RNA–Protein interactions for RNA: ENST00000554945.1

SRP54-AS1-201, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

TSL 3

Gene SRP54-AS1, Length 600 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-201ENST00000554945 CHADLQ6NUI6 762 aa12.62□□□□□ -0.39
SRP54-AS1-201ENST00000554945 NPM2Q86SE8 214 aaKnown RBP12.62□□□□□ -0.39
SRP54-AS1-201ENST00000554945 SMC1BQ8NDV3 1235 aa12.62□□□□□ -0.39
SRP54-AS1-201ENST00000554945 FMNL2Q96PY5 1086 aa12.62□□□□□ -0.39
SRP54-AS1-201ENST00000554945 SSUH2Q9Y2M2 353 aa12.62□□□□□ -0.39
SRP54-AS1-201ENST00000554945 ANKRD31Q8N7Z5 1873 aa12.61□□□□□ -0.39
SRP54-AS1-201ENST00000554945 SCN7AQ01118 1682 aa12.61□□□□□ -0.39
SRP54-AS1-201ENST00000554945 CARMIL3Q8ND23 1372 aa12.61□□□□□ -0.39
SRP54-AS1-201ENST00000554945 VEGFAP15692 232 aaPredicted RBP12.61□□□□□ -0.39
SRP54-AS1-201ENST00000554945 CNGB1Q14028 1251 aaPredicted RBP12.61□□□□□ -0.39
SRP54-AS1-201ENST00000554945 KLRG1Q96E93 195 aa12.61□□□□□ -0.39
SRP54-AS1-201ENST00000554945 BRIP1Q9BX63 1249 aa12.61□□□□□ -0.39
SRP54-AS1-201ENST00000554945 ZNF330Q9Y3S2 320 aaPredicted RBP12.61□□□□□ -0.39
SRP54-AS1-201ENST00000554945 TIAM2Q8IVF5 1701 aa12.61□□□□□ -0.39
SRP54-AS1-201ENST00000554945 DICER1Q9UPY3 1922 aaKnown RBP12.6□□□□□ -0.39
SRP54-AS1-201ENST00000554945 CEMIPQ8WUJ3 1361 aa12.6□□□□□ -0.39
SRP54-AS1-201ENST00000554945 PRELPP51888 382 aa12.6□□□□□ -0.39
SRP54-AS1-201ENST00000554945 ZNF622Q969S3 477 aaKnown RBP eCLIP12.6□□□□□ -0.39
SRP54-AS1-201ENST00000554945 CFAP53Q96M91 514 aa12.6□□□□□ -0.39
SRP54-AS1-201ENST00000554945 SETDB2Q96T68 719 aa12.6□□□□□ -0.39
SRP54-AS1-201ENST00000554945 TBC1D2BQ9UPU7 963 aa12.6□□□□□ -0.39
SRP54-AS1-201ENST00000554945 FER1L6Q2WGJ9 1857 aa12.59□□□□□ -0.39
SRP54-AS1-201ENST00000554945 BTBD11A6QL63 1104 aa12.59□□□□□ -0.39
SRP54-AS1-201ENST00000554945 NFKBIEO00221 500 aa12.59□□□□□ -0.39
SRP54-AS1-201ENST00000554945 A1BGP04217 495 aa12.59□□□□□ -0.39
SRP54-AS1-201ENST00000554945 HTRA3P83110 453 aa12.59□□□□□ -0.39
SRP54-AS1-201ENST00000554945 PRR5LQ6MZQ0 368 aa12.59□□□□□ -0.39
SRP54-AS1-201ENST00000554945 DPY19L2Q6NUT2 758 aa12.59□□□□□ -0.39
SRP54-AS1-201ENST00000554945 JMYQ8N9B5 988 aa12.59□□□□□ -0.39
SRP54-AS1-201ENST00000554945 PRKAR2BP31323 418 aa12.58□□□□□ -0.4
SRP54-AS1-201ENST00000554945 PHACTR3Q96KR7 559 aa12.58□□□□□ -0.4
SRP54-AS1-201ENST00000554945 RSPH6AQ9H0K4 717 aa12.58□□□□□ -0.4
SRP54-AS1-201ENST00000554945 NUDCQ9Y266 331 aa12.58□□□□□ -0.4
SRP54-AS1-201ENST00000554945 BCORQ6W2J9 1755 aa12.58□□□□□ -0.4
SRP54-AS1-201ENST00000554945 COL11A2P13942 1736 aaPredicted RBP12.57□□□□□ -0.4
SRP54-AS1-201ENST00000554945 NPHP1O15259 732 aa12.57□□□□□ -0.4
SRP54-AS1-201ENST00000554945 C21orf2O43822 256 aa12.57□□□□□ -0.4
SRP54-AS1-201ENST00000554945 CAMTA2O94983 1202 aa12.57□□□□□ -0.4
SRP54-AS1-201ENST00000554945 ST5P78524 1137 aa12.57□□□□□ -0.4
SRP54-AS1-201ENST00000554945 DZIP3Q86Y13 1208 aaKnown RBP12.57□□□□□ -0.4
SRP54-AS1-201ENST00000554945 CNBD1Q8NA66 436 aa12.57□□□□□ -0.4
SRP54-AS1-201ENST00000554945 RTF1Q92541 710 aaKnown RBP12.57□□□□□ -0.4
SRP54-AS1-201ENST00000554945 USP16Q9Y5T5 823 aa12.57□□□□□ -0.4
SRP54-AS1-201ENST00000554945 PCNTO95613 3336 aa12.57□□□□□ -0.4
SRP54-AS1-201ENST00000554945 CACNA1SQ13698 1873 aa12.57□□□□□ -0.4
SRP54-AS1-201ENST00000554945 KCNQ3O43525 872 aa12.56□□□□□ -0.4
SRP54-AS1-201ENST00000554945 ERFEQ4G0M1 354 aa12.56□□□□□ -0.4
SRP54-AS1-201ENST00000554945 STYK1Q6J9G0 422 aa12.56□□□□□ -0.4
SRP54-AS1-201ENST00000554945 CLEC4GQ6UXB4 293 aa12.56□□□□□ -0.4
SRP54-AS1-201ENST00000554945 CCDC24Q8N4L8 307 aa12.56□□□□□ -0.4
SRP54-AS1-201ENST00000554945 CNKSR1Q969H4 720 aa12.56□□□□□ -0.4
SRP54-AS1-201ENST00000554945 LTBP3Q9NS15 1303 aa12.56□□□□□ -0.4
SRP54-AS1-201ENST00000554945 ARFGEF2Q9Y6D5 1785 aa12.56□□□□□ -0.4
SRP54-AS1-201ENST00000554945 SLX4Q8IY92 1834 aa12.55□□□□□ -0.4
SRP54-AS1-201ENST00000554945 SNRPA1P09661 255 aaKnown RBP12.55□□□□□ -0.4
SRP54-AS1-201ENST00000554945 SRGNP10124 158 aa12.55□□□□□ -0.4
SRP54-AS1-201ENST00000554945 SOGA3Q5TF21 947 aa12.55□□□□□ -0.4
SRP54-AS1-201ENST00000554945 MASTLQ96GX5 879 aa12.55□□□□□ -0.4
SRP54-AS1-201ENST00000554945 POTECB2RU33 542 aa12.54□□□□□ -0.4
SRP54-AS1-201ENST00000554945 HTATSF1O43719 755 aaKnown RBP12.54□□□□□ -0.4
SRP54-AS1-201ENST00000554945 U2AF1L5P0DN76 240 aaPredicted RBP12.54□□□□□ -0.4
SRP54-AS1-201ENST00000554945 U2AF1Q01081 240 aaKnown RBP eCLIP12.54□□□□□ -0.42e-6■□□□□ 8.5
SRP54-AS1-201ENST00000554945 TAOK3Q9H2K8 898 aa12.54□□□□□ -0.4
SRP54-AS1-201ENST00000554945 ZNF652Q9Y2D9 606 aa12.54□□□□□ -0.4
SRP54-AS1-201ENST00000554945 RGL2O15211 777 aa12.53□□□□□ -0.4
SRP54-AS1-201ENST00000554945 PRPF40BQ6NWY9 871 aaKnown RBP12.53□□□□□ -0.4
SRP54-AS1-201ENST00000554945 PRAMEF22A3QJZ6 481 aa12.52□□□□□ -0.41
SRP54-AS1-201ENST00000554945 PPP2R1AP30153 589 aa12.52□□□□□ -0.41
SRP54-AS1-201ENST00000554945 PIP4K2AP48426 406 aaPredicted RBP12.52□□□□□ -0.41
SRP54-AS1-201ENST00000554945 TPTE2Q6XPS3 522 aa12.52□□□□□ -0.41
SRP54-AS1-201ENST00000554945 MCM10Q7L590 875 aa12.52□□□□□ -0.41
SRP54-AS1-201ENST00000554945 NBPF5PQ86XG9 351 aaPredicted RBP12.52□□□□□ -0.41
SRP54-AS1-201ENST00000554945 NPR1P16066 1061 aa12.51□□□□□ -0.41
SRP54-AS1-201ENST00000554945 TAF7Q15545 349 aaPredicted RBP12.51□□□□□ -0.41
SRP54-AS1-201ENST00000554945 KLRG2A4D1S0 409 aaPredicted RBP12.5□□□□□ -0.41
SRP54-AS1-201ENST00000554945 DDNO94850 711 aaPredicted RBP12.5□□□□□ -0.41
SRP54-AS1-201ENST00000554945 DCTN1Q14203 1278 aa12.5□□□□□ -0.41
SRP54-AS1-201ENST00000554945 CCDC93Q567U6 631 aa12.5□□□□□ -0.41
SRP54-AS1-201ENST00000554945 COL13A1Q5TAT6 717 aaPredicted RBP12.5□□□□□ -0.41
SRP54-AS1-201ENST00000554945 C7orf43Q8WVR3 580 aa12.5□□□□□ -0.41
SRP54-AS1-201ENST00000554945 NIP7Q9Y221 180 aaKnown RBP eCLIP12.5□□□□□ -0.41
SRP54-AS1-201ENST00000554945 SCN4AP35499 1836 aa12.49□□□□□ -0.41
SRP54-AS1-201ENST00000554945 NBPF26B4DH59 902 aa12.49□□□□□ -0.41
SRP54-AS1-201ENST00000554945 NEFMP07197 916 aa12.49□□□□□ -0.41
SRP54-AS1-201ENST00000554945 NBPF10Q6P3W6 841 aaKnown RBP12.49□□□□□ -0.41
SRP54-AS1-201ENST00000554945 NBPF15Q8N660 670 aa12.49□□□□□ -0.41
SRP54-AS1-201ENST00000554945 DLG5Q8TDM6 1919 aa12.49□□□□□ -0.41
SRP54-AS1-201ENST00000554945 LAMB4A4D0S4 1761 aa12.48□□□□□ -0.41
SRP54-AS1-201ENST00000554945 IQCA1LA6NCM1 817 aa12.48□□□□□ -0.41
SRP54-AS1-201ENST00000554945 PRR29P0C7W0 189 aa12.48□□□□□ -0.41
SRP54-AS1-201ENST00000554945 ALDH1B1P30837 517 aa12.48□□□□□ -0.41
SRP54-AS1-201ENST00000554945 GTF2E1P29083 439 aaPredicted RBP12.47□□□□□ -0.41
SRP54-AS1-201ENST00000554945 FKBP4Q02790 459 aaKnown RBP eCLIP12.47□□□□□ -0.41
SRP54-AS1-201ENST00000554945 RTKN2Q8IZC4 609 aa12.47□□□□□ -0.41
SRP54-AS1-201ENST00000554945 PNISRQ8TF01 805 aaKnown RBP12.47□□□□□ -0.41
SRP54-AS1-201ENST00000554945 L3MBTL3Q96JM7 780 aaPredicted RBP12.47□□□□□ -0.41
SRP54-AS1-201ENST00000554945 CREBZFQ9NS37 354 aa12.47□□□□□ -0.41
SRP54-AS1-201ENST00000554945 NUP98P52948 1817 aa12.46□□□□□ -0.41
SRP54-AS1-201ENST00000554945 FAM177BA6PVY3 158 aa12.46□□□□□ -0.41
SRP54-AS1-201ENST00000554945 POTEIP0CG38 1075 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms