RNA–Protein interactions for RNA: ENST00000556348.1

CCDC85C-205, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 5

Gene CCDC85C, Length 556 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-205ENST00000556348 PCNTO95613 3336 aa15.33■□□□□ 0.04
CCDC85C-205ENST00000556348 CAMTA2O94983 1202 aa15.33■□□□□ 0.04
CCDC85C-205ENST00000556348 NBPF5PQ86XG9 351 aaPredicted RBP15.33■□□□□ 0.04
CCDC85C-205ENST00000556348 COL11A2P13942 1736 aaPredicted RBP15.33■□□□□ 0.04
CCDC85C-205ENST00000556348 KIF7Q2M1P5 1343 aa15.33■□□□□ 0.04
CCDC85C-205ENST00000556348 SCN7AQ01118 1682 aa15.32■□□□□ 0.04
CCDC85C-205ENST00000556348 SLX4Q8IY92 1834 aa15.32■□□□□ 0.04
CCDC85C-205ENST00000556348 BTBD11A6QL63 1104 aa15.32■□□□□ 0.04
CCDC85C-205ENST00000556348 LDHDQ86WU2 507 aa15.32■□□□□ 0.04
CCDC85C-205ENST00000556348 CACNA1SQ13698 1873 aa15.31■□□□□ 0.04
CCDC85C-205ENST00000556348 CCDC93Q567U6 631 aa15.31■□□□□ 0.04
CCDC85C-205ENST00000556348 EAPPQ56P03 285 aaPredicted RBP15.31■□□□□ 0.04
CCDC85C-205ENST00000556348 AIDAQ96BJ3 306 aa15.31■□□□□ 0.04
CCDC85C-205ENST00000556348 CLEC11AQ9Y240 323 aa15.31■□□□□ 0.04
CCDC85C-205ENST00000556348 ZNF652Q9Y2D9 606 aa15.31■□□□□ 0.04
CCDC85C-205ENST00000556348 PER1O15534 1290 aaPredicted RBP15.3■□□□□ 0.04
CCDC85C-205ENST00000556348 KCNQ3O43525 872 aa15.3■□□□□ 0.04
CCDC85C-205ENST00000556348 PIP4K2AP48426 406 aaPredicted RBP15.3■□□□□ 0.04
CCDC85C-205ENST00000556348 CCER1Q8TC90 406 aaPredicted RBP15.3■□□□□ 0.04
CCDC85C-205ENST00000556348 TAF1DQ9H5J8 278 aaPredicted RBP15.3■□□□□ 0.04
CCDC85C-205ENST00000556348 USP16Q9Y5T5 823 aa15.3■□□□□ 0.04
CCDC85C-205ENST00000556348 CNTNAP1P78357 1384 aa15.29■□□□□ 0.04
CCDC85C-205ENST00000556348 TMEM88BA6NKF7 163 aa15.29■□□□□ 0.04
CCDC85C-205ENST00000556348 FOXN1O15353 648 aa15.29■□□□□ 0.04
CCDC85C-205ENST00000556348 NPR1P16066 1061 aa15.29■□□□□ 0.04
CCDC85C-205ENST00000556348 CLEC4GQ6UXB4 293 aa15.29■□□□□ 0.04
CCDC85C-205ENST00000556348 L3MBTL3Q96JM7 780 aaPredicted RBP15.29■□□□□ 0.04
CCDC85C-205ENST00000556348 PASKQ96RG2 1323 aa15.28■□□□□ 0.04
CCDC85C-205ENST00000556348 TPTE2Q6XPS3 522 aa15.28■□□□□ 0.04
CCDC85C-205ENST00000556348 ZNF277Q9NRM2 450 aaPredicted RBP15.28■□□□□ 0.04
CCDC85C-205ENST00000556348 HACL1Q9UJ83 578 aa15.28■□□□□ 0.04
CCDC85C-205ENST00000556348 SIPA1L3O60292 1781 aaPredicted RBP15.27■□□□□ 0.04
CCDC85C-205ENST00000556348 FAM177BA6PVY3 158 aa15.27■□□□□ 0.04
CCDC85C-205ENST00000556348 PRKAR2BP31323 418 aa15.27■□□□□ 0.04
CCDC85C-205ENST00000556348 CTCFP49711 727 aaPredicted RBP15.27■□□□□ 0.04
CCDC85C-205ENST00000556348 VEGFBP49765 207 aa15.27■□□□□ 0.04
CCDC85C-205ENST00000556348 FKBP4Q02790 459 aaKnown RBP eCLIP15.27■□□□□ 0.04
CCDC85C-205ENST00000556348 RTKN2Q8IZC4 609 aa15.27■□□□□ 0.04
CCDC85C-205ENST00000556348 C7orf43Q8WVR3 580 aa15.27■□□□□ 0.04
CCDC85C-205ENST00000556348 RTF1Q92541 710 aaKnown RBP15.27■□□□□ 0.04
CCDC85C-205ENST00000556348 PHACTR3Q96KR7 559 aa15.27■□□□□ 0.04
CCDC85C-205ENST00000556348 PRDM10Q9NQV6 1147 aa15.27■□□□□ 0.04
CCDC85C-205ENST00000556348 NIP7Q9Y221 180 aaKnown RBP eCLIP15.27■□□□□ 0.04
CCDC85C-205ENST00000556348 SCN4AP35499 1836 aa15.27■□□□□ 0.03
CCDC85C-205ENST00000556348 CEMIPQ8WUJ3 1361 aa15.26■□□□□ 0.03
CCDC85C-205ENST00000556348 SNRPA1P09661 255 aaKnown RBP15.26■□□□□ 0.03
CCDC85C-205ENST00000556348 GTF2E1P29083 439 aaPredicted RBP15.26■□□□□ 0.03
CCDC85C-205ENST00000556348 EPHX2P34913 555 aa15.26■□□□□ 0.03
CCDC85C-205ENST00000556348 ZNF541Q9H0D2 1346 aa15.25■□□□□ 0.03
CCDC85C-205ENST00000556348 PRAMEF22A3QJZ6 481 aa15.25■□□□□ 0.03
CCDC85C-205ENST00000556348 ITGBL1O95965 494 aaPredicted RBP15.25■□□□□ 0.03
CCDC85C-205ENST00000556348 OLFM4Q6UX06 510 aa15.25■□□□□ 0.03
CCDC85C-205ENST00000556348 PNMA8AQ86V59 439 aaPredicted RBP15.25■□□□□ 0.03
CCDC85C-205ENST00000556348 CFAP53Q96M91 514 aa15.25■□□□□ 0.03
CCDC85C-205ENST00000556348 ARFGEF2Q9Y6D5 1785 aa15.25■□□□□ 0.03
CCDC85C-205ENST00000556348 COL3A1P02461 1466 aaPredicted RBP15.25■□□□□ 0.03
CCDC85C-205ENST00000556348 BCORQ6W2J9 1755 aa15.24■□□□□ 0.03
CCDC85C-205ENST00000556348 ALDH1B1P30837 517 aa15.24■□□□□ 0.03
CCDC85C-205ENST00000556348 RNF123Q5XPI4 1314 aa15.23■□□□□ 0.03
CCDC85C-205ENST00000556348 KLRG2A4D1S0 409 aaPredicted RBP15.23■□□□□ 0.03
CCDC85C-205ENST00000556348 IARSP41252 1262 aaKnown RBP15.23■□□□□ 0.03
CCDC85C-205ENST00000556348 LBX1P52954 281 aa15.23■□□□□ 0.03
CCDC85C-205ENST00000556348 DEFB115Q30KQ5 88 aa15.23■□□□□ 0.03
CCDC85C-205ENST00000556348 MAP1SQ66K74 1059 aaPredicted RBP15.23■□□□□ 0.03
CCDC85C-205ENST00000556348 MCM10Q7L590 875 aa15.23■□□□□ 0.03
CCDC85C-205ENST00000556348 CNTROBQ8N137 903 aa15.23■□□□□ 0.03
CCDC85C-205ENST00000556348 SYNE4Q8N205 404 aa15.23■□□□□ 0.03
CCDC85C-205ENST00000556348 JDP2Q8WYK2 163 aa15.23■□□□□ 0.03
CCDC85C-205ENST00000556348 NUDCQ9Y266 331 aa15.23■□□□□ 0.03
CCDC85C-205ENST00000556348 RSPH6AQ9H0K4 717 aa15.22■□□□□ 0.03
CCDC85C-205ENST00000556348 WBP1LQ9NX94 342 aa15.22■□□□□ 0.03
CCDC85C-205ENST00000556348 ABT1Q9ULW3 272 aaKnown RBP15.22■□□□□ 0.03
CCDC85C-205ENST00000556348 NPC1L1Q9UHC9 1359 aa15.22■□□□□ 0.03
CCDC85C-205ENST00000556348 NBPF26B4DH59 902 aa15.21■□□□□ 0.03
CCDC85C-205ENST00000556348 FZD9O00144 591 aa15.21■□□□□ 0.03
CCDC85C-205ENST00000556348 U2AF1L5P0DN76 240 aaPredicted RBP15.21■□□□□ 0.03
CCDC85C-205ENST00000556348 U2AF1Q01081 240 aaKnown RBP eCLIP15.21■□□□□ 0.03
CCDC85C-205ENST00000556348 NBPF10Q6P3W6 841 aaKnown RBP15.21■□□□□ 0.03
CCDC85C-205ENST00000556348 GPC2Q8N158 579 aa15.21■□□□□ 0.03
CCDC85C-205ENST00000556348 NBPF15Q8N660 670 aa15.21■□□□□ 0.03
CCDC85C-205ENST00000556348 RGL2O15211 777 aa15.2■□□□□ 0.02
CCDC85C-205ENST00000556348 EIF6P56537 245 aaKnown RBP15.2■□□□□ 0.02
CCDC85C-205ENST00000556348 NGEFQ8N5V2 710 aa15.2■□□□□ 0.02
CCDC85C-205ENST00000556348 GJA3Q9Y6H8 435 aa15.2■□□□□ 0.02
CCDC85C-205ENST00000556348 RASSF10A6NK89 507 aa15.19■□□□□ 0.02
CCDC85C-205ENST00000556348 LMOD1P29536 600 aaPredicted RBP15.19■□□□□ 0.02
CCDC85C-205ENST00000556348 MAP2K1Q02750 393 aaPredicted RBP15.19■□□□□ 0.02
CCDC85C-205ENST00000556348 DCTN1Q14203 1278 aa15.19■□□□□ 0.02
CCDC85C-205ENST00000556348 HLFQ16534 295 aa15.19■□□□□ 0.02
CCDC85C-205ENST00000556348 NYXQ9GZU5 481 aa15.19■□□□□ 0.02
CCDC85C-205ENST00000556348 WDR33Q9C0J8 1336 aaKnown RBP15.18■□□□□ 0.02
CCDC85C-205ENST00000556348 PAXIP1Q6ZW49 1069 aaPredicted RBP15.18■□□□□ 0.02
CCDC85C-205ENST00000556348 RPGRQ92834 1020 aaKnown RBP15.18■□□□□ 0.02
CCDC85C-205ENST00000556348 PSMD1Q99460 953 aa15.18■□□□□ 0.02
CCDC85C-205ENST00000556348 TAF7Q15545 349 aaPredicted RBP15.17■□□□□ 0.02
CCDC85C-205ENST00000556348 CC2D2BQ6DHV5 1058 aa15.17■□□□□ 0.02
CCDC85C-205ENST00000556348 NUTM1Q86Y26 1132 aa15.17■□□□□ 0.02
CCDC85C-205ENST00000556348 HTATSF1O43719 755 aaKnown RBP15.16■□□□□ 0.02
CCDC85C-205ENST00000556348 HSPA8P11142 646 aaKnown RBP15.16■□□□□ 0.02
CCDC85C-205ENST00000556348 GRM1Q13255 1194 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms