RNA–Protein interactions for RNA: ENST00000556876.1

CHGA-206, Transcript of chromogranin A, humanhuman

TSL 2

Gene CHGA, Length 912 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-206ENST00000556876 AFDNP55196 1824 aaKnown RBP22.7■■□□□ 1.22
CHGA-206ENST00000556876 VIRMAQ69YN4 1812 aaKnown RBP22.7■■□□□ 1.22
CHGA-206ENST00000556876 NPR1P16066 1061 aa22.69■■□□□ 1.22
CHGA-206ENST00000556876 DCTN1Q14203 1278 aa22.68■■□□□ 1.22
CHGA-206ENST00000556876 KLRG1Q96E93 195 aa22.68■■□□□ 1.22
CHGA-206ENST00000556876 NIP7Q9Y221 180 aaKnown RBP eCLIP22.68■■□□□ 1.22
CHGA-206ENST00000556876 SIPA1L3O60292 1781 aaPredicted RBP22.68■■□□□ 1.22
CHGA-206ENST00000556876 KLRG2A4D1S0 409 aaPredicted RBP22.67■■□□□ 1.22
CHGA-206ENST00000556876 ERVV-1B6SEH8 477 aa22.67■■□□□ 1.22
CHGA-206ENST00000556876 PRPF40BQ6NWY9 871 aaKnown RBP22.67■■□□□ 1.22
CHGA-206ENST00000556876 GTF2E1P29083 439 aaPredicted RBP22.66■■□□□ 1.22
CHGA-206ENST00000556876 ALDH1B1P30837 517 aa22.66■■□□□ 1.22
CHGA-206ENST00000556876 NYXQ9GZU5 481 aa22.66■■□□□ 1.22
CHGA-206ENST00000556876 SCN7AQ01118 1682 aa22.65■■□□□ 1.22
CHGA-206ENST00000556876 MAPK8IP3Q9UPT6 1336 aa22.65■■□□□ 1.22
CHGA-206ENST00000556876 PRAMEF22A3QJZ6 481 aa22.65■■□□□ 1.22
CHGA-206ENST00000556876 PRELPP51888 382 aa22.65■■□□□ 1.22
CHGA-206ENST00000556876 NFE2L2Q16236 605 aa22.65■■□□□ 1.22
CHGA-206ENST00000556876 CCDC93Q567U6 631 aa22.65■■□□□ 1.22
CHGA-206ENST00000556876 CCDC24Q8N4L8 307 aa22.65■■□□□ 1.22
CHGA-206ENST00000556876 DLEC1Q9Y238 1755 aa22.64■■□□□ 1.22
CHGA-206ENST00000556876 NBPF26B4DH59 902 aa22.64■■□□□ 1.21
CHGA-206ENST00000556876 NBPF10Q6P3W6 841 aaKnown RBP22.64■■□□□ 1.21
CHGA-206ENST00000556876 RTKN2Q8IZC4 609 aa22.64■■□□□ 1.21
CHGA-206ENST00000556876 NBPF15Q8N660 670 aa22.64■■□□□ 1.21
CHGA-206ENST00000556876 ZNF219Q9P2Y4 722 aaPredicted RBP22.64■■□□□ 1.21
CHGA-206ENST00000556876 TNRC6CQ9HCJ0 1690 aaKnown RBP22.64■■□□□ 1.21
CHGA-206ENST00000556876 SBF1O95248 1867 aa22.63■■□□□ 1.21
CHGA-206ENST00000556876 JMYQ8N9B5 988 aa22.63■■□□□ 1.21
CHGA-206ENST00000556876 PLEKHF1Q96S99 279 aa22.63■■□□□ 1.21
CHGA-206ENST00000556876 IQCA1LA6NCM1 817 aa22.62■■□□□ 1.21
CHGA-206ENST00000556876 PIP4K2AP48426 406 aaPredicted RBP22.62■■□□□ 1.21
CHGA-206ENST00000556876 RALBP1Q15311 655 aa22.62■■□□□ 1.21
CHGA-206ENST00000556876 GRIPAP1Q4V328 841 aa22.62■■□□□ 1.21
CHGA-206ENST00000556876 KIF6Q6ZMV9 814 aa22.62■■□□□ 1.21
CHGA-206ENST00000556876 BABAM1Q9NWV8 329 aa22.62■■□□□ 1.21
CHGA-206ENST00000556876 ERBB4Q15303 1308 aa22.61■■□□□ 1.21
CHGA-206ENST00000556876 C7orf43Q8WVR3 580 aa22.61■■□□□ 1.21
CHGA-206ENST00000556876 EIF4A1P60842 406 aaKnown RBP22.6■■□□□ 1.21
CHGA-206ENST00000556876 CC2D2BQ6DHV5 1058 aa22.6■■□□□ 1.21
CHGA-206ENST00000556876 MIS18AQ9NYP9 233 aa22.6■■□□□ 1.21
CHGA-206ENST00000556876 FKBP4Q02790 459 aaKnown RBP eCLIP22.59■■□□□ 1.21
CHGA-206ENST00000556876 LMOD3Q0VAK6 560 aa22.59■■□□□ 1.21
CHGA-206ENST00000556876 MAP3K15Q6ZN16 1313 aa22.57■■□□□ 1.2
CHGA-206ENST00000556876 POTECB2RU33 542 aa22.57■■□□□ 1.2
CHGA-206ENST00000556876 HLFQ16534 295 aa22.57■■□□□ 1.2
CHGA-206ENST00000556876 RRP7AQ9Y3A4 280 aaKnown RBP22.56■■□□□ 1.2
CHGA-206ENST00000556876 CRY2Q49AN0 593 aa22.55■■□□□ 1.2
CHGA-206ENST00000556876 CHADLQ6NUI6 762 aa22.55■■□□□ 1.2
CHGA-206ENST00000556876 L3MBTL3Q96JM7 780 aaPredicted RBP22.55■■□□□ 1.2
CHGA-206ENST00000556876 IBTKQ9P2D0 1353 aaPredicted RBP22.54■■□□□ 1.2
CHGA-206ENST00000556876 NGEFQ8N5V2 710 aa22.54■■□□□ 1.2
CHGA-206ENST00000556876 TMX4Q9H1E5 349 aaPredicted RBP22.54■■□□□ 1.2
CHGA-206ENST00000556876 TSPYL4Q9UJ04 414 aa22.54■■□□□ 1.2
CHGA-206ENST00000556876 ANKRD31Q8N7Z5 1873 aa22.54■■□□□ 1.2
CHGA-206ENST00000556876 FAM177BA6PVY3 158 aa22.53■■□□□ 1.2
CHGA-206ENST00000556876 DDNO94850 711 aaPredicted RBP22.53■■□□□ 1.2
CHGA-206ENST00000556876 HTRA3P83110 453 aa22.53■■□□□ 1.2
CHGA-206ENST00000556876 PARP10Q53GL7 1025 aa22.53■■□□□ 1.2
CHGA-206ENST00000556876 PPP1R42Q7Z4L9 355 aa22.53■■□□□ 1.2
CHGA-206ENST00000556876 RPGRQ92834 1020 aaKnown RBP22.53■■□□□ 1.2
CHGA-206ENST00000556876 PSMD1Q99460 953 aa22.53■■□□□ 1.2
CHGA-206ENST00000556876 BCORQ6W2J9 1755 aa22.53■■□□□ 1.2
CHGA-206ENST00000556876 WDR90Q96KV7 1748 aa22.52■■□□□ 1.2
CHGA-206ENST00000556876 MYL6BP14649 208 aa22.52■■□□□ 1.2
CHGA-206ENST00000556876 HOXA10P31260 410 aaPredicted RBP22.52■■□□□ 1.2
CHGA-206ENST00000556876 RIPK4P57078 832 aa22.52■■□□□ 1.2
CHGA-206ENST00000556876 LDHDQ86WU2 507 aa22.52■■□□□ 1.2
CHGA-206ENST00000556876 GIGYF2Q6Y7W6 1299 aaKnown RBP22.51■■□□□ 1.19
CHGA-206ENST00000556876 JDP2Q8WYK2 163 aa22.51■■□□□ 1.19
CHGA-206ENST00000556876 CREBZFQ9NS37 354 aa22.51■■□□□ 1.19
CHGA-206ENST00000556876 FER1L6Q2WGJ9 1857 aa22.5■■□□□ 1.19
CHGA-206ENST00000556876 PNMA8AQ86V59 439 aaPredicted RBP22.5■■□□□ 1.19
CHGA-206ENST00000556876 RBM17Q96I25 401 aaKnown RBP22.5■■□□□ 1.19
CHGA-206ENST00000556876 RIC1Q4ADV7 1423 aa22.49■■□□□ 1.19
CHGA-206ENST00000556876 IARSP41252 1262 aaKnown RBP22.49■■□□□ 1.19
CHGA-206ENST00000556876 HSP90AB3PQ58FF7 597 aa22.49■■□□□ 1.19
CHGA-206ENST00000556876 TTLL7Q6ZT98 887 aa22.49■■□□□ 1.19
CHGA-206ENST00000556876 ZNF34Q8IZ26 560 aa22.49■■□□□ 1.19
CHGA-206ENST00000556876 SYNE4Q8N205 404 aa22.49■■□□□ 1.19
CHGA-206ENST00000556876 CRAMP1Q96RY5 1269 aa22.49■■□□□ 1.19
CHGA-206ENST00000556876 ZNF277Q9NRM2 450 aaPredicted RBP22.49■■□□□ 1.19
CHGA-206ENST00000556876 RNF123Q5XPI4 1314 aa22.49■■□□□ 1.19
CHGA-206ENST00000556876 NLRP3Q96P20 1036 aa22.48■■□□□ 1.19
CHGA-206ENST00000556876 THUMPD2Q9BTF0 503 aaKnown RBP22.48■■□□□ 1.19
CHGA-206ENST00000556876 ZBTB3Q9H5J0 574 aa22.48■■□□□ 1.19
CHGA-206ENST00000556876 TAF1DQ9H5J8 278 aaPredicted RBP22.48■■□□□ 1.19
CHGA-206ENST00000556876 HACL1Q9UJ83 578 aa22.48■■□□□ 1.19
CHGA-206ENST00000556876 COL11A2P13942 1736 aaPredicted RBP22.48■■□□□ 1.19
CHGA-206ENST00000556876 SLX4Q8IY92 1834 aa22.47■■□□□ 1.19
CHGA-206ENST00000556876 FZD9O00144 591 aa22.47■■□□□ 1.19
CHGA-206ENST00000556876 TMPOP42166 694 aaKnown RBP22.47■■□□□ 1.19
CHGA-206ENST00000556876 NUTM1Q86Y26 1132 aa22.47■■□□□ 1.19
CHGA-206ENST00000556876 GPC2Q8N158 579 aa22.47■■□□□ 1.19
CHGA-206ENST00000556876 VPS33BQ9H267 617 aa22.47■■□□□ 1.19
CHGA-206ENST00000556876 TIAM2Q8IVF5 1701 aa22.46■■□□□ 1.19
CHGA-206ENST00000556876 GPTP24298 496 aa22.45■■□□□ 1.18
CHGA-206ENST00000556876 EIF6P56537 245 aaKnown RBP22.45■■□□□ 1.18
CHGA-206ENST00000556876 SUSD4Q5VX71 490 aa22.45■■□□□ 1.18
CHGA-206ENST00000556876 UTP14AQ9BVJ6 771 aaKnown RBP22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms