RNA–Protein interactions for RNA: ENST00000554621.1

CFAP54-206, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 3

Gene CFAP54, Length 724 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-206ENST00000554621 A1BGP04217 495 aa19.49■□□□□ 0.71
CFAP54-206ENST00000554621 CLEC4GQ6UXB4 293 aa19.49■□□□□ 0.71
CFAP54-206ENST00000554621 IL17REQ8NFR9 667 aa19.49■□□□□ 0.71
CFAP54-206ENST00000554621 RTF1Q92541 710 aaKnown RBP19.49■□□□□ 0.71
CFAP54-206ENST00000554621 CLEC11AQ9Y240 323 aa19.49■□□□□ 0.71
CFAP54-206ENST00000554621 CAMTA2O94983 1202 aa19.48■□□□□ 0.71
CFAP54-206ENST00000554621 NPR1P16066 1061 aa19.48■□□□□ 0.71
CFAP54-206ENST00000554621 TPTE2Q6XPS3 522 aa19.48■□□□□ 0.71
CFAP54-206ENST00000554621 KIF7Q2M1P5 1343 aa19.48■□□□□ 0.71
CFAP54-206ENST00000554621 DICER1Q9UPY3 1922 aaKnown RBP19.47■□□□□ 0.71
CFAP54-206ENST00000554621 SCN7AQ01118 1682 aa19.47■□□□□ 0.71
CFAP54-206ENST00000554621 GTF2E1P29083 439 aaPredicted RBP19.47■□□□□ 0.71
CFAP54-206ENST00000554621 CNGB1Q14028 1251 aaPredicted RBP19.47■□□□□ 0.71
CFAP54-206ENST00000554621 RTKN2Q8IZC4 609 aa19.47■□□□□ 0.71
CFAP54-206ENST00000554621 NUDCQ9Y266 331 aa19.47■□□□□ 0.71
CFAP54-206ENST00000554621 FER1L6Q2WGJ9 1857 aa19.46■□□□□ 0.71
CFAP54-206ENST00000554621 TMEM88BA6NKF7 163 aa19.46■□□□□ 0.71
CFAP54-206ENST00000554621 EAPPQ56P03 285 aaPredicted RBP19.46■□□□□ 0.71
CFAP54-206ENST00000554621 SNRPA1P09661 255 aaKnown RBP19.45■□□□□ 0.7
CFAP54-206ENST00000554621 ALDH1B1P30837 517 aa19.45■□□□□ 0.7
CFAP54-206ENST00000554621 CTCFP49711 727 aaPredicted RBP19.45■□□□□ 0.7
CFAP54-206ENST00000554621 PNMA8AQ86V59 439 aaPredicted RBP19.45■□□□□ 0.7
CFAP54-206ENST00000554621 L3MBTL3Q96JM7 780 aaPredicted RBP19.45■□□□□ 0.7
CFAP54-206ENST00000554621 TAF1DQ9H5J8 278 aaPredicted RBP19.45■□□□□ 0.7
CFAP54-206ENST00000554621 HACL1Q9UJ83 578 aa19.45■□□□□ 0.7
CFAP54-206ENST00000554621 ANKRD31Q8N7Z5 1873 aa19.45■□□□□ 0.7
CFAP54-206ENST00000554621 CNTNAP1P78357 1384 aa19.44■□□□□ 0.7
CFAP54-206ENST00000554621 FKBP4Q02790 459 aaKnown RBP eCLIP19.44■□□□□ 0.7
CFAP54-206ENST00000554621 PRDM10Q9NQV6 1147 aa19.44■□□□□ 0.7
CFAP54-206ENST00000554621 PER1O15534 1290 aaPredicted RBP19.43■□□□□ 0.7
CFAP54-206ENST00000554621 JDP2Q8WYK2 163 aa19.43■□□□□ 0.7
CFAP54-206ENST00000554621 RGL2O15211 777 aa19.42■□□□□ 0.7
CFAP54-206ENST00000554621 POTEIP0CG38 1075 aa19.42■□□□□ 0.7
CFAP54-206ENST00000554621 POTEJP0CG39 1038 aa19.42■□□□□ 0.7
CFAP54-206ENST00000554621 NIP7Q9Y221 180 aaKnown RBP eCLIP19.42■□□□□ 0.7
CFAP54-206ENST00000554621 PRKAR2BP31323 418 aa19.41■□□□□ 0.7
CFAP54-206ENST00000554621 ZNF277Q9NRM2 450 aaPredicted RBP19.41■□□□□ 0.7
CFAP54-206ENST00000554621 USP16Q9Y5T5 823 aa19.41■□□□□ 0.7
CFAP54-206ENST00000554621 COL11A2P13942 1736 aaPredicted RBP19.41■□□□□ 0.7
CFAP54-206ENST00000554621 CEMIPQ8WUJ3 1361 aa19.41■□□□□ 0.7
CFAP54-206ENST00000554621 SCN4AP35499 1836 aa19.4■□□□□ 0.7
CFAP54-206ENST00000554621 SLX4Q8IY92 1834 aa19.4■□□□□ 0.7
CFAP54-206ENST00000554621 FOXN1O15353 648 aa19.4■□□□□ 0.7
CFAP54-206ENST00000554621 NEFMP07197 916 aa19.4■□□□□ 0.7
CFAP54-206ENST00000554621 EPHX2P34913 555 aa19.4■□□□□ 0.7
CFAP54-206ENST00000554621 PASKQ96RG2 1323 aa19.4■□□□□ 0.7
CFAP54-206ENST00000554621 PCNTO95613 3336 aa19.4■□□□□ 0.7
CFAP54-206ENST00000554621 NPC1L1Q9UHC9 1359 aa19.4■□□□□ 0.7
CFAP54-206ENST00000554621 FAM177BA6PVY3 158 aa19.39■□□□□ 0.69
CFAP54-206ENST00000554621 NYXQ9GZU5 481 aa19.39■□□□□ 0.69
CFAP54-206ENST00000554621 TMX4Q9H1E5 349 aaPredicted RBP19.39■□□□□ 0.69
CFAP54-206ENST00000554621 KCNQ3O43525 872 aa19.38■□□□□ 0.69
CFAP54-206ENST00000554621 LMOD1P29536 600 aaPredicted RBP19.38■□□□□ 0.69
CFAP54-206ENST00000554621 IARSP41252 1262 aaKnown RBP19.38■□□□□ 0.69
CFAP54-206ENST00000554621 PIP4K2AP48426 406 aaPredicted RBP19.38■□□□□ 0.69
CFAP54-206ENST00000554621 VEGFBP49765 207 aa19.38■□□□□ 0.69
CFAP54-206ENST00000554621 EIF6P56537 245 aaKnown RBP19.38■□□□□ 0.69
CFAP54-206ENST00000554621 MAP2K1Q02750 393 aaPredicted RBP19.38■□□□□ 0.69
CFAP54-206ENST00000554621 CACNA1SQ13698 1873 aa19.38■□□□□ 0.69
CFAP54-206ENST00000554621 DEFB115Q30KQ5 88 aa19.38■□□□□ 0.69
CFAP54-206ENST00000554621 C7orf43Q8WVR3 580 aa19.38■□□□□ 0.69
CFAP54-206ENST00000554621 U2AF1L5P0DN76 240 aaPredicted RBP19.37■□□□□ 0.69
CFAP54-206ENST00000554621 U2AF1Q01081 240 aaKnown RBP eCLIP19.37■□□□□ 0.69
CFAP54-206ENST00000554621 GRIPAP1Q4V328 841 aa19.37■□□□□ 0.69
CFAP54-206ENST00000554621 CC2D2BQ6DHV5 1058 aa19.37■□□□□ 0.69
CFAP54-206ENST00000554621 CNTROBQ8N137 903 aa19.37■□□□□ 0.69
CFAP54-206ENST00000554621 GPC2Q8N158 579 aa19.37■□□□□ 0.69
CFAP54-206ENST00000554621 SYNE4Q8N205 404 aa19.37■□□□□ 0.69
CFAP54-206ENST00000554621 BEGAINQ9BUH8 593 aa19.37■□□□□ 0.69
CFAP54-206ENST00000554621 ABT1Q9ULW3 272 aaKnown RBP19.37■□□□□ 0.69
CFAP54-206ENST00000554621 ARFGEF2Q9Y6D5 1785 aa19.37■□□□□ 0.69
CFAP54-206ENST00000554621 KLRG2A4D1S0 409 aaPredicted RBP19.36■□□□□ 0.69
CFAP54-206ENST00000554621 PHACTR3Q96KR7 559 aa19.36■□□□□ 0.69
CFAP54-206ENST00000554621 SIPA1L3O60292 1781 aaPredicted RBP19.36■□□□□ 0.69
CFAP54-206ENST00000554621 BCORQ6W2J9 1755 aa19.35■□□□□ 0.69
CFAP54-206ENST00000554621 ZNF541Q9H0D2 1346 aa19.35■□□□□ 0.69
CFAP54-206ENST00000554621 HTATSF1O43719 755 aaKnown RBP19.35■□□□□ 0.69
CFAP54-206ENST00000554621 ITGBL1O95965 494 aaPredicted RBP19.35■□□□□ 0.69
CFAP54-206ENST00000554621 RPGRQ92834 1020 aaKnown RBP19.35■□□□□ 0.69
CFAP54-206ENST00000554621 RSPH6AQ9H0K4 717 aa19.35■□□□□ 0.69
CFAP54-206ENST00000554621 COL3A1P02461 1466 aaPredicted RBP19.35■□□□□ 0.69
CFAP54-206ENST00000554621 RNF123Q5XPI4 1314 aa19.34■□□□□ 0.69
CFAP54-206ENST00000554621 MCM10Q7L590 875 aa19.34■□□□□ 0.69
CFAP54-206ENST00000554621 WBP1LQ9NX94 342 aa19.34■□□□□ 0.69
CFAP54-206ENST00000554621 FZD9O00144 591 aa19.33■□□□□ 0.68
CFAP54-206ENST00000554621 LBX1P52954 281 aa19.33■□□□□ 0.68
CFAP54-206ENST00000554621 KIF6Q6ZMV9 814 aa19.33■□□□□ 0.68
CFAP54-206ENST00000554621 PAXIP1Q6ZW49 1069 aaPredicted RBP19.33■□□□□ 0.68
CFAP54-206ENST00000554621 PSMD1Q99460 953 aa19.33■□□□□ 0.68
CFAP54-206ENST00000554621 GJA3Q9Y6H8 435 aa19.33■□□□□ 0.68
CFAP54-206ENST00000554621 PRAMEF22A3QJZ6 481 aa19.32■□□□□ 0.68
CFAP54-206ENST00000554621 RASSF10A6NK89 507 aa19.32■□□□□ 0.68
CFAP54-206ENST00000554621 ECE1P42892 770 aa19.32■□□□□ 0.68
CFAP54-206ENST00000554621 TAF7Q15545 349 aaPredicted RBP19.32■□□□□ 0.68
CFAP54-206ENST00000554621 MAP1SQ66K74 1059 aaPredicted RBP19.32■□□□□ 0.68
CFAP54-206ENST00000554621 PNISRQ8TF01 805 aaKnown RBP19.32■□□□□ 0.68
CFAP54-206ENST00000554621 WDR33Q9C0J8 1336 aaKnown RBP19.3■□□□□ 0.68
CFAP54-206ENST00000554621 ERVV-1B6SEH8 477 aa19.3■□□□□ 0.68
CFAP54-206ENST00000554621 LARGE2Q8N3Y3 721 aa19.3■□□□□ 0.68
CFAP54-206ENST00000554621 NGEFQ8N5V2 710 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms