RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 CAMTA2O94983 1202 aa12.19□□□□□ -0.46
HNRNPC-227ENST00000556897 SRGNP10124 158 aa12.19□□□□□ -0.46
HNRNPC-227ENST00000556897 STYK1Q6J9G0 422 aa12.19□□□□□ -0.46
HNRNPC-227ENST00000556897 PRPF40BQ6NWY9 871 aaKnown RBP12.19□□□□□ -0.46
HNRNPC-227ENST00000556897 CNKSR1Q969H4 720 aa12.19□□□□□ -0.46
HNRNPC-227ENST00000556897 SLX4Q8IY92 1834 aa12.18□□□□□ -0.46
HNRNPC-227ENST00000556897 U2SURPO15042 1029 aaKnown RBP12.18□□□□□ -0.46
HNRNPC-227ENST00000556897 PER1O15534 1290 aaPredicted RBP12.18□□□□□ -0.46
HNRNPC-227ENST00000556897 ST5P78524 1137 aa12.18□□□□□ -0.46
HNRNPC-227ENST00000556897 NPM2Q86SE8 214 aaKnown RBP12.18□□□□□ -0.46
HNRNPC-227ENST00000556897 GAS2L2Q8NHY3 880 aa12.18□□□□□ -0.46
HNRNPC-227ENST00000556897 FMNL2Q96PY5 1086 aa12.18□□□□□ -0.46
HNRNPC-227ENST00000556897 KCNQ3O43525 872 aa12.17□□□□□ -0.46
HNRNPC-227ENST00000556897 HOXD11P31277 338 aaPredicted RBP12.17□□□□□ -0.46
HNRNPC-227ENST00000556897 CNGB1Q14028 1251 aaPredicted RBP12.17□□□□□ -0.46
HNRNPC-227ENST00000556897 SOGA3Q5TF21 947 aa12.17□□□□□ -0.46
HNRNPC-227ENST00000556897 DZIP3Q86Y13 1208 aaKnown RBP12.17□□□□□ -0.46
HNRNPC-227ENST00000556897 MASTLQ96GX5 879 aa12.17□□□□□ -0.46
HNRNPC-227ENST00000556897 COL3A1P02461 1466 aaPredicted RBP12.16□□□□□ -0.46
HNRNPC-227ENST00000556897 SIPA1L3O60292 1781 aaPredicted RBP12.16□□□□□ -0.46
HNRNPC-227ENST00000556897 IQCA1LA6NCM1 817 aa12.16□□□□□ -0.46
HNRNPC-227ENST00000556897 PIP4K2AP48426 406 aaPredicted RBP12.16□□□□□ -0.46
HNRNPC-227ENST00000556897 CACNA1SQ13698 1873 aa12.16□□□□□ -0.46
HNRNPC-227ENST00000556897 PASKQ96RG2 1323 aa12.15□□□□□ -0.46
HNRNPC-227ENST00000556897 BTBD11A6QL63 1104 aa12.15□□□□□ -0.46
HNRNPC-227ENST00000556897 LDHDQ86WU2 507 aa12.15□□□□□ -0.46
HNRNPC-227ENST00000556897 NBPF5PQ86XG9 351 aaPredicted RBP12.15□□□□□ -0.46
HNRNPC-227ENST00000556897 C7orf43Q8WVR3 580 aa12.15□□□□□ -0.46
HNRNPC-227ENST00000556897 TAF1DQ9H5J8 278 aaPredicted RBP12.15□□□□□ -0.46
HNRNPC-227ENST00000556897 USP16Q9Y5T5 823 aa12.15□□□□□ -0.46
HNRNPC-227ENST00000556897 CNTNAP1P78357 1384 aa12.15□□□□□ -0.46
HNRNPC-227ENST00000556897 CEMIPQ8WUJ3 1361 aa12.15□□□□□ -0.46
HNRNPC-227ENST00000556897 PRAMEF22A3QJZ6 481 aa12.14□□□□□ -0.47
HNRNPC-227ENST00000556897 FOXN1O15353 648 aa12.14□□□□□ -0.47
HNRNPC-227ENST00000556897 CCDC93Q567U6 631 aa12.14□□□□□ -0.47
HNRNPC-227ENST00000556897 L3MBTL3Q96JM7 780 aaPredicted RBP12.14□□□□□ -0.47
HNRNPC-227ENST00000556897 PHACTR3Q96KR7 559 aa12.14□□□□□ -0.47
HNRNPC-227ENST00000556897 ZNF541Q9H0D2 1346 aa12.13□□□□□ -0.47
HNRNPC-227ENST00000556897 BCORQ6W2J9 1755 aa12.13□□□□□ -0.47
HNRNPC-227ENST00000556897 ARFGEF2Q9Y6D5 1785 aa12.13□□□□□ -0.47
HNRNPC-227ENST00000556897 NPR1P16066 1061 aa12.13□□□□□ -0.47
HNRNPC-227ENST00000556897 EAPPQ56P03 285 aaPredicted RBP12.13□□□□□ -0.47
HNRNPC-227ENST00000556897 OLFM4Q6UX06 510 aa12.13□□□□□ -0.47
HNRNPC-227ENST00000556897 CLEC4GQ6UXB4 293 aa12.13□□□□□ -0.47
HNRNPC-227ENST00000556897 ZNF277Q9NRM2 450 aaPredicted RBP12.13□□□□□ -0.47
HNRNPC-227ENST00000556897 SCN4AP35499 1836 aa12.12□□□□□ -0.47
HNRNPC-227ENST00000556897 TMEM88BA6NKF7 163 aa12.12□□□□□ -0.47
HNRNPC-227ENST00000556897 ITGBL1O95965 494 aaPredicted RBP12.12□□□□□ -0.47
HNRNPC-227ENST00000556897 PRKAR2BP31323 418 aa12.12□□□□□ -0.47
HNRNPC-227ENST00000556897 VEGFBP49765 207 aa12.12□□□□□ -0.47
HNRNPC-227ENST00000556897 CCER1Q8TC90 406 aaPredicted RBP12.12□□□□□ -0.47
HNRNPC-227ENST00000556897 ZNF652Q9Y2D9 606 aa12.12□□□□□ -0.47
HNRNPC-227ENST00000556897 KLRG2A4D1S0 409 aaPredicted RBP12.11□□□□□ -0.47
HNRNPC-227ENST00000556897 SNRPA1P09661 255 aaKnown RBP12.11□□□□□ -0.47
HNRNPC-227ENST00000556897 FKBP4Q02790 459 aaKnown RBP eCLIP12.11□□□□□ -0.47
HNRNPC-227ENST00000556897 TPTE2Q6XPS3 522 aa12.11□□□□□ -0.47
HNRNPC-227ENST00000556897 AIDAQ96BJ3 306 aa12.11□□□□□ -0.47
HNRNPC-227ENST00000556897 PRDM10Q9NQV6 1147 aa12.11□□□□□ -0.47
HNRNPC-227ENST00000556897 HACL1Q9UJ83 578 aa12.11□□□□□ -0.47
HNRNPC-227ENST00000556897 NIP7Q9Y221 180 aaKnown RBP eCLIP12.11□□□□□ -0.47
HNRNPC-227ENST00000556897 CLEC11AQ9Y240 323 aa12.11□□□□□ -0.47
HNRNPC-227ENST00000556897 NPC1L1Q9UHC9 1359 aa12.1□□□□□ -0.47
HNRNPC-227ENST00000556897 FAM177BA6PVY3 158 aa12.1□□□□□ -0.47
HNRNPC-227ENST00000556897 NBPF26B4DH59 902 aa12.1□□□□□ -0.47
HNRNPC-227ENST00000556897 EPHX2P34913 555 aa12.1□□□□□ -0.47
HNRNPC-227ENST00000556897 CTCFP49711 727 aaPredicted RBP12.1□□□□□ -0.47
HNRNPC-227ENST00000556897 NBPF10Q6P3W6 841 aaKnown RBP12.1□□□□□ -0.47
HNRNPC-227ENST00000556897 MCM10Q7L590 875 aa12.1□□□□□ -0.47
HNRNPC-227ENST00000556897 RTKN2Q8IZC4 609 aa12.1□□□□□ -0.47
HNRNPC-227ENST00000556897 NBPF15Q8N660 670 aa12.1□□□□□ -0.47
HNRNPC-227ENST00000556897 RSPH6AQ9H0K4 717 aa12.1□□□□□ -0.47
HNRNPC-227ENST00000556897 FOXD4L1Q9NU39 408 aa12.1□□□□□ -0.47
HNRNPC-227ENST00000556897 RNF123Q5XPI4 1314 aa12.1□□□□□ -0.47
HNRNPC-227ENST00000556897 MAP1SQ66K74 1059 aaPredicted RBP12.09□□□□□ -0.47
HNRNPC-227ENST00000556897 WBP1LQ9NX94 342 aa12.09□□□□□ -0.47
HNRNPC-227ENST00000556897 FZD9O00144 591 aa12.08□□□□□ -0.48
HNRNPC-227ENST00000556897 IARSP41252 1262 aaKnown RBP12.08□□□□□ -0.48
HNRNPC-227ENST00000556897 LBX1P52954 281 aa12.08□□□□□ -0.48
HNRNPC-227ENST00000556897 HLFQ16534 295 aa12.08□□□□□ -0.48
HNRNPC-227ENST00000556897 PNMA8AQ86V59 439 aaPredicted RBP12.08□□□□□ -0.48
HNRNPC-227ENST00000556897 CNTROBQ8N137 903 aa12.08□□□□□ -0.48
HNRNPC-227ENST00000556897 SYNE4Q8N205 404 aa12.08□□□□□ -0.48
HNRNPC-227ENST00000556897 RTF1Q92541 710 aaKnown RBP12.08□□□□□ -0.48
HNRNPC-227ENST00000556897 ADAMTSL1Q8N6G6 1762 aa12.07□□□□□ -0.48
HNRNPC-227ENST00000556897 RGL2O15211 777 aa12.07□□□□□ -0.48
HNRNPC-227ENST00000556897 GTF2E1P29083 439 aaPredicted RBP12.07□□□□□ -0.48
HNRNPC-227ENST00000556897 ALDH1B1P30837 517 aa12.07□□□□□ -0.48
HNRNPC-227ENST00000556897 DCTN1Q14203 1278 aa12.07□□□□□ -0.48
HNRNPC-227ENST00000556897 GPC2Q8N158 579 aa12.07□□□□□ -0.48
HNRNPC-227ENST00000556897 CFAP53Q96M91 514 aa12.07□□□□□ -0.48
HNRNPC-227ENST00000556897 RASSF10A6NK89 507 aa12.06□□□□□ -0.48
HNRNPC-227ENST00000556897 U2AF1L5P0DN76 240 aaPredicted RBP12.06□□□□□ -0.48
HNRNPC-227ENST00000556897 U2AF1Q01081 240 aaKnown RBP eCLIP12.06□□□□□ -0.48
HNRNPC-227ENST00000556897 DEFB115Q30KQ5 88 aa12.06□□□□□ -0.48
HNRNPC-227ENST00000556897 JDP2Q8WYK2 163 aa12.06□□□□□ -0.48
HNRNPC-227ENST00000556897 ABT1Q9ULW3 272 aaKnown RBP12.06□□□□□ -0.48
HNRNPC-227ENST00000556897 ABCC12Q96J65 1359 aa12.05□□□□□ -0.48
HNRNPC-227ENST00000556897 CRY2Q49AN0 593 aa12.05□□□□□ -0.48
HNRNPC-227ENST00000556897 NUTM1Q86Y26 1132 aa12.05□□□□□ -0.48
HNRNPC-227ENST00000556897 NGEFQ8N5V2 710 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms