RNA–Protein interactions for RNA: ENST00000555322.5

RPGRIP1-207, Transcript of RPGR interacting protein 1, humanhuman

TSL 1 (best)

Gene RPGRIP1, Length 2,373 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-207ENST00000555322 SPATA31A6Q5VVP1 1343 aa11.31□□□□□ -0.6
RPGRIP1-207ENST00000555322 SRGAP3O43295 1099 aa11.31□□□□□ -0.6
RPGRIP1-207ENST00000555322 RBM25P49756 843 aaKnown RBP11.31□□□□□ -0.6
RPGRIP1-207ENST00000555322 GCKRQ14397 625 aa11.31□□□□□ -0.6
RPGRIP1-207ENST00000555322 BECN1Q14457 450 aa11.31□□□□□ -0.6
RPGRIP1-207ENST00000555322 USP42Q9H9J4 1324 aaKnown RBP11.31□□□□□ -0.6
RPGRIP1-207ENST00000555322 SEC24BO95487 1268 aa11.31□□□□□ -0.6
RPGRIP1-207ENST00000555322 IGKV5-2P06315 115 aa11.31□□□□□ -0.6
RPGRIP1-207ENST00000555322 PDIA4P13667 645 aaKnown RBP11.31□□□□□ -0.6
RPGRIP1-207ENST00000555322 GSPT1P15170 499 aaKnown RBP11.31□□□□□ -0.6
RPGRIP1-207ENST00000555322 RREB1Q92766 1687 aa11.3□□□□□ -0.6
RPGRIP1-207ENST00000555322 MYL6BP14649 208 aa11.3□□□□□ -0.6
RPGRIP1-207ENST00000555322 PDE1AP54750 535 aa11.3□□□□□ -0.6
RPGRIP1-207ENST00000555322 TPRNQ4KMQ1 711 aa11.3□□□□□ -0.6
RPGRIP1-207ENST00000555322 TJP1Q07157 1748 aa11.3□□□□□ -0.6
RPGRIP1-207ENST00000555322 STARD3NLO95772 234 aa11.3□□□□□ -0.6
RPGRIP1-207ENST00000555322 MX1P20591 662 aa11.3□□□□□ -0.6
RPGRIP1-207ENST00000555322 C22orf23Q9BZE7 217 aa11.3□□□□□ -0.6
RPGRIP1-207ENST00000555322 EXOC6BQ9Y2D4 811 aa11.3□□□□□ -0.6
RPGRIP1-207ENST00000555322 UBAP1LF5GYI3 381 aa11.29□□□□□ -0.6
RPGRIP1-207ENST00000555322 AIMP1Q12904 312 aaKnown RBP11.29□□□□□ -0.6
RPGRIP1-207ENST00000555322 CWF19L2Q2TBE0 894 aaKnown RBP11.29□□□□□ -0.6
RPGRIP1-207ENST00000555322 TBC1D9Q6ZT07 1266 aa11.29□□□□□ -0.6
RPGRIP1-207ENST00000555322 PIGBQ92521 554 aa11.29□□□□□ -0.6
RPGRIP1-207ENST00000555322 NBPF26B4DH59 902 aa11.28□□□□□ -0.6
RPGRIP1-207ENST00000555322 NBPF14Q5TI25 921 aa11.28□□□□□ -0.6
RPGRIP1-207ENST00000555322 NBPF10Q6P3W6 841 aaKnown RBP11.28□□□□□ -0.6
RPGRIP1-207ENST00000555322 NBPF15Q8N660 670 aa11.28□□□□□ -0.6
RPGRIP1-207ENST00000555322 MYD88Q99836 296 aa11.28□□□□□ -0.6
RPGRIP1-207ENST00000555322 ATG3Q9NT62 314 aa11.28□□□□□ -0.6
RPGRIP1-207ENST00000555322 USP35Q9P2H5 1018 aa11.28□□□□□ -0.6
RPGRIP1-207ENST00000555322 TTC41PQ6P2S7 1318 aa11.28□□□□□ -0.6
RPGRIP1-207ENST00000555322 EPB41L2O43491 1005 aaKnown RBP11.28□□□□□ -0.6
RPGRIP1-207ENST00000555322 SURF6O75683 361 aaKnown RBP11.28□□□□□ -0.6
RPGRIP1-207ENST00000555322 DDB1Q16531 1140 aa11.28□□□□□ -0.6
RPGRIP1-207ENST00000555322 RABL6Q3YEC7 729 aaPredicted RBP11.28□□□□□ -0.6
RPGRIP1-207ENST00000555322 IL27Q8NEV9 243 aa11.28□□□□□ -0.6
RPGRIP1-207ENST00000555322 RHPN1Q8TCX5 695 aa11.28□□□□□ -0.6
RPGRIP1-207ENST00000555322 SMARCA5O60264 1052 aaPredicted RBP11.27□□□□□ -0.6
RPGRIP1-207ENST00000555322 TRIM28Q13263 835 aaKnown RBP11.27□□□□□ -0.6
RPGRIP1-207ENST00000555322 VPS72Q15906 364 aa11.27□□□□□ -0.6
RPGRIP1-207ENST00000555322 UNC5CLQ8IV45 518 aa11.27□□□□□ -0.6
RPGRIP1-207ENST00000555322 CCDC191Q8NCU4 936 aa11.27□□□□□ -0.6
RPGRIP1-207ENST00000555322 SUCLG2Q96I99 432 aa11.27□□□□□ -0.6
RPGRIP1-207ENST00000555322 ANP32EQ9BTT0 268 aa11.27□□□□□ -0.6
RPGRIP1-207ENST00000555322 MFAP1P55081 439 aaKnown RBP11.27□□□□□ -0.61
RPGRIP1-207ENST00000555322 THSD7AQ9UPZ6 1657 aa11.27□□□□□ -0.61
RPGRIP1-207ENST00000555322 ADAMTS2O95450 1211 aa11.26□□□□□ -0.61
RPGRIP1-207ENST00000555322 SDSP20132 328 aa11.26□□□□□ -0.61
RPGRIP1-207ENST00000555322 PIP4K2BP78356 416 aa11.26□□□□□ -0.61
RPGRIP1-207ENST00000555322 C16orf71Q8IYS4 520 aaPredicted RBP11.26□□□□□ -0.61
RPGRIP1-207ENST00000555322 GPATCH3Q96I76 525 aa11.26□□□□□ -0.61
RPGRIP1-207ENST00000555322 BCL9LQ86UU0 1499 aa11.26□□□□□ -0.61
RPGRIP1-207ENST00000555322 OTUD7AQ8TE49 926 aaPredicted RBP11.26□□□□□ -0.61
RPGRIP1-207ENST00000555322 KAZALD1Q96I82 304 aa11.26□□□□□ -0.61
RPGRIP1-207ENST00000555322 BICC1Q9H694 974 aaKnown RBP11.26□□□□□ -0.61
RPGRIP1-207ENST00000555322 CWC25Q9NXE8 425 aaPredicted RBP11.26□□□□□ -0.61
RPGRIP1-207ENST00000555322 ANKRD36CQ5JPF3 1778 aa11.26□□□□□ -0.61
RPGRIP1-207ENST00000555322 H7C1W4 665 aa11.25□□□□□ -0.61
RPGRIP1-207ENST00000555322 PTCD1O75127 700 aaKnown RBP11.25□□□□□ -0.61
RPGRIP1-207ENST00000555322 REC8O95072 547 aa11.25□□□□□ -0.61
RPGRIP1-207ENST00000555322 CASP7P55210 303 aa11.25□□□□□ -0.61
RPGRIP1-207ENST00000555322 HSP90AB3PQ58FF7 597 aa11.25□□□□□ -0.61
RPGRIP1-207ENST00000555322 KIF6Q6ZMV9 814 aa11.25□□□□□ -0.61
RPGRIP1-207ENST00000555322 FNBP4Q8N3X1 1017 aaPredicted RBP11.25□□□□□ -0.61
RPGRIP1-207ENST00000555322 COPRSQ9NQ92 184 aa11.25□□□□□ -0.61
RPGRIP1-207ENST00000555322 CLASRPQ8N2M8 674 aaKnown RBP11.25□□□□□ -0.61
RPGRIP1-207ENST00000555322 ASAP1Q9ULH1 1129 aa11.25□□□□□ -0.61
RPGRIP1-207ENST00000555322 APBB1O00213 710 aa11.24□□□□□ -0.61
RPGRIP1-207ENST00000555322 ERC2O15083 957 aa11.24□□□□□ -0.61
RPGRIP1-207ENST00000555322 SMARCC1Q92922 1105 aaPredicted RBP11.24□□□□□ -0.61
RPGRIP1-207ENST00000555322 SNX21Q969T3 373 aa11.24□□□□□ -0.61
RPGRIP1-207ENST00000555322 ISCA1Q9BUE6 129 aa11.24□□□□□ -0.61
RPGRIP1-207ENST00000555322 OS9Q13438 667 aaPredicted RBP11.24□□□□□ -0.61
RPGRIP1-207ENST00000555322 A0A087WZG4 1122 aa11.23□□□□□ -0.61
RPGRIP1-207ENST00000555322 GLRX3O76003 335 aaKnown RBP11.23□□□□□ -0.61
RPGRIP1-207ENST00000555322 A1BGP04217 495 aa11.23□□□□□ -0.61
RPGRIP1-207ENST00000555322 CYP19A1P11511 503 aaPredicted RBP11.23□□□□□ -0.61
RPGRIP1-207ENST00000555322 IL6STP40189 918 aaPredicted RBP11.23□□□□□ -0.61
RPGRIP1-207ENST00000555322 G3BP1Q13283 466 aaKnown RBP eCLIP11.23□□□□□ -0.61
RPGRIP1-207ENST00000555322 DNAJC10Q8IXB1 793 aa11.23□□□□□ -0.61
RPGRIP1-207ENST00000555322 MAP3K15Q6ZN16 1313 aa11.23□□□□□ -0.61
RPGRIP1-207ENST00000555322 ERVV-1B6SEH8 477 aa11.23□□□□□ -0.61
RPGRIP1-207ENST00000555322 RGL2O15211 777 aa11.23□□□□□ -0.61
RPGRIP1-207ENST00000555322 TCIRG1Q13488 830 aa11.23□□□□□ -0.61
RPGRIP1-207ENST00000555322 FBXO3Q9UK99 471 aa11.23□□□□□ -0.61
RPGRIP1-207ENST00000555322 NUTM2BA6NNL0 878 aaPredicted RBP11.22□□□□□ -0.61
RPGRIP1-207ENST00000555322 NUTM2EB1AL46 878 aaPredicted RBP11.22□□□□□ -0.61
RPGRIP1-207ENST00000555322 TTLL7Q6ZT98 887 aa11.22□□□□□ -0.61
RPGRIP1-207ENST00000555322 TICAM2Q86XR7 235 aa11.22□□□□□ -0.61
RPGRIP1-207ENST00000555322 NUTM2AQ8IVF1 878 aaPredicted RBP11.22□□□□□ -0.61
RPGRIP1-207ENST00000555322 PI4K2BQ8TCG2 481 aa11.22□□□□□ -0.61
RPGRIP1-207ENST00000555322 PLA2G12BQ9BX93 195 aa11.22□□□□□ -0.61
RPGRIP1-207ENST00000555322 COL5A3P25940 1745 aaPredicted RBP11.22□□□□□ -0.61
RPGRIP1-207ENST00000555322 NHSQ6T4R5 1651 aa11.22□□□□□ -0.61
RPGRIP1-207ENST00000555322 CDHR2Q9BYE9 1310 aa11.22□□□□□ -0.61
RPGRIP1-207ENST00000555322 RFX5P48382 616 aaPredicted RBP11.21□□□□□ -0.61
RPGRIP1-207ENST00000555322 UBE3BQ7Z3V4 1068 aa11.21□□□□□ -0.61
RPGRIP1-207ENST00000555322 CERKQ8TCT0 537 aa11.21□□□□□ -0.61
RPGRIP1-207ENST00000555322 RFX7Q2KHR2 1363 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms