RNA–Protein interactions for RNA: ENST00000554980.5

TGFB3-202, Transcript of transforming growth factor beta 3, humanhuman

TSL 2

Gene TGFB3, Length 2,708 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-202ENST00000554980 FAM83GA6ND36 823 aa9.03□□□□□ -0.96
TGFB3-202ENST00000554980 SPDYE4A6NLX3 237 aa9.03□□□□□ -0.96
TGFB3-202ENST00000554980 KCNB2Q92953 911 aa9.03□□□□□ -0.96
TGFB3-202ENST00000554980 RGS12O14924 1447 aa9.03□□□□□ -0.96
TGFB3-202ENST00000554980 QRICH2Q9H0J4 1663 aa9.03□□□□□ -0.96
TGFB3-202ENST00000554980 CBFA2T2O43439 604 aa9.03□□□□□ -0.96
TGFB3-202ENST00000554980 IGHDP01880 384 aa9.03□□□□□ -0.96
TGFB3-202ENST00000554980 SRPK2P78362 688 aaKnown RBP9.03□□□□□ -0.96
TGFB3-202ENST00000554980 SPACA7Q96KW9 195 aa9.03□□□□□ -0.96
TGFB3-202ENST00000554980 RANBP17Q9H2T7 1088 aaKnown RBP9.03□□□□□ -0.96
TGFB3-202ENST00000554980 KAT6BQ8WYB5 2073 aa9.02□□□□□ -0.96
TGFB3-202ENST00000554980 SBNO1A3KN83 1393 aa9.02□□□□□ -0.96
TGFB3-202ENST00000554980 MARF1Q9Y4F3 1742 aaKnown RBP9.02□□□□□ -0.97
TGFB3-202ENST00000554980 ALS2Q96Q42 1657 aa9.02□□□□□ -0.97
TGFB3-202ENST00000554980 VDRP11473 427 aa9.02□□□□□ -0.97
TGFB3-202ENST00000554980 ZNF16P17020 682 aaPredicted RBP9.02□□□□□ -0.97
TGFB3-202ENST00000554980 HDLBPQ00341 1268 aaKnown RBP9.02□□□□□ -0.97
TGFB3-202ENST00000554980 DMTNQ08495 405 aa9.02□□□□□ -0.97
TGFB3-202ENST00000554980 EGFLAMQ63HQ2 1017 aa9.02□□□□□ -0.97
TGFB3-202ENST00000554980 RSPH1Q8WYR4 309 aa9.02□□□□□ -0.97
TGFB3-202ENST00000554980 CCDC94Q9BW85 323 aaPredicted RBP9.02□□□□□ -0.97
TGFB3-202ENST00000554980 CEP83Q9Y592 693 aa9.02□□□□□ -0.97
TGFB3-202ENST00000554980 CCDC61Q9Y6R9 512 aa9.02□□□□□ -0.97
TGFB3-202ENST00000554980 PEX19P40855 299 aa9.02□□□□□ -0.97
TGFB3-202ENST00000554980 PDE4DQ08499 809 aa9.02□□□□□ -0.97
TGFB3-202ENST00000554980 AGBL1Q96MI9 1066 aa9.02□□□□□ -0.97
TGFB3-202ENST00000554980 CABP1Q9NZU7 370 aa9.02□□□□□ -0.97
TGFB3-202ENST00000554980 ABCA3Q99758 1704 aa9.02□□□□□ -0.97
TGFB3-202ENST00000554980 TOPAZ1Q8N9V7 1692 aa9.01□□□□□ -0.97
TGFB3-202ENST00000554980 PPP1R12AO14974 1030 aaPredicted RBP9.01□□□□□ -0.97
TGFB3-202ENST00000554980 FLT3P36888 993 aa9.01□□□□□ -0.97
TGFB3-202ENST00000554980 CD151P48509 253 aa9.01□□□□□ -0.97
TGFB3-202ENST00000554980 RBM6P78332 1123 aaKnown RBP9.01□□□□□ -0.97
TGFB3-202ENST00000554980 ACRBPQ8NEB7 543 aa9.01□□□□□ -0.97
TGFB3-202ENST00000554980 RPS6KC1Q96S38 1066 aa9.01□□□□□ -0.97
TGFB3-202ENST00000554980 TONSLQ96HA7 1378 aa9.01□□□□□ -0.97
TGFB3-202ENST00000554980 PRR12Q9ULL5 1215 aa9.01□□□□□ -0.97
TGFB3-202ENST00000554980 ATRNO75882 1429 aa9□□□□□ -0.97
TGFB3-202ENST00000554980 GPRASP1Q5JY77 1395 aa9□□□□□ -0.97
TGFB3-202ENST00000554980 SF3A1Q15459 793 aaKnown RBP9□□□□□ -0.97
TGFB3-202ENST00000554980 CDC37Q16543 378 aaPredicted RBP9□□□□□ -0.97
TGFB3-202ENST00000554980 CALR3Q96L12 384 aaKnown RBP9□□□□□ -0.97
TGFB3-202ENST00000554980 PAGR1Q9BTK6 254 aa9□□□□□ -0.97
TGFB3-202ENST00000554980 CARD11Q9BXL7 1154 aa9□□□□□ -0.97
TGFB3-202ENST00000554980 SLIT2O94813 1529 aa9□□□□□ -0.97
TGFB3-202ENST00000554980 PPIP5K1Q6PFW1 1433 aa9□□□□□ -0.97
TGFB3-202ENST00000554980 POLR3AO14802 1390 aaPredicted RBP9□□□□□ -0.97
TGFB3-202ENST00000554980 TGFB3P10600 412 aa9□□□□□ -0.97
TGFB3-202ENST00000554980 TNNT2P45379 298 aaPredicted RBP9□□□□□ -0.97
TGFB3-202ENST00000554980 TBX4P57082 545 aa9□□□□□ -0.97
TGFB3-202ENST00000554980 SEZ6LQ9BYH1 1024 aa9□□□□□ -0.97
TGFB3-202ENST00000554980 ZBTB47Q9UFB7 747 aaPredicted RBP9□□□□□ -0.97
TGFB3-202ENST00000554980 PSMC1P62191 440 aaKnown RBP8.99□□□□□ -0.97
TGFB3-202ENST00000554980 PDAP1Q13442 181 aaKnown RBP8.99□□□□□ -0.97
TGFB3-202ENST00000554980 BIRC2Q13490 618 aa8.99□□□□□ -0.97
TGFB3-202ENST00000554980 CHRNA2Q15822 529 aa8.99□□□□□ -0.97
TGFB3-202ENST00000554980 UPF1Q92900 1129 aaKnown RBP eCLIP8.99□□□□□ -0.97
TGFB3-202ENST00000554980 NBPF3Q9H094 633 aa8.99□□□□□ -0.97
TGFB3-202ENST00000554980 CXorf56Q9H5V9 222 aa8.99□□□□□ -0.97
TGFB3-202ENST00000554980 TRPC5Q9UL62 973 aaPredicted RBP8.99□□□□□ -0.97
TGFB3-202ENST00000554980 MS4A1P11836 297 aa8.99□□□□□ -0.97
TGFB3-202ENST00000554980 UNC5CLQ8IV45 518 aa8.99□□□□□ -0.97
TGFB3-202ENST00000554980 GJD4Q96KN9 370 aaPredicted RBP8.99□□□□□ -0.97
TGFB3-202ENST00000554980 LRRC27Q9C0I9 530 aa8.99□□□□□ -0.97
TGFB3-202ENST00000554980 TMA7Q9Y2S6 64 aaKnown RBP8.99□□□□□ -0.97
TGFB3-202ENST00000554980 CRYBG1Q9Y4K1 1723 aa8.99□□□□□ -0.97
TGFB3-202ENST00000554980 ARHGEF10O15013 1369 aa8.99□□□□□ -0.97
TGFB3-202ENST00000554980 EIF3AQ14152 1382 aaKnown RBP8.99□□□□□ -0.97
TGFB3-202ENST00000554980 MPHOSPH10O00566 681 aaKnown RBP8.98□□□□□ -0.97
TGFB3-202ENST00000554980 CCT2P78371 535 aaKnown RBP8.98□□□□□ -0.97
TGFB3-202ENST00000554980 TBC1D10BQ4KMP7 808 aaPredicted RBP8.98□□□□□ -0.97
TGFB3-202ENST00000554980 PCGF5Q86SE9 256 aa8.98□□□□□ -0.97
TGFB3-202ENST00000554980 LSM14AQ8ND56 463 aaKnown RBP8.98□□□□□ -0.97
TGFB3-202ENST00000554980 ITSN1Q15811 1721 aa8.98□□□□□ -0.97
TGFB3-202ENST00000554980 GLI3P10071 1580 aa8.98□□□□□ -0.97
TGFB3-202ENST00000554980 HOXA2O43364 376 aa8.98□□□□□ -0.97
TGFB3-202ENST00000554980 PDILTQ8N807 584 aa8.98□□□□□ -0.97
TGFB3-202ENST00000554980 CWC25Q9NXE8 425 aaPredicted RBP8.98□□□□□ -0.97
TGFB3-202ENST00000554980 PLCH1Q4KWH8 1693 aa8.98□□□□□ -0.97
TGFB3-202ENST00000554980 BICDL2A1A5D9 508 aa8.97□□□□□ -0.97
TGFB3-202ENST00000554980 GIGYF1O75420 1035 aaPredicted RBP8.97□□□□□ -0.97
TGFB3-202ENST00000554980 TERF1P54274 439 aa8.97□□□□□ -0.97
TGFB3-202ENST00000554980 BTG4Q9NY30 223 aa8.97□□□□□ -0.97
TGFB3-202ENST00000554980 RALGAPBQ86X10 1494 aa8.97□□□□□ -0.97
TGFB3-202ENST00000554980 PES1O00541 588 aaKnown RBP8.97□□□□□ -0.97
TGFB3-202ENST00000554980 ABTB2Q8N961 1025 aa8.97□□□□□ -0.97
TGFB3-202ENST00000554980 ZNF512BQ96KM6 892 aaPredicted RBP8.97□□□□□ -0.97
TGFB3-202ENST00000554980 ATF5Q9Y2D1 282 aaPredicted RBP8.97□□□□□ -0.97
TGFB3-202ENST00000554980 SCINQ9Y6U3 715 aa8.97□□□□□ -0.97
TGFB3-202ENST00000554980 KIAA0232Q92628 1395 aa8.97□□□□□ -0.97
TGFB3-202ENST00000554980 LNPKQ9C0E8 428 aa8.96□□□□□ -0.97
TGFB3-202ENST00000554980 CDK12Q9NYV4 1490 aaPredicted RBP8.96□□□□□ -0.97
TGFB3-202ENST00000554980 ST20-MTHFSA0A0A6YYL1 179 aa8.96□□□□□ -0.98
TGFB3-202ENST00000554980 TRIM66O15016 1216 aa8.96□□□□□ -0.98
TGFB3-202ENST00000554980 NLGN1Q8N2Q7 840 aa8.96□□□□□ -0.98
TGFB3-202ENST00000554980 OGFOD1Q8N543 542 aa8.96□□□□□ -0.98
TGFB3-202ENST00000554980 CEP63Q96MT8 703 aa8.96□□□□□ -0.98
TGFB3-202ENST00000554980 ZRANB1Q9UGI0 708 aa8.96□□□□□ -0.98
TGFB3-202ENST00000554980 EVC2Q86UK5 1308 aa8.96□□□□□ -0.98
TGFB3-202ENST00000554980 PAX7P23759 505 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms