RNA–Protein interactions for RNA: ENST00000554178.1

PTPN21-204, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 3

Gene PTPN21, Length 822 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-204ENST00000554178 CNGB1Q14028 1251 aaPredicted RBP13.23□□□□□ -0.29
PTPN21-204ENST00000554178 ZNF622Q969S3 477 aaKnown RBP eCLIP13.23□□□□□ -0.29
PTPN21-204ENST00000554178 MKRN1Q9UHC7 482 aaKnown RBP13.23□□□□□ -0.29
PTPN21-204ENST00000554178 POTECB2RU33 542 aa13.22□□□□□ -0.29
PTPN21-204ENST00000554178 C21orf2O43822 256 aa13.22□□□□□ -0.29
PTPN21-204ENST00000554178 TBC1D9BQ66K14 1250 aa13.22□□□□□ -0.29
PTPN21-204ENST00000554178 LAMB4A4D0S4 1761 aa13.22□□□□□ -0.29
PTPN21-204ENST00000554178 H0YIN7 160 aa13.21□□□□□ -0.29
PTPN21-204ENST00000554178 EIF4G2P78344 907 aaKnown RBP eCLIP13.21□□□□□ -0.29
PTPN21-204ENST00000554178 MTHFSDQ2M296 383 aaKnown RBP13.21□□□□□ -0.29
PTPN21-204ENST00000554178 PCGF6Q9BYE7 350 aa13.21□□□□□ -0.29
PTPN21-204ENST00000554178 TBC1D2BQ9UPU7 963 aa13.2□□□□□ -0.3
PTPN21-204ENST00000554178 COL3A1P02461 1466 aaPredicted RBP13.2□□□□□ -0.3
PTPN21-204ENST00000554178 DLG5Q8TDM6 1919 aa13.19□□□□□ -0.3
PTPN21-204ENST00000554178 PIP4K2AP48426 406 aaPredicted RBP13.19□□□□□ -0.3
PTPN21-204ENST00000554178 ERFEQ4G0M1 354 aa13.19□□□□□ -0.3
PTPN21-204ENST00000554178 PRR5LQ6MZQ0 368 aa13.19□□□□□ -0.3
PTPN21-204ENST00000554178 KNSTRNQ9Y448 316 aa13.19□□□□□ -0.3
PTPN21-204ENST00000554178 ADAMTSL1Q8N6G6 1762 aa13.19□□□□□ -0.3
PTPN21-204ENST00000554178 NPHP1O15259 732 aa13.18□□□□□ -0.3
PTPN21-204ENST00000554178 DDNO94850 711 aaPredicted RBP13.18□□□□□ -0.3
PTPN21-204ENST00000554178 TRIM26Q12899 539 aaPredicted RBP13.18□□□□□ -0.3
PTPN21-204ENST00000554178 TTC5Q8N0Z6 440 aa13.18□□□□□ -0.3
PTPN21-204ENST00000554178 NUP98P52948 1817 aa13.18□□□□□ -0.3
PTPN21-204ENST00000554178 ZNF496Q96IT1 587 aaPredicted RBP13.17□□□□□ -0.3
PTPN21-204ENST00000554178 TAOK3Q9H2K8 898 aa13.17□□□□□ -0.3
PTPN21-204ENST00000554178 HEG1Q9ULI3 1381 aa13.17□□□□□ -0.3
PTPN21-204ENST00000554178 TRPM7Q96QT4 1865 aa13.16□□□□□ -0.3
PTPN21-204ENST00000554178 EIF5P55010 431 aaKnown RBP13.16□□□□□ -0.3
PTPN21-204ENST00000554178 AMER1Q5JTC6 1135 aaPredicted RBP13.16□□□□□ -0.3
PTPN21-204ENST00000554178 CC2D1BQ5T0F9 858 aaKnown RBP13.16□□□□□ -0.3
PTPN21-204ENST00000554178 PRPF40BQ6NWY9 871 aaKnown RBP13.16□□□□□ -0.3
PTPN21-204ENST00000554178 CNBD1Q8NA66 436 aa13.16□□□□□ -0.3
PTPN21-204ENST00000554178 FOXN1O15353 648 aa13.15□□□□□ -0.3
PTPN21-204ENST00000554178 DPY19L2Q6NUT2 758 aa13.15□□□□□ -0.3
PTPN21-204ENST00000554178 LTBP1Q14766 1721 aa13.15□□□□□ -0.3
PTPN21-204ENST00000554178 ZNF541Q9H0D2 1346 aa13.14□□□□□ -0.31
PTPN21-204ENST00000554178 U2SURPO15042 1029 aaKnown RBP13.14□□□□□ -0.31
PTPN21-204ENST00000554178 DIAPH1O60610 1272 aaKnown RBP13.14□□□□□ -0.31
PTPN21-204ENST00000554178 STARD3NLO95772 234 aa13.14□□□□□ -0.31
PTPN21-204ENST00000554178 A1BGP04217 495 aa13.14□□□□□ -0.31
PTPN21-204ENST00000554178 PDE6BP35913 854 aa13.14□□□□□ -0.31
PTPN21-204ENST00000554178 TEFQ10587 303 aa13.14□□□□□ -0.31
PTPN21-204ENST00000554178 OLFM4Q6UX06 510 aa13.14□□□□□ -0.31
PTPN21-204ENST00000554178 VSIG10Q8N0Z9 540 aa13.14□□□□□ -0.31
PTPN21-204ENST00000554178 KIF7Q2M1P5 1343 aa13.13□□□□□ -0.31
PTPN21-204ENST00000554178 CNTNAP1P78357 1384 aa13.13□□□□□ -0.31
PTPN21-204ENST00000554178 A0A087WZG4 1122 aa13.13□□□□□ -0.31
PTPN21-204ENST00000554178 KCNQ3O43525 872 aa13.13□□□□□ -0.31
PTPN21-204ENST00000554178 EAPPQ56P03 285 aaPredicted RBP13.13□□□□□ -0.31
PTPN21-204ENST00000554178 BRIP1Q9BX63 1249 aa13.13□□□□□ -0.31
PTPN21-204ENST00000554178 PRAMEF22A3QJZ6 481 aa13.12□□□□□ -0.31
PTPN21-204ENST00000554178 FAM177BA6PVY3 158 aa13.12□□□□□ -0.31
PTPN21-204ENST00000554178 CAMTA2O94983 1202 aa13.12□□□□□ -0.31
PTPN21-204ENST00000554178 ST5P78524 1137 aa13.12□□□□□ -0.31
PTPN21-204ENST00000554178 ZNF790Q6PG37 636 aa13.12□□□□□ -0.31
PTPN21-204ENST00000554178 TIMELESSQ9UNS1 1208 aa13.12□□□□□ -0.31
PTPN21-204ENST00000554178 THSD7BQ9C0I4 1608 aa13.12□□□□□ -0.31
PTPN21-204ENST00000554178 KDM3BQ7LBC6 1761 aa13.12□□□□□ -0.31
PTPN21-204ENST00000554178 LTBP3Q9NS15 1303 aa13.12□□□□□ -0.31
PTPN21-204ENST00000554178 COL4A5P29400 1685 aa13.12□□□□□ -0.31
PTPN21-204ENST00000554178 MNX1P50219 401 aaPredicted RBP13.11□□□□□ -0.31
PTPN21-204ENST00000554178 DZIP3Q86Y13 1208 aaKnown RBP13.11□□□□□ -0.31
PTPN21-204ENST00000554178 IL17REQ8NFR9 667 aa13.11□□□□□ -0.31
PTPN21-204ENST00000554178 SETDB2Q96T68 719 aa13.11□□□□□ -0.31
PTPN21-204ENST00000554178 LAMB2P55268 1798 aa13.11□□□□□ -0.31
PTPN21-204ENST00000554178 SRGNP10124 158 aa13.1□□□□□ -0.31
PTPN21-204ENST00000554178 ZNF277Q9NRM2 450 aaPredicted RBP13.1□□□□□ -0.31
PTPN21-204ENST00000554178 RNF123Q5XPI4 1314 aa13.1□□□□□ -0.31
PTPN21-204ENST00000554178 GNAT3A8MTJ3 354 aa13.09□□□□□ -0.31
PTPN21-204ENST00000554178 IL6STP40189 918 aaPredicted RBP13.09□□□□□ -0.31
PTPN21-204ENST00000554178 VEGFBP49765 207 aa13.09□□□□□ -0.31
PTPN21-204ENST00000554178 STYK1Q6J9G0 422 aa13.09□□□□□ -0.31
PTPN21-204ENST00000554178 NPM2Q86SE8 214 aaKnown RBP13.09□□□□□ -0.31
PTPN21-204ENST00000554178 SLC51AQ86UW1 340 aa13.09□□□□□ -0.31
PTPN21-204ENST00000554178 NBPF5PQ86XG9 351 aaPredicted RBP13.09□□□□□ -0.31
PTPN21-204ENST00000554178 CNKSR1Q969H4 720 aa13.09□□□□□ -0.31
PTPN21-204ENST00000554178 FMNL2Q96PY5 1086 aa13.09□□□□□ -0.31
PTPN21-204ENST00000554178 TAF1DQ9H5J8 278 aaPredicted RBP13.09□□□□□ -0.31
PTPN21-204ENST00000554178 PASKQ96RG2 1323 aa13.09□□□□□ -0.31
PTPN21-204ENST00000554178 TAF1P21675 1872 aa13.08□□□□□ -0.32
PTPN21-204ENST00000554178 CCDC93Q567U6 631 aa13.08□□□□□ -0.32
PTPN21-204ENST00000554178 LDHDQ86WU2 507 aa13.08□□□□□ -0.32
PTPN21-204ENST00000554178 AIDAQ96BJ3 306 aa13.08□□□□□ -0.32
PTPN21-204ENST00000554178 MASTLQ96GX5 879 aa13.08□□□□□ -0.32
PTPN21-204ENST00000554178 ABCC12Q96J65 1359 aa13.07□□□□□ -0.32
PTPN21-204ENST00000554178 ANKRD36CQ5JPF3 1778 aa13.07□□□□□ -0.32
PTPN21-204ENST00000554178 CASP8AP2Q9UKL3 1982 aa13.07□□□□□ -0.32
PTPN21-204ENST00000554178 IQCA1LA6NCM1 817 aa13.07□□□□□ -0.32
PTPN21-204ENST00000554178 MAP1SQ66K74 1059 aaPredicted RBP13.07□□□□□ -0.32
PTPN21-204ENST00000554178 GAS2L2Q8NHY3 880 aa13.07□□□□□ -0.32
PTPN21-204ENST00000554178 CEMIPQ8WUJ3 1361 aa13.07□□□□□ -0.32
PTPN21-204ENST00000554178 BTBD11A6QL63 1104 aa13.06□□□□□ -0.32
PTPN21-204ENST00000554178 PRKAR2BP31323 418 aa13.06□□□□□ -0.32
PTPN21-204ENST00000554178 LBX1P52954 281 aa13.06□□□□□ -0.32
PTPN21-204ENST00000554178 GRM1Q13255 1194 aa13.06□□□□□ -0.32
PTPN21-204ENST00000554178 PHACTR3Q96KR7 559 aa13.06□□□□□ -0.32
PTPN21-204ENST00000554178 PDZRN3Q9UPQ7 1066 aa13.06□□□□□ -0.32
PTPN21-204ENST00000554178 USP16Q9Y5T5 823 aa13.06□□□□□ -0.32
PTPN21-204ENST00000554178 CLSPNQ9HAW4 1339 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms