RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 NEXNQ0ZGT2 675 aa13.57□□□□□ -0.24
LINC01550-206ENST00000556462 MYD88Q99836 296 aa13.57□□□□□ -0.24
LINC01550-206ENST00000556462 LRRFIP2Q9Y608 721 aaKnown RBP13.57□□□□□ -0.24
LINC01550-206ENST00000556462 EP400Q96L91 3159 aa13.57□□□□□ -0.24
LINC01550-206ENST00000556462 INTS5Q6P9B9 1019 aaKnown RBP13.57□□□□□ -0.24
LINC01550-206ENST00000556462 TJP1Q07157 1748 aa13.57□□□□□ -0.24
LINC01550-206ENST00000556462 UTYO14607 1347 aa13.56□□□□□ -0.24
LINC01550-206ENST00000556462 GCC1Q96CN9 775 aa13.56□□□□□ -0.24
LINC01550-206ENST00000556462 DCTPP1Q9H773 170 aa13.56□□□□□ -0.24
LINC01550-206ENST00000556462 GRM8O00222 908 aa13.55□□□□□ -0.24
LINC01550-206ENST00000556462 IL6STP40189 918 aaPredicted RBP13.55□□□□□ -0.24
LINC01550-206ENST00000556462 ATP8B2P98198 1209 aa13.55□□□□□ -0.24
LINC01550-206ENST00000556462 GCKRQ14397 625 aa13.55□□□□□ -0.24
LINC01550-206ENST00000556462 KRT27Q7Z3Y8 459 aa13.55□□□□□ -0.24
LINC01550-206ENST00000556462 ZBTB3Q9H5J0 574 aa13.55□□□□□ -0.24
LINC01550-206ENST00000556462 C9orf78Q9NZ63 289 aaPredicted RBP13.55□□□□□ -0.24
LINC01550-206ENST00000556462 PNMA6EA0A0J9YXQ4 647 aa13.55□□□□□ -0.24
LINC01550-206ENST00000556462 ATP5J2-PTCD1G3V325 749 aa13.55□□□□□ -0.24
LINC01550-206ENST00000556462 CRKLP46109 303 aaKnown RBP13.55□□□□□ -0.24
LINC01550-206ENST00000556462 RGS17Q9UGC6 210 aaPredicted RBP13.55□□□□□ -0.24
LINC01550-206ENST00000556462 ZNF330Q9Y3S2 320 aaPredicted RBP13.55□□□□□ -0.24
LINC01550-206ENST00000556462 NHSQ6T4R5 1651 aa13.55□□□□□ -0.24
LINC01550-206ENST00000556462 NUCB1Q02818 461 aa13.54□□□□□ -0.24
LINC01550-206ENST00000556462 CCDC87Q9NVE4 849 aa13.54□□□□□ -0.24
LINC01550-206ENST00000556462 CICQ96RK0 1608 aaPredicted RBP13.54□□□□□ -0.24
LINC01550-206ENST00000556462 RGS3P49796 1198 aa13.54□□□□□ -0.24
LINC01550-206ENST00000556462 EIF5P55010 431 aaKnown RBP13.54□□□□□ -0.24
LINC01550-206ENST00000556462 BCL11BQ9C0K0 894 aaPredicted RBP13.54□□□□□ -0.24
LINC01550-206ENST00000556462 ARFGEF2Q9Y6D5 1785 aa13.53□□□□□ -0.24
LINC01550-206ENST00000556462 KCNQ4P56696 695 aa13.53□□□□□ -0.24
LINC01550-206ENST00000556462 FAM196AQ6ZSG2 479 aa13.53□□□□□ -0.24
LINC01550-206ENST00000556462 KAZALD1Q96I82 304 aa13.53□□□□□ -0.24
LINC01550-206ENST00000556462 MAP3K15Q6ZN16 1313 aa13.53□□□□□ -0.24
LINC01550-206ENST00000556462 BTAF1O14981 1849 aa13.53□□□□□ -0.24
LINC01550-206ENST00000556462 SBF2Q86WG5 1849 aa13.53□□□□□ -0.24
LINC01550-206ENST00000556462 HMMRO75330 724 aa13.52□□□□□ -0.24
LINC01550-206ENST00000556462 LINC00116Q8NCU8 138 aa13.52□□□□□ -0.24
LINC01550-206ENST00000556462 ZNF831Q5JPB2 1677 aa13.52□□□□□ -0.24
LINC01550-206ENST00000556462 RXRBP28702 533 aa13.52□□□□□ -0.25
LINC01550-206ENST00000556462 TCIRG1Q13488 830 aa13.52□□□□□ -0.25
LINC01550-206ENST00000556462 KIF6Q6ZMV9 814 aa13.52□□□□□ -0.25
LINC01550-206ENST00000556462 PPP1R42Q7Z4L9 355 aa13.52□□□□□ -0.25
LINC01550-206ENST00000556462 CHD1LQ86WJ1 897 aa13.52□□□□□ -0.25
LINC01550-206ENST00000556462 SSH3Q8TE77 659 aa13.52□□□□□ -0.25
LINC01550-206ENST00000556462 SUCLG2Q96I99 432 aa13.52□□□□□ -0.25
LINC01550-206ENST00000556462 ISCA1Q9BUE6 129 aa13.52□□□□□ -0.25
LINC01550-206ENST00000556462 BRWD3Q6RI45 1802 aa13.52□□□□□ -0.25
LINC01550-206ENST00000556462 PDE4AP27815 886 aa13.51□□□□□ -0.25
LINC01550-206ENST00000556462 TRIM28Q13263 835 aaKnown RBP13.51□□□□□ -0.25
LINC01550-206ENST00000556462 MTX1Q13505 466 aa13.51□□□□□ -0.25
LINC01550-206ENST00000556462 HLFQ16534 295 aa13.51□□□□□ -0.25
LINC01550-206ENST00000556462 ANKRD45Q5TZF3 282 aa13.51□□□□□ -0.25
LINC01550-206ENST00000556462 GIGYF2Q6Y7W6 1299 aaKnown RBP13.51□□□□□ -0.25
LINC01550-206ENST00000556462 TSHZ2Q9NRE2 1034 aa13.51□□□□□ -0.25
LINC01550-206ENST00000556462 HDAC5Q9UQL6 1122 aa13.51□□□□□ -0.25
LINC01550-206ENST00000556462 NUP188Q5SRE5 1749 aa13.51□□□□□ -0.25
LINC01550-206ENST00000556462 MYH14Q7Z406 1995 aaKnown RBP13.51□□□□□ -0.25
LINC01550-206ENST00000556462 A0A087WZG4 1122 aa13.51□□□□□ -0.25
LINC01550-206ENST00000556462 CASP7P55210 303 aa13.51□□□□□ -0.25
LINC01550-206ENST00000556462 POLA2Q14181 598 aa13.51□□□□□ -0.25
LINC01550-206ENST00000556462 DZIP3Q86Y13 1208 aaKnown RBP13.51□□□□□ -0.25
LINC01550-206ENST00000556462 CCDC191Q8NCU4 936 aa13.51□□□□□ -0.25
LINC01550-206ENST00000556462 ARXQ96QS3 562 aa13.51□□□□□ -0.25
LINC01550-206ENST00000556462 TBC1D2BQ9UPU7 963 aa13.51□□□□□ -0.25
LINC01550-206ENST00000556462 ERVV-1B6SEH8 477 aa13.5□□□□□ -0.25
LINC01550-206ENST00000556462 H7C1W4 665 aa13.5□□□□□ -0.25
LINC01550-206ENST00000556462 POTEAQ6S8J7 498 aa13.5□□□□□ -0.25
LINC01550-206ENST00000556462 JARID2Q92833 1246 aaPredicted RBP13.5□□□□□ -0.25
LINC01550-206ENST00000556462 LNPKQ9C0E8 428 aa13.5□□□□□ -0.25
LINC01550-206ENST00000556462 RREB1Q92766 1687 aa13.49□□□□□ -0.25
LINC01550-206ENST00000556462 BICC1Q9H694 974 aaKnown RBP13.49□□□□□ -0.25
LINC01550-206ENST00000556462 CWC25Q9NXE8 425 aaPredicted RBP13.49□□□□□ -0.25
LINC01550-206ENST00000556462 SRGAP3O43295 1099 aa13.49□□□□□ -0.25
LINC01550-206ENST00000556462 TRIM37O94972 964 aa13.49□□□□□ -0.25
LINC01550-206ENST00000556462 EPHA10Q5JZY3 1008 aa13.49□□□□□ -0.25
LINC01550-206ENST00000556462 UBE3BQ7Z3V4 1068 aa13.49□□□□□ -0.25
LINC01550-206ENST00000556462 NPM2Q86SE8 214 aaKnown RBP13.49□□□□□ -0.25
LINC01550-206ENST00000556462 CCNL1Q9UK58 526 aaPredicted RBP13.49□□□□□ -0.25
LINC01550-206ENST00000556462 CNTNAP4Q9C0A0 1308 aa13.49□□□□□ -0.25
LINC01550-206ENST00000556462 COL5A3P25940 1745 aaPredicted RBP13.48□□□□□ -0.25
LINC01550-206ENST00000556462 RC3H1Q5TC82 1133 aaKnown RBP13.48□□□□□ -0.25
LINC01550-206ENST00000556462 EXOC6BQ9Y2D4 811 aa13.48□□□□□ -0.25
LINC01550-206ENST00000556462 COL15A1P39059 1388 aa13.48□□□□□ -0.25
LINC01550-206ENST00000556462 CAMTA2O94983 1202 aa13.47□□□□□ -0.25
LINC01550-206ENST00000556462 HSP90AB3PQ58FF7 597 aa13.47□□□□□ -0.25
LINC01550-206ENST00000556462 LRRC4BQ9NT99 713 aa13.47□□□□□ -0.25
LINC01550-206ENST00000556462 RABL6Q3YEC7 729 aaPredicted RBP13.46□□□□□ -0.25
LINC01550-206ENST00000556462 LY75O60449 1722 aa13.46□□□□□ -0.25
LINC01550-206ENST00000556462 AFDNP55196 1824 aaKnown RBP13.46□□□□□ -0.26
LINC01550-206ENST00000556462 RPS6KA4O75676 772 aa13.46□□□□□ -0.26
LINC01550-206ENST00000556462 NLRP10Q86W26 655 aa13.46□□□□□ -0.26
LINC01550-206ENST00000556462 ZNF34Q8IZ26 560 aa13.46□□□□□ -0.26
LINC01550-206ENST00000556462 APBB1O00213 710 aa13.45□□□□□ -0.26
LINC01550-206ENST00000556462 SMARCA5O60264 1052 aaPredicted RBP13.45□□□□□ -0.26
LINC01550-206ENST00000556462 GPTP24298 496 aa13.45□□□□□ -0.26
LINC01550-206ENST00000556462 FOXO4P98177 505 aa13.45□□□□□ -0.26
LINC01550-206ENST00000556462 RTL5Q5HYW3 569 aaPredicted RBP13.45□□□□□ -0.26
LINC01550-206ENST00000556462 C16orf71Q8IYS4 520 aaPredicted RBP13.45□□□□□ -0.26
LINC01550-206ENST00000556462 NOP58Q9Y2X3 529 aaKnown RBP13.45□□□□□ -0.26
LINC01550-206ENST00000556462 SURF6O75683 361 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms