RNA–Protein interactions for RNA: ENST00000555627.1

SIX1-204, Transcript of SIX homeobox 1, humanhuman

TSL 5

Gene SIX1, Length 461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-204ENST00000555627 SGIP1Q9BQI5 828 aa12.2□□□□□ -0.46
SIX1-204ENST00000555627 STK31Q9BXU1 1019 aa12.2□□□□□ -0.46
SIX1-204ENST00000555627 PHAXQ9H814 394 aaKnown RBP12.2□□□□□ -0.46
SIX1-204ENST00000555627 ATG3Q9NT62 314 aa12.2□□□□□ -0.46
SIX1-204ENST00000555627 COL24A1Q17RW2 1714 aa12.2□□□□□ -0.46
SIX1-204ENST00000555627 ITPRIPQ8IWB1 547 aa12.19□□□□□ -0.46
SIX1-204ENST00000555627 PELP1Q8IZL8 1130 aaKnown RBP12.19□□□□□ -0.46
SIX1-204ENST00000555627 TTC5Q8N0Z6 440 aa12.19□□□□□ -0.46
SIX1-204ENST00000555627 SLC4A9Q96Q91 983 aa12.19□□□□□ -0.46
SIX1-204ENST00000555627 ASAP1Q9ULH1 1129 aa12.19□□□□□ -0.46
SIX1-204ENST00000555627 ERBB4Q15303 1308 aa12.18□□□□□ -0.46
SIX1-204ENST00000555627 F6X3S4 739 aa12.18□□□□□ -0.46
SIX1-204ENST00000555627 SNRPA1P09661 255 aaKnown RBP12.18□□□□□ -0.46
SIX1-204ENST00000555627 EIF2S2P20042 333 aaKnown RBP12.18□□□□□ -0.46
SIX1-204ENST00000555627 CCDC136Q96JN2 1154 aa12.18□□□□□ -0.46
SIX1-204ENST00000555627 ZBTB40Q9NUA8 1239 aa12.18□□□□□ -0.46
SIX1-204ENST00000555627 DDX19BQ9UMR2 479 aa12.18□□□□□ -0.46
SIX1-204ENST00000555627 PCDHB15Q9Y5E8 787 aa12.18□□□□□ -0.46
SIX1-204ENST00000555627 USP16Q9Y5T5 823 aa12.18□□□□□ -0.46
SIX1-204ENST00000555627 ARXQ96QS3 562 aa12.17□□□□□ -0.46
SIX1-204ENST00000555627 DDX21Q9NR30 783 aaKnown RBP eCLIP12.17□□□□□ -0.46
SIX1-204ENST00000555627 DBF4Q9UBU7 674 aaPredicted RBP12.17□□□□□ -0.46
SIX1-204ENST00000555627 DDX60Q8IY21 1712 aaKnown RBP12.17□□□□□ -0.46
SIX1-204ENST00000555627 IBTKQ9P2D0 1353 aaPredicted RBP12.17□□□□□ -0.46
SIX1-204ENST00000555627 NBPF26B4DH59 902 aa12.16□□□□□ -0.46
SIX1-204ENST00000555627 FKBP5Q13451 457 aaPredicted RBP12.16□□□□□ -0.46
SIX1-204ENST00000555627 AAMPQ13685 434 aa12.16□□□□□ -0.46
SIX1-204ENST00000555627 NBPF10Q6P3W6 841 aaKnown RBP12.16□□□□□ -0.46
SIX1-204ENST00000555627 NBPF15Q8N660 670 aa12.16□□□□□ -0.46
SIX1-204ENST00000555627 JMYQ8N9B5 988 aa12.16□□□□□ -0.46
SIX1-204ENST00000555627 ZNF526Q8TF50 670 aaPredicted RBP12.16□□□□□ -0.46
SIX1-204ENST00000555627 PALLDQ8WX93 1383 aa12.16□□□□□ -0.46
SIX1-204ENST00000555627 ZBTB7BO15156 539 aaPredicted RBP12.15□□□□□ -0.46
SIX1-204ENST00000555627 PRIM1P49642 420 aaKnown RBP12.15□□□□□ -0.46
SIX1-204ENST00000555627 ACSBG1Q96GR2 724 aa12.15□□□□□ -0.46
SIX1-204ENST00000555627 MTFR1LQ9H019 292 aa12.15□□□□□ -0.46
SIX1-204ENST00000555627 A0A1B0GUL6 1792 aa12.15□□□□□ -0.46
SIX1-204ENST00000555627 PTCD1O75127 700 aaKnown RBP12.14□□□□□ -0.47
SIX1-204ENST00000555627 PIP4K2AP48426 406 aaPredicted RBP12.14□□□□□ -0.47
SIX1-204ENST00000555627 PTF1AQ7RTS3 328 aa12.14□□□□□ -0.47
SIX1-204ENST00000555627 DNAJC10Q8IXB1 793 aa12.14□□□□□ -0.47
SIX1-204ENST00000555627 VSIG10Q8N0Z9 540 aa12.14□□□□□ -0.47
SIX1-204ENST00000555627 MEIS3Q99687 375 aa12.14□□□□□ -0.47
SIX1-204ENST00000555627 IGHDP01880 384 aa12.13□□□□□ -0.47
SIX1-204ENST00000555627 C1orf115Q9H7X2 142 aa12.13□□□□□ -0.47
SIX1-204ENST00000555627 HYPKQ9NX55 129 aa12.13□□□□□ -0.47
SIX1-204ENST00000555627 QSER1Q2KHR3 1735 aa12.12□□□□□ -0.47
SIX1-204ENST00000555627 SPEF2Q9C093 1822 aa12.12□□□□□ -0.47
SIX1-204ENST00000555627 CCT4P50991 539 aaKnown RBP12.12□□□□□ -0.47
SIX1-204ENST00000555627 BEND3Q5T5X7 828 aa12.12□□□□□ -0.47
SIX1-204ENST00000555627 CENPQQ7L2Z9 268 aaPredicted RBP12.12□□□□□ -0.47
SIX1-204ENST00000555627 XAGE3Q8WTP9 111 aa12.12□□□□□ -0.47
SIX1-204ENST00000555627 DNAAF4Q8WXU2 420 aa12.12□□□□□ -0.47
SIX1-204ENST00000555627 KLRG1Q96E93 195 aa12.12□□□□□ -0.47
SIX1-204ENST00000555627 CHMP4AQ9BY43 222 aa12.12□□□□□ -0.47
SIX1-204ENST00000555627 BCL11BQ9C0K0 894 aaPredicted RBP12.12□□□□□ -0.47
SIX1-204ENST00000555627 PI4KAP2A4QPH2 592 aa12.11□□□□□ -0.47
SIX1-204ENST00000555627 MYL6BP14649 208 aa12.11□□□□□ -0.47
SIX1-204ENST00000555627 SKAP1Q86WV1 359 aa12.11□□□□□ -0.47
SIX1-204ENST00000555627 SIRT2Q8IXJ6 389 aa12.11□□□□□ -0.47
SIX1-204ENST00000555627 PI4KAP1Q8N8J0 262 aa12.11□□□□□ -0.47
SIX1-204ENST00000555627 SYTL4Q96C24 671 aaPredicted RBP12.11□□□□□ -0.47
SIX1-204ENST00000555627 A1BGP04217 495 aa12.1□□□□□ -0.47
SIX1-204ENST00000555627 CYP19A1P11511 503 aaPredicted RBP12.1□□□□□ -0.47
SIX1-204ENST00000555627 HDAC1Q13547 482 aaPredicted RBP12.1□□□□□ -0.47
SIX1-204ENST00000555627 ITPK1Q13572 414 aa12.1□□□□□ -0.47
SIX1-204ENST00000555627 SLC4A10Q6U841 1118 aa12.1□□□□□ -0.47
SIX1-204ENST00000555627 KSR2Q6VAB6 950 aa12.1□□□□□ -0.47
SIX1-204ENST00000555627 WDR90Q96KV7 1748 aa12.1□□□□□ -0.47
SIX1-204ENST00000555627 AK9Q5TCS8 1911 aa12.09□□□□□ -0.47
SIX1-204ENST00000555627 KIF3CO14782 793 aa12.09□□□□□ -0.47
SIX1-204ENST00000555627 FAM161AQ3B820 660 aa12.09□□□□□ -0.47
SIX1-204ENST00000555627 ZBTB1Q9Y2K1 713 aa12.09□□□□□ -0.47
SIX1-204ENST00000555627 MAP3K2Q9Y2U5 619 aa12.09□□□□□ -0.47
SIX1-204ENST00000555627 LOC102724428A0A0B4J2F2 783 aa12.08□□□□□ -0.48
SIX1-204ENST00000555627 GRIN3BO60391 1043 aa12.08□□□□□ -0.48
SIX1-204ENST00000555627 IGKV5-2P06315 115 aa12.08□□□□□ -0.48
SIX1-204ENST00000555627 YBX3P16989 372 aaKnown RBP eCLIP12.08□□□□□ -0.48
SIX1-204ENST00000555627 SIK1P57059 783 aa12.08□□□□□ -0.48
SIX1-204ENST00000555627 CEP85Q6P2H3 762 aa12.08□□□□□ -0.48
SIX1-204ENST00000555627 TTLL7Q6ZT98 887 aa12.08□□□□□ -0.48
SIX1-204ENST00000555627 COPS6Q7L5N1 327 aa12.08□□□□□ -0.48
SIX1-204ENST00000555627 KLHL34Q8N239 644 aa12.08□□□□□ -0.48
SIX1-204ENST00000555627 RBM42Q9BTD8 480 aaKnown RBP12.08□□□□□ -0.48
SIX1-204ENST00000555627 UTYO14607 1347 aa12.08□□□□□ -0.48
SIX1-204ENST00000555627 PLSCR1O15162 318 aa12.07□□□□□ -0.48
SIX1-204ENST00000555627 AIMP1Q12904 312 aaKnown RBP12.07□□□□□ -0.48
SIX1-204ENST00000555627 SMC5Q8IY18 1101 aa12.07□□□□□ -0.48
SIX1-204ENST00000555627 ANKRD44Q8N8A2 993 aa12.07□□□□□ -0.48
SIX1-204ENST00000555627 SRCIN1Q9C0H9 1055 aa12.07□□□□□ -0.48
SIX1-204ENST00000555627 USP44Q9H0E7 712 aa12.07□□□□□ -0.48
SIX1-204ENST00000555627 TNRC6CQ9HCJ0 1690 aaKnown RBP12.06□□□□□ -0.48
SIX1-204ENST00000555627 COL15A1P39059 1388 aa12.06□□□□□ -0.48
SIX1-204ENST00000555627 NEURL1BA8MQ27 555 aa12.06□□□□□ -0.48
SIX1-204ENST00000555627 ALDH1L1O75891 902 aa12.06□□□□□ -0.48
SIX1-204ENST00000555627 HTRA3P83110 453 aa12.06□□□□□ -0.48
SIX1-204ENST00000555627 CWF19L2Q2TBE0 894 aaKnown RBP12.06□□□□□ -0.48
SIX1-204ENST00000555627 LINC00116Q8NCU8 138 aa12.06□□□□□ -0.48
SIX1-204ENST00000555627 SMARCC1Q92922 1105 aaPredicted RBP12.06□□□□□ -0.48
SIX1-204ENST00000555627 METTL22Q9BUU2 404 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms