y0 703 aa8.18□□□□□ -1.1
ATXN3-245ENST00000556958 COG3Q96JB2 828 aa8.18□□□□□ -1.1
ATXN3-245ENST00000556958 TERF2IPQ9NYB0 399 aa8.18□□□□□ -1.1
ATXN3-245ENST00000556958 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-245ENST00000556958 PDZRN3Q9UPQ7 1066 aa8.18□□□□□ -1.1
ATXN3-245ENST00000556958 CNTNAP4Q9C0A0 1308 aa8.18□□□□□ -1.1
ATXN3-245ENST00000556958 SMG6Q86US8 1419 aaKnown RBP8.18□□□□□ -1.1
ATXN3-245ENST00000556958 EPHX2P34913 555 aa8.17□□□□□ -1.1
ATXN3-245ENST00000556958 BRPF1P55201 1214 aaPredicted RBP8.17□□□□□ -1.1
ATXN3-245ENST00000556958 PLCB2Q00722 1185 aa8.17□□□□□ -1.1
ATXN3-245ENST00000556958 MAP1SQ66K74 1059 aaPredicted RBP8.17□□□□□ -1.1
ATXN3-245ENST00000556958 TMC1Q8TDI8 760 aa8.17□□□□□ -1.1
ATXN3-245ENST00000556958 BBXQ8WY36 941 aaPredicted RBP8.17□□□□□ -1.1
ATXN3-245ENST00000556958 TAOK3Q9H2K8 898 aa8.17□□□□□ -1.1
ATXN3-245ENST00000556958 LTBP3Q9NS15 1303 aa8.17□□□□□ -1.1
ATXN3-245ENST00000556958 C21orf2O43822 256 aa8.16□□□□□ -1.1
ATXN3-245ENST00000556958 SOGA3Q5TF21 947 aa8.16□□□□□ -1.1
ATXN3-245ENST00000556958 USP54Q70EL1 1684 aa8.16□□□□□ -1.1
ATXN3-245ENST00000556958 ZNF622Q969S3 477 aaKnown RBP eCLIP8.16□□□□□ -1.1
ATXN3-245ENST00000556958 USP42Q9H9J4 1324 aaKnown RBP8.16□□□□□ -1.1
ATXN3-245ENST00000556958 SRP68Q9UHB9 627 aaKnown RBP8.16□□□□□ -1.1
ATXN3-245ENST00000556958 SBNO2Q9Y2G9 1366 aa8.16□□□□□ -1.1
ATXN3-245ENST00000556958 C5P01031 1676 aa8.15□□□□□ -1.1
ATXN3-245ENST00000556958 TLL2Q9Y6L7 1015 aa8.15□□□□□ -1.1
ATXN3-245ENST00000556958 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-245ENST00000556958 AOC2O75106 756 aa8.14□□□□□ -1.11
ATXN3-245ENST00000556958 SERPINB2P05120 415 aa8.14□□□□□ -1.11
ATXN3-245ENST00000556958 PTPN5P54829 565 aa8.14□□□□□ -1.11
ATXN3-245ENST00000556958 IFNL2Q8IZJ0 200 aa8.14□□□□□ -1.11
ATXN3-245ENST00000556958 SLC17A8Q8NDX2 589 aa8.14□□□□□ -1.11
ATXN3-245ENST00000556958 HHIPL1Q96JK4 782 aa8.14□□□□□ -1.11
ATXN3-245ENST00000556958 ZFP91Q96JP5 570 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-245ENST00000556958 EDC4Q6P2E9 1401 aaKnown RBP8.13□□□□□ -1.11
ATXN3-245ENST00000556958 N4BP2Q86UW6 1770 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-245ENST00000556958 PKD1L3Q7Z443 1732 aa8.13□□□□□ -1.11
ATXN3-245ENST00000556958 DOT1LQ8TEK3 1739 aa8.13□□□□□ -1.11
ATXN3-245ENST00000556958 PDE6BP35913 854 aa8.13□□□□□ -1.11
ATXN3-245ENST00000556958 CRKLP46109 303 aaKnown RBP8.13□□□□□ -1.11
ATXN3-245ENST00000556958 FBXO22Q8NEZ5 403 aa8.13□□□□□ -1.11
ATXN3-245ENST00000556958 SLC4A9Q96Q91 983 aa8.13□□□□□ -1.11
ATXN3-245ENST00000556958 SLC12A5Q9H2X9 1139 aa8.13□□□□□ -1.11
ATXN3-245ENST00000556958 TNRC18O15417 2968 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-245ENST00000556958 KIF13BQ9NQT8 1826 aa8.13□□□□□ -1.11
ATXN3-245ENST00000556958 RGPD5Q99666 1765 aa8.12□□□□□ -1.11
ATXN3-245ENST00000556958 RTL1A6NKG5 1358 aa8.12□□□□□ -1.11
ATXN3-245ENST00000556958 QRICH2Q9H0J4 1663 aa8.12□□□□□ -1.11
ATXN3-245ENST00000556958 ERVV-2B6SEH9 535 aa8.12□□□□□ -1.11
ATXN3-245ENST00000556958 STK25O00506 426 aa8.12□□□□□ -1.11
ATXN3-245ENST00000556958 FXR1P51114 621 aaKnown RBP eCLIP8.12□□□□□ -1.11
ATXN3-245ENST00000556958 NOGQ13253 232 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms