RNA–Protein interactions for RNA: ENST00000554327.5

ITGA7-208, Transcript of integrin subunit alpha 7, humanhuman

TSL 2

Gene ITGA7, Length 1,965 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-208ENST00000554327 MAP3K2Q9Y2U5 619 aa20.52■□□□□ 0.87
ITGA7-208ENST00000554327 ERBB4Q15303 1308 aa20.51■□□□□ 0.87
ITGA7-208ENST00000554327 KSR2Q6VAB6 950 aa20.51■□□□□ 0.87
ITGA7-208ENST00000554327 DCTPP1Q9H773 170 aa20.51■□□□□ 0.87
ITGA7-208ENST00000554327 ZNF831Q5JPB2 1677 aa20.51■□□□□ 0.87
ITGA7-208ENST00000554327 LY75O60449 1722 aa20.5■□□□□ 0.87
ITGA7-208ENST00000554327 LOC102724428A0A0B4J2F2 783 aa20.5■□□□□ 0.87
ITGA7-208ENST00000554327 SIK1P57059 783 aa20.5■□□□□ 0.87
ITGA7-208ENST00000554327 CYP19A1P11511 503 aaPredicted RBP20.5■□□□□ 0.87
ITGA7-208ENST00000554327 KRT27Q7Z3Y8 459 aa20.5■□□□□ 0.87
ITGA7-208ENST00000554327 TEX13AQ9BXU3 409 aaPredicted RBP20.5■□□□□ 0.87
ITGA7-208ENST00000554327 ATP6V1AP38606 617 aa20.49■□□□□ 0.87
ITGA7-208ENST00000554327 GNAI3P08754 354 aa20.48■□□□□ 0.87
ITGA7-208ENST00000554327 BEND3Q5T5X7 828 aa20.48■□□□□ 0.87
ITGA7-208ENST00000554327 RREB1Q92766 1687 aa20.48■□□□□ 0.87
ITGA7-208ENST00000554327 STARD3NLO95772 234 aa20.48■□□□□ 0.87
ITGA7-208ENST00000554327 DDX58O95786 925 aaKnown RBP20.48■□□□□ 0.87
ITGA7-208ENST00000554327 GNAI2P04899 355 aa20.48■□□□□ 0.87
ITGA7-208ENST00000554327 ITPK1Q13572 414 aa20.48■□□□□ 0.87
ITGA7-208ENST00000554327 TTLL7Q6ZT98 887 aa20.47■□□□□ 0.87
ITGA7-208ENST00000554327 RIC3Q7Z5B4 369 aa20.47■□□□□ 0.87
ITGA7-208ENST00000554327 SMARCC1Q92922 1105 aaPredicted RBP20.47■□□□□ 0.87
ITGA7-208ENST00000554327 TAF1LQ8IZX4 1826 aa20.47■□□□□ 0.87
ITGA7-208ENST00000554327 RXRBP28702 533 aa20.46■□□□□ 0.87
ITGA7-208ENST00000554327 KCNQ4P56696 695 aa20.46■□□□□ 0.87
ITGA7-208ENST00000554327 POTEAQ6S8J7 498 aa20.46■□□□□ 0.87
ITGA7-208ENST00000554327 ZBTB1Q9Y2K1 713 aa20.46■□□□□ 0.87
ITGA7-208ENST00000554327 NOP58Q9Y2X3 529 aaKnown RBP20.46■□□□□ 0.87
ITGA7-208ENST00000554327 ZNF330Q9Y3S2 320 aaPredicted RBP20.46■□□□□ 0.87
ITGA7-208ENST00000554327 SEC24BO95487 1268 aa20.46■□□□□ 0.87
ITGA7-208ENST00000554327 ANKRD13DQ6ZTN6 518 aa20.46■□□□□ 0.87
ITGA7-208ENST00000554327 SRCIN1Q9C0H9 1055 aa20.46■□□□□ 0.87
ITGA7-208ENST00000554327 HMMRO75330 724 aa20.45■□□□□ 0.86
ITGA7-208ENST00000554327 CWF19L2Q2TBE0 894 aaKnown RBP20.45■□□□□ 0.86
ITGA7-208ENST00000554327 ZBTB47Q9UFB7 747 aaPredicted RBP20.45■□□□□ 0.86
ITGA7-208ENST00000554327 ERICH6Q7L0X2 663 aa20.45■□□□□ 0.86
ITGA7-208ENST00000554327 USP44Q9H0E7 712 aa20.44■□□□□ 0.86
ITGA7-208ENST00000554327 FAM196AQ6ZSG2 479 aa20.43■□□□□ 0.86
ITGA7-208ENST00000554327 DDRGK1Q96HY6 314 aa20.43■□□□□ 0.86
ITGA7-208ENST00000554327 PRKCSHP14314 528 aaPredicted RBP20.43■□□□□ 0.86
ITGA7-208ENST00000554327 PLBD2Q8NHP8 589 aa20.43■□□□□ 0.86
ITGA7-208ENST00000554327 NUP98P52948 1817 aa20.42■□□□□ 0.86
ITGA7-208ENST00000554327 IGKV5-2P06315 115 aa20.42■□□□□ 0.86
ITGA7-208ENST00000554327 CRKLP46109 303 aaKnown RBP20.42■□□□□ 0.86
ITGA7-208ENST00000554327 INTS5Q6P9B9 1019 aaKnown RBP20.42■□□□□ 0.86
ITGA7-208ENST00000554327 MYD88Q99836 296 aa20.42■□□□□ 0.86
ITGA7-208ENST00000554327 METTL22Q9BUU2 404 aaPredicted RBP20.42■□□□□ 0.86
ITGA7-208ENST00000554327 BCL11BQ9C0K0 894 aaPredicted RBP20.41■□□□□ 0.86
ITGA7-208ENST00000554327 BCL11AQ9H165 835 aa20.41■□□□□ 0.86
ITGA7-208ENST00000554327 ZBTB3Q9H5J0 574 aa20.41■□□□□ 0.86
ITGA7-208ENST00000554327 NBPF7P0C2Y1 421 aaPredicted RBP20.41■□□□□ 0.86
ITGA7-208ENST00000554327 UBTFL1P0CB47 393 aaPredicted RBP20.41■□□□□ 0.86
ITGA7-208ENST00000554327 LINC00116Q8NCU8 138 aa20.41■□□□□ 0.86
ITGA7-208ENST00000554327 LINS1Q8NG48 757 aa20.41■□□□□ 0.86
ITGA7-208ENST00000554327 TRIM37O94972 964 aa20.4■□□□□ 0.86
ITGA7-208ENST00000554327 BMP2KLQ5H9B9 411 aa20.4■□□□□ 0.86
ITGA7-208ENST00000554327 LRRFIP2Q9Y608 721 aaKnown RBP20.4■□□□□ 0.86
ITGA7-208ENST00000554327 ANKRD36CQ5JPF3 1778 aa20.4■□□□□ 0.86
ITGA7-208ENST00000554327 ATP8B2P98198 1209 aa20.39■□□□□ 0.86
ITGA7-208ENST00000554327 CCDC87Q9NVE4 849 aa20.39■□□□□ 0.86
ITGA7-208ENST00000554327 ALDH1L1O75891 902 aa20.39■□□□□ 0.85
ITGA7-208ENST00000554327 NEURL1BA8MQ27 555 aa20.38■□□□□ 0.85
ITGA7-208ENST00000554327 ATP5J2-PTCD1G3V325 749 aa20.38■□□□□ 0.85
ITGA7-208ENST00000554327 NEXNQ0ZGT2 675 aa20.38■□□□□ 0.85
ITGA7-208ENST00000554327 ARXQ96QS3 562 aa20.38■□□□□ 0.85
ITGA7-208ENST00000554327 UPF2Q9HAU5 1272 aaKnown RBP20.38■□□□□ 0.85
ITGA7-208ENST00000554327 IL6STP40189 918 aaPredicted RBP20.37■□□□□ 0.85
ITGA7-208ENST00000554327 PLEKHM2Q8IWE5 1019 aa20.37■□□□□ 0.85
ITGA7-208ENST00000554327 CCNL1Q9UK58 526 aaPredicted RBP20.37■□□□□ 0.85
ITGA7-208ENST00000554327 PNMA6EA0A0J9YXQ4 647 aa20.36■□□□□ 0.85
ITGA7-208ENST00000554327 APBB1O00213 710 aa20.36■□□□□ 0.85
ITGA7-208ENST00000554327 C4BP0C0L5 1744 aa20.36■□□□□ 0.85
ITGA7-208ENST00000554327 EIF5P55010 431 aaKnown RBP20.35■□□□□ 0.85
ITGA7-208ENST00000554327 KIF6Q6ZMV9 814 aa20.35■□□□□ 0.85
ITGA7-208ENST00000554327 SMARCA5O60264 1052 aaPredicted RBP20.35■□□□□ 0.85
ITGA7-208ENST00000554327 GCKRQ14397 625 aa20.35■□□□□ 0.85
ITGA7-208ENST00000554327 C16orf71Q8IYS4 520 aaPredicted RBP20.35■□□□□ 0.85
ITGA7-208ENST00000554327 C9orf78Q9NZ63 289 aaPredicted RBP20.35■□□□□ 0.85
ITGA7-208ENST00000554327 TBC1D2BQ9UPU7 963 aa20.35■□□□□ 0.85
ITGA7-208ENST00000554327 BCORQ6W2J9 1755 aa20.35■□□□□ 0.85
ITGA7-208ENST00000554327 TNS1Q9HBL0 1735 aaKnown RBP20.35■□□□□ 0.85
ITGA7-208ENST00000554327 MAP3K15Q6ZN16 1313 aa20.34■□□□□ 0.85
ITGA7-208ENST00000554327 HLFQ16534 295 aa20.34■□□□□ 0.85
ITGA7-208ENST00000554327 GRM8O00222 908 aa20.34■□□□□ 0.85
ITGA7-208ENST00000554327 ANP32EQ9BTT0 268 aa20.34■□□□□ 0.85
ITGA7-208ENST00000554327 SMIM5Q71RC9 77 aa20.33■□□□□ 0.84
ITGA7-208ENST00000554327 DZIP3Q86Y13 1208 aaKnown RBP20.33■□□□□ 0.84
ITGA7-208ENST00000554327 JARID2Q92833 1246 aaPredicted RBP20.33■□□□□ 0.84
ITGA7-208ENST00000554327 TBC1D32Q96NH3 1257 aa20.33■□□□□ 0.84
ITGA7-208ENST00000554327 EXOC6BQ9Y2D4 811 aa20.33■□□□□ 0.84
ITGA7-208ENST00000554327 UTYO14607 1347 aa20.33■□□□□ 0.84
ITGA7-208ENST00000554327 LRRC4BQ9NT99 713 aa20.32■□□□□ 0.84
ITGA7-208ENST00000554327 CNTNAP4Q9C0A0 1308 aa20.32■□□□□ 0.84
ITGA7-208ENST00000554327 COL15A1P39059 1388 aa20.32■□□□□ 0.84
ITGA7-208ENST00000554327 OTUD7AQ8TE49 926 aaPredicted RBP20.32■□□□□ 0.84
ITGA7-208ENST00000554327 SSH3Q8TE77 659 aa20.32■□□□□ 0.84
ITGA7-208ENST00000554327 C4AP0C0L4 1744 aa20.31■□□□□ 0.84
ITGA7-208ENST00000554327 IBTKQ9P2D0 1353 aaPredicted RBP20.31■□□□□ 0.84
ITGA7-208ENST00000554327 MFAP1P55081 439 aaKnown RBP20.3■□□□□ 0.84
ITGA7-208ENST00000554327 TCIRG1Q13488 830 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms