RNA–Protein interactions for RNA: ENST00000553927.1

RPGRIP1-204, Transcript of RPGR interacting protein 1, humanhuman

TSL 2

Gene RPGRIP1, Length 2,875 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-204ENST00000553927 HSPA4P34932 840 aa8.04□□□□□ -1.12
RPGRIP1-204ENST00000553927 ERO1AQ96HE7 468 aa8.04□□□□□ -1.12
RPGRIP1-204ENST00000553927 JAKMIP1Q96N16 626 aaKnown RBP8.04□□□□□ -1.12
RPGRIP1-204ENST00000553927 LRRFIP2Q9Y608 721 aaKnown RBP8.04□□□□□ -1.12
RPGRIP1-204ENST00000553927 TULP4Q9NRJ4 1543 aa8.03□□□□□ -1.12
RPGRIP1-204ENST00000553927 ANAPC15P60006 121 aa8.03□□□□□ -1.12
RPGRIP1-204ENST00000553927 CCDC191Q8NCU4 936 aa8.03□□□□□ -1.12
RPGRIP1-204ENST00000553927 KIF1BPQ96EK5 621 aa8.03□□□□□ -1.12
RPGRIP1-204ENST00000553927 CABP1Q9NZU7 370 aa8.03□□□□□ -1.12
RPGRIP1-204ENST00000553927 PLCH2O75038 1416 aa8.03□□□□□ -1.12
RPGRIP1-204ENST00000553927 FAM135BQ49AJ0 1406 aa8.03□□□□□ -1.12
RPGRIP1-204ENST00000553927 NSD2O96028 1365 aa8.03□□□□□ -1.12
RPGRIP1-204ENST00000553927 ANKRD65E5RJM6 399 aa8.03□□□□□ -1.12
RPGRIP1-204ENST00000553927 GOLGA6L19H0YKK7 550 aa8.03□□□□□ -1.12
RPGRIP1-204ENST00000553927 IFIT2P09913 472 aaKnown RBP8.03□□□□□ -1.12
RPGRIP1-204ENST00000553927 ZNF853P0CG23 659 aa8.03□□□□□ -1.12
RPGRIP1-204ENST00000553927 LARP1BQ659C4 914 aaKnown RBP8.03□□□□□ -1.12
RPGRIP1-204ENST00000553927 FAM177A1Q8N128 213 aaPredicted RBP8.03□□□□□ -1.12
RPGRIP1-204ENST00000553927 RGS22Q8NE09 1264 aa8.03□□□□□ -1.12
RPGRIP1-204ENST00000553927 DDX11Q96FC9 970 aa8.03□□□□□ -1.12
RPGRIP1-204ENST00000553927 STAG3Q9UJ98 1225 aa8.03□□□□□ -1.12
RPGRIP1-204ENST00000553927 MROH2AA6NES4 1674 aa8.02□□□□□ -1.12
RPGRIP1-204ENST00000553927 MRC2Q9UBG0 1479 aa8.02□□□□□ -1.13
RPGRIP1-204ENST00000553927 KRT85P78386 507 aa8.02□□□□□ -1.13
RPGRIP1-204ENST00000553927 SLC20A2Q08357 652 aa8.02□□□□□ -1.13
RPGRIP1-204ENST00000553927 ST3GAL1Q11201 340 aa8.02□□□□□ -1.13
RPGRIP1-204ENST00000553927 BMS1Q14692 1282 aaKnown RBP8.02□□□□□ -1.13
RPGRIP1-204ENST00000553927 PTPN21Q16825 1174 aa8.02□□□□□ -1.13
RPGRIP1-204ENST00000553927 PRPF40BQ6NWY9 871 aaKnown RBP8.02□□□□□ -1.13
RPGRIP1-204ENST00000553927 SECISBP2LQ93073 1101 aaKnown RBP8.02□□□□□ -1.13
RPGRIP1-204ENST00000553927 SPATA32Q96LK8 384 aa8.02□□□□□ -1.13
RPGRIP1-204ENST00000553927 TTC14Q96N46 770 aa8.02□□□□□ -1.13
RPGRIP1-204ENST00000553927 LOC102724159A0A0B4J2E5 919 aa8.02□□□□□ -1.13
RPGRIP1-204ENST00000553927 SOX12O15370 315 aa8.02□□□□□ -1.13
RPGRIP1-204ENST00000553927 PWP2Q15269 919 aaKnown RBP8.02□□□□□ -1.13
RPGRIP1-204ENST00000553927 NYAP1Q6ZVC0 841 aa8.02□□□□□ -1.13
RPGRIP1-204ENST00000553927 CCAR2Q8N163 923 aaKnown RBP8.02□□□□□ -1.13
RPGRIP1-204ENST00000553927 RASSF4Q9H2L5 321 aa8.02□□□□□ -1.13
RPGRIP1-204ENST00000553927 TERF2IPQ9NYB0 399 aa8.02□□□□□ -1.13
RPGRIP1-204ENST00000553927 FAM53CQ9NYF3 392 aa8.02□□□□□ -1.13
RPGRIP1-204ENST00000553927 MYOM2P54296 1465 aa8.02□□□□□ -1.13
RPGRIP1-204ENST00000553927 PTPRCP08575 1304 aa8.01□□□□□ -1.13
RPGRIP1-204ENST00000553927 CCDC171Q6TFL3 1326 aa8.01□□□□□ -1.13
RPGRIP1-204ENST00000553927 SNW1Q13573 536 aaKnown RBP8.01□□□□□ -1.13
RPGRIP1-204ENST00000553927 ME3Q16798 604 aa8.01□□□□□ -1.13
RPGRIP1-204ENST00000553927 GGT6Q6P531 493 aa8.01□□□□□ -1.13
RPGRIP1-204ENST00000553927 OSBPL3Q9H4L5 887 aa8.01□□□□□ -1.13
RPGRIP1-204ENST00000553927 PDRG1Q9NUG6 133 aa8.01□□□□□ -1.13
RPGRIP1-204ENST00000553927 RIMS2Q9UQ26 1411 aa8.01□□□□□ -1.13
RPGRIP1-204ENST00000553927 CCZ1BP86790 482 aa8.01□□□□□ -1.13
RPGRIP1-204ENST00000553927 CCZ1P86791 482 aaPredicted RBP8.01□□□□□ -1.13
RPGRIP1-204ENST00000553927 SKIDA1Q1XH10 827 aa8.01□□□□□ -1.13
RPGRIP1-204ENST00000553927 HOMER1Q86YM7 354 aa8.01□□□□□ -1.13
RPGRIP1-204ENST00000553927 PRAM1Q96QH2 718 aa8.01□□□□□ -1.13
RPGRIP1-204ENST00000553927 FTOQ9C0B1 505 aaKnown RBP eCLIP8.01□□□□□ -1.13
RPGRIP1-204ENST00000553927 HYPKQ9NX55 129 aa8.01□□□□□ -1.13
RPGRIP1-204ENST00000553927 BECN2A8MW95 431 aa8□□□□□ -1.13
RPGRIP1-204ENST00000553927 MYO1CO00159 1063 aa8□□□□□ -1.13
RPGRIP1-204ENST00000553927 OAS2P29728 719 aaKnown RBP8□□□□□ -1.13
RPGRIP1-204ENST00000553927 LMAN1P49257 510 aa8□□□□□ -1.13
RPGRIP1-204ENST00000553927 PTH1RQ03431 593 aa8□□□□□ -1.13
RPGRIP1-204ENST00000553927 TDRD7Q8NHU6 1098 aaKnown RBP8□□□□□ -1.13
RPGRIP1-204ENST00000553927 FMNL2Q96PY5 1086 aa8□□□□□ -1.13
RPGRIP1-204ENST00000553927 KIAA1210Q9ULL0 1709 aa8□□□□□ -1.13
RPGRIP1-204ENST00000553927 GNAI2P04899 355 aa8□□□□□ -1.13
RPGRIP1-204ENST00000553927 H2AFXP16104 143 aaPredicted RBP8□□□□□ -1.13
RPGRIP1-204ENST00000553927 GNL2Q13823 731 aaKnown RBP8□□□□□ -1.13
RPGRIP1-204ENST00000553927 ZSCAN26Q16670 478 aa8□□□□□ -1.13
RPGRIP1-204ENST00000553927 TMCO3Q6UWJ1 677 aa8□□□□□ -1.13
RPGRIP1-204ENST00000553927 SALL3Q9BXA9 1300 aa8□□□□□ -1.13
RPGRIP1-204ENST00000553927 HTATSF1O43719 755 aaKnown RBP8□□□□□ -1.13
RPGRIP1-204ENST00000553927 SASH3O75995 380 aa8□□□□□ -1.13
RPGRIP1-204ENST00000553927 GTF2A1P52655 376 aaPredicted RBP8□□□□□ -1.13
RPGRIP1-204ENST00000553927 LARP1Q6PKG0 1096 aaKnown RBP8□□□□□ -1.13
RPGRIP1-204ENST00000553927 HDGFL2Q7Z4V5 671 aaPredicted RBP8□□□□□ -1.13
RPGRIP1-204ENST00000553927 GPATCH11Q8N954 259 aa8□□□□□ -1.13
RPGRIP1-204ENST00000553927 PGBD1Q96JS3 809 aa8□□□□□ -1.13
RPGRIP1-204ENST00000553927 CLSTN2Q9H4D0 955 aa8□□□□□ -1.13
RPGRIP1-204ENST00000553927 DNAI1Q9UI46 699 aa8□□□□□ -1.13
RPGRIP1-204ENST00000553927 TPCN1Q9ULQ1 816 aa8□□□□□ -1.13
RPGRIP1-204ENST00000553927 INO80Q9ULG1 1556 aaPredicted RBP8□□□□□ -1.13
RPGRIP1-204ENST00000553927 MYO3AQ8NEV4 1616 aa7.99□□□□□ -1.13
RPGRIP1-204ENST00000553927 DHX16O60231 1041 aaKnown RBP7.99□□□□□ -1.13
RPGRIP1-204ENST00000553927 GOLGA8FQ08AF8 430 aa7.99□□□□□ -1.13
RPGRIP1-204ENST00000553927 GOLGA8DPQ0D2H9 430 aa7.99□□□□□ -1.13
RPGRIP1-204ENST00000553927 TEX35Q5T0J7 233 aa7.99□□□□□ -1.13
RPGRIP1-204ENST00000553927 NME9Q86XW9 330 aa7.99□□□□□ -1.13
RPGRIP1-204ENST00000553927 AOPEPQ8N6M6 819 aa7.99□□□□□ -1.13
RPGRIP1-204ENST00000553927 LEO1Q8WVC0 666 aaPredicted RBP7.99□□□□□ -1.13
RPGRIP1-204ENST00000553927 LSG1Q9H089 658 aaKnown RBP7.99□□□□□ -1.13
RPGRIP1-204ENST00000553927 VWDEQ8N2E2 1590 aa7.99□□□□□ -1.13
RPGRIP1-204ENST00000553927 SGSM2O43147 1006 aa7.99□□□□□ -1.13
RPGRIP1-204ENST00000553927 SMC2O95347 1197 aa7.99□□□□□ -1.13
RPGRIP1-204ENST00000553927 SART3Q15020 963 aaKnown RBP7.99□□□□□ -1.13
RPGRIP1-204ENST00000553927 E4F1Q66K89 784 aaPredicted RBP7.99□□□□□ -1.13
RPGRIP1-204ENST00000553927 PPP1R13BQ96KQ4 1090 aa7.99□□□□□ -1.13
RPGRIP1-204ENST00000553927 PLEKHA4Q9H4M7 779 aa7.99□□□□□ -1.13
RPGRIP1-204ENST00000553927 USP32Q8NFA0 1604 aa7.99□□□□□ -1.13
RPGRIP1-204ENST00000553927 URI1O94763 535 aaPredicted RBP7.98□□□□□ -1.13
RPGRIP1-204ENST00000553927 PRR29P0C7W0 189 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms