RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 DZIP3Q86Y13 1208 aaKnown RBP11.61□□□□□ -0.55
ACTN1-218ENST00000556343 LINS1Q8NG48 757 aa11.61□□□□□ -0.55
ACTN1-218ENST00000556343 METTL22Q9BUU2 404 aaPredicted RBP11.61□□□□□ -0.55
ACTN1-218ENST00000556343 PPP4R2Q9NY27 417 aa11.61□□□□□ -0.55
ACTN1-218ENST00000556343 ZPR1O75312 459 aa11.6□□□□□ -0.55
ACTN1-218ENST00000556343 GNAI3P08754 354 aa11.6□□□□□ -0.55
ACTN1-218ENST00000556343 RLBP1P12271 317 aa11.6□□□□□ -0.55
ACTN1-218ENST00000556343 FLAD1Q8NFF5 587 aa11.6□□□□□ -0.55
ACTN1-218ENST00000556343 MYD88Q99836 296 aa11.6□□□□□ -0.55
ACTN1-218ENST00000556343 MAP3K15Q6ZN16 1313 aa11.6□□□□□ -0.55
ACTN1-218ENST00000556343 GNPATO15228 680 aa11.59□□□□□ -0.55
ACTN1-218ENST00000556343 RFC4P35249 363 aa11.59□□□□□ -0.55
ACTN1-218ENST00000556343 TCIRG1Q13488 830 aa11.59□□□□□ -0.55
ACTN1-218ENST00000556343 BEND3Q5T5X7 828 aa11.59□□□□□ -0.55
ACTN1-218ENST00000556343 CLEC4GQ6UXB4 293 aa11.59□□□□□ -0.55
ACTN1-218ENST00000556343 TTLL7Q6ZT98 887 aa11.59□□□□□ -0.55
ACTN1-218ENST00000556343 C9orf78Q9NZ63 289 aaPredicted RBP11.59□□□□□ -0.55
ACTN1-218ENST00000556343 TNNQ9UQP3 1299 aa11.59□□□□□ -0.55
ACTN1-218ENST00000556343 BTAF1O14981 1849 aa11.58□□□□□ -0.56
ACTN1-218ENST00000556343 SBF2Q86WG5 1849 aa11.58□□□□□ -0.56
ACTN1-218ENST00000556343 PXDNLA1KZ92 1463 aa11.58□□□□□ -0.56
ACTN1-218ENST00000556343 ADCY9O60503 1353 aa11.58□□□□□ -0.56
ACTN1-218ENST00000556343 ZBTB7BO15156 539 aaPredicted RBP11.58□□□□□ -0.56
ACTN1-218ENST00000556343 KCNQ4P56696 695 aa11.58□□□□□ -0.56
ACTN1-218ENST00000556343 GIGYF2Q6Y7W6 1299 aaKnown RBP11.58□□□□□ -0.56
ACTN1-218ENST00000556343 ZBTB3Q9H5J0 574 aa11.58□□□□□ -0.56
ACTN1-218ENST00000556343 LRRC4BQ9NT99 713 aa11.58□□□□□ -0.56
ACTN1-218ENST00000556343 TBC1D2BQ9UPU7 963 aa11.58□□□□□ -0.56
ACTN1-218ENST00000556343 LAMB4A4D0S4 1761 aa11.58□□□□□ -0.56
ACTN1-218ENST00000556343 ATP10DQ9P241 1426 aa11.58□□□□□ -0.56
ACTN1-218ENST00000556343 ZNF831Q5JPB2 1677 aa11.57□□□□□ -0.56
ACTN1-218ENST00000556343 UBTFL1P0CB47 393 aaPredicted RBP11.57□□□□□ -0.56
ACTN1-218ENST00000556343 HSP90B1P14625 803 aaKnown RBP11.57□□□□□ -0.56
ACTN1-218ENST00000556343 SSFA2P28290 1259 aa11.57□□□□□ -0.56
ACTN1-218ENST00000556343 EN1Q05925 392 aaPredicted RBP11.57□□□□□ -0.56
ACTN1-218ENST00000556343 TRIM28Q13263 835 aaKnown RBP11.57□□□□□ -0.56
ACTN1-218ENST00000556343 PROM2Q8N271 834 aa11.57□□□□□ -0.56
ACTN1-218ENST00000556343 CCDC191Q8NCU4 936 aa11.57□□□□□ -0.56
ACTN1-218ENST00000556343 CCDC136Q96JN2 1154 aa11.57□□□□□ -0.56
ACTN1-218ENST00000556343 CAMKK2Q96RR4 588 aa11.57□□□□□ -0.56
ACTN1-218ENST00000556343 CWC25Q9NXE8 425 aaPredicted RBP11.57□□□□□ -0.56
ACTN1-218ENST00000556343 STK32BQ9NY57 414 aa11.57□□□□□ -0.56
ACTN1-218ENST00000556343 TFCP2L1Q9NZI6 479 aa11.57□□□□□ -0.56
ACTN1-218ENST00000556343 NARFQ9UHQ1 456 aa11.57□□□□□ -0.56
ACTN1-218ENST00000556343 COL15A1P39059 1388 aa11.56□□□□□ -0.56
ACTN1-218ENST00000556343 IBTKQ9P2D0 1353 aaPredicted RBP11.56□□□□□ -0.56
ACTN1-218ENST00000556343 C5P01031 1676 aa11.56□□□□□ -0.56
ACTN1-218ENST00000556343 NEURL1BA8MQ27 555 aa11.56□□□□□ -0.56
ACTN1-218ENST00000556343 GNAI2P04899 355 aa11.56□□□□□ -0.56
ACTN1-218ENST00000556343 RWDD1Q9H446 243 aaPredicted RBP11.56□□□□□ -0.56
ACTN1-218ENST00000556343 ZBTB40Q9NUA8 1239 aa11.56□□□□□ -0.56
ACTN1-218ENST00000556343 GCKRQ14397 625 aa11.55□□□□□ -0.56
ACTN1-218ENST00000556343 EZH2Q15910 746 aaKnown RBP11.55□□□□□ -0.56
ACTN1-218ENST00000556343 PARP10Q53GL7 1025 aa11.55□□□□□ -0.56
ACTN1-218ENST00000556343 RPAP2Q8IXW5 612 aaPredicted RBP11.55□□□□□ -0.56
ACTN1-218ENST00000556343 ISCA1Q9BUE6 129 aa11.55□□□□□ -0.56
ACTN1-218ENST00000556343 CICQ96RK0 1608 aaPredicted RBP11.54□□□□□ -0.56
ACTN1-218ENST00000556343 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.54□□□□□ -0.56
ACTN1-218ENST00000556343 ATP5J2-PTCD1G3V325 749 aa11.54□□□□□ -0.56
ACTN1-218ENST00000556343 GRM8O00222 908 aa11.54□□□□□ -0.56
ACTN1-218ENST00000556343 HMMRO75330 724 aa11.54□□□□□ -0.56
ACTN1-218ENST00000556343 PHF14O94880 888 aa11.54□□□□□ -0.56
ACTN1-218ENST00000556343 CAMTA2O94983 1202 aa11.54□□□□□ -0.56
ACTN1-218ENST00000556343 CWF19L2Q2TBE0 894 aaKnown RBP11.54□□□□□ -0.56
ACTN1-218ENST00000556343 PPP1R42Q7Z4L9 355 aa11.54□□□□□ -0.56
ACTN1-218ENST00000556343 ARHGEF1Q92888 912 aaKnown RBP11.54□□□□□ -0.56
ACTN1-218ENST00000556343 USP44Q9H0E7 712 aa11.54□□□□□ -0.56
ACTN1-218ENST00000556343 TJP1Q07157 1748 aa11.54□□□□□ -0.56
ACTN1-218ENST00000556343 MSH5O43196 834 aa11.53□□□□□ -0.56
ACTN1-218ENST00000556343 IGKV5-2P06315 115 aa11.53□□□□□ -0.56
ACTN1-218ENST00000556343 HLFQ16534 295 aa11.53□□□□□ -0.56
ACTN1-218ENST00000556343 AKT1S1Q96B36 256 aa11.53□□□□□ -0.56
ACTN1-218ENST00000556343 SETDB2Q96T68 719 aa11.53□□□□□ -0.56
ACTN1-218ENST00000556343 MEIS3Q99687 375 aa11.53□□□□□ -0.56
ACTN1-218ENST00000556343 LY75O60449 1722 aa11.52□□□□□ -0.56
ACTN1-218ENST00000556343 USPL1Q5W0Q7 1092 aa11.52□□□□□ -0.57
ACTN1-218ENST00000556343 ZNF34Q8IZ26 560 aa11.52□□□□□ -0.57
ACTN1-218ENST00000556343 UTP14AQ9BVJ6 771 aaKnown RBP11.52□□□□□ -0.57
ACTN1-218ENST00000556343 NYXQ9GZU5 481 aa11.52□□□□□ -0.57
ACTN1-218ENST00000556343 NIP7Q9Y221 180 aaKnown RBP eCLIP11.52□□□□□ -0.57
ACTN1-218ENST00000556343 UTYO14607 1347 aa11.52□□□□□ -0.57
ACTN1-218ENST00000556343 H7C1W4 665 aa11.51□□□□□ -0.57
ACTN1-218ENST00000556343 NPHP1O15259 732 aa11.51□□□□□ -0.57
ACTN1-218ENST00000556343 PCCAP05165 728 aaPredicted RBP11.51□□□□□ -0.57
ACTN1-218ENST00000556343 GPTP24298 496 aa11.51□□□□□ -0.57
ACTN1-218ENST00000556343 GTF2E1P29083 439 aaPredicted RBP11.51□□□□□ -0.57
ACTN1-218ENST00000556343 SLC15A2Q16348 729 aa11.51□□□□□ -0.57
ACTN1-218ENST00000556343 DEFB132Q7Z7B7 95 aa11.51□□□□□ -0.57
ACTN1-218ENST00000556343 NLRP10Q86W26 655 aa11.51□□□□□ -0.57
ACTN1-218ENST00000556343 NLGN1Q8N2Q7 840 aa11.51□□□□□ -0.57
ACTN1-218ENST00000556343 ZBTB38Q8NAP3 1195 aaPredicted RBP11.51□□□□□ -0.57
ACTN1-218ENST00000556343 TRMT112Q9UI30 125 aaKnown RBP11.51□□□□□ -0.57
ACTN1-218ENST00000556343 USP42Q9H9J4 1324 aaKnown RBP11.51□□□□□ -0.57
ACTN1-218ENST00000556343 NBPF7P0C2Y1 421 aaPredicted RBP11.5□□□□□ -0.57
ACTN1-218ENST00000556343 ATP8B2P98198 1209 aa11.5□□□□□ -0.57
ACTN1-218ENST00000556343 ANKRD44Q8N8A2 993 aa11.5□□□□□ -0.57
ACTN1-218ENST00000556343 ZBTB47Q9UFB7 747 aaPredicted RBP11.5□□□□□ -0.57
ACTN1-218ENST00000556343 LRRFIP2Q9Y608 721 aaKnown RBP11.5□□□□□ -0.57
ACTN1-218ENST00000556343 EP400Q96L91 3159 aa11.5□□□□□ -0.57
ACTN1-218ENST00000556343 C4BP0C0L5 1744 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms