RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 CNKSR1Q969H4 720 aa13.17□□□□□ -0.3
ACTN1-210ENST00000553779 PHACTR3Q96KR7 559 aa13.17□□□□□ -0.3
ACTN1-210ENST00000553779 GLTPD2A6NH11 291 aa13.16□□□□□ -0.3
ACTN1-210ENST00000553779 SNRPA1P09661 255 aaKnown RBP13.16□□□□□ -0.3
ACTN1-210ENST00000553779 HTRA3P83110 453 aa13.16□□□□□ -0.3
ACTN1-210ENST00000553779 ERFEQ4G0M1 354 aa13.16□□□□□ -0.3
ACTN1-210ENST00000553779 SOGA3Q5TF21 947 aa13.16□□□□□ -0.3
ACTN1-210ENST00000553779 TAOK3Q9H2K8 898 aa13.16□□□□□ -0.3
ACTN1-210ENST00000553779 KDM3BQ7LBC6 1761 aa13.16□□□□□ -0.3
ACTN1-210ENST00000553779 PCNTO95613 3336 aa13.16□□□□□ -0.3
ACTN1-210ENST00000553779 NFKBIEO00221 500 aa13.15□□□□□ -0.3
ACTN1-210ENST00000553779 KCNQ3O43525 872 aa13.15□□□□□ -0.3
ACTN1-210ENST00000553779 CAMTA2O94983 1202 aa13.15□□□□□ -0.3
ACTN1-210ENST00000553779 GTF2E1P29083 439 aaPredicted RBP13.15□□□□□ -0.3
ACTN1-210ENST00000553779 PPP2R1AP30153 589 aa13.15□□□□□ -0.3
ACTN1-210ENST00000553779 KLRG1Q96E93 195 aa13.15□□□□□ -0.3
ACTN1-210ENST00000553779 SCN4AP35499 1836 aa13.15□□□□□ -0.3
ACTN1-210ENST00000553779 FAM177BA6PVY3 158 aa13.14□□□□□ -0.31
ACTN1-210ENST00000553779 PRPF40BQ6NWY9 871 aaKnown RBP13.14□□□□□ -0.31
ACTN1-210ENST00000553779 MASTLQ96GX5 879 aa13.14□□□□□ -0.31
ACTN1-210ENST00000553779 DCTN1Q14203 1278 aa13.13□□□□□ -0.31
ACTN1-210ENST00000553779 STYK1Q6J9G0 422 aa13.13□□□□□ -0.31
ACTN1-210ENST00000553779 NIP7Q9Y221 180 aaKnown RBP eCLIP13.13□□□□□ -0.31
ACTN1-210ENST00000553779 MAPK8IP3Q9UPT6 1336 aa13.13□□□□□ -0.31
ACTN1-210ENST00000553779 DNAJC5GQ8N7S2 189 aa13.12□□□□□ -0.31
ACTN1-210ENST00000553779 USP16Q9Y5T5 823 aa13.12□□□□□ -0.31
ACTN1-210ENST00000553779 PRAMEF22A3QJZ6 481 aa13.11□□□□□ -0.31
ACTN1-210ENST00000553779 CCDC93Q567U6 631 aa13.11□□□□□ -0.31
ACTN1-210ENST00000553779 CLEC4GQ6UXB4 293 aa13.11□□□□□ -0.31
ACTN1-210ENST00000553779 TPTE2Q6XPS3 522 aa13.11□□□□□ -0.31
ACTN1-210ENST00000553779 KIF6Q6ZMV9 814 aa13.11□□□□□ -0.31
ACTN1-210ENST00000553779 NGEFQ8N5V2 710 aa13.11□□□□□ -0.31
ACTN1-210ENST00000553779 HTATSF1O43719 755 aaKnown RBP13.1□□□□□ -0.31
ACTN1-210ENST00000553779 SRGNP10124 158 aa13.1□□□□□ -0.31
ACTN1-210ENST00000553779 NPR1P16066 1061 aa13.1□□□□□ -0.31
ACTN1-210ENST00000553779 PRELPP51888 382 aa13.1□□□□□ -0.31
ACTN1-210ENST00000553779 TAF7Q15545 349 aaPredicted RBP13.1□□□□□ -0.31
ACTN1-210ENST00000553779 PNISRQ8TF01 805 aaKnown RBP13.1□□□□□ -0.31
ACTN1-210ENST00000553779 LTBP3Q9NS15 1303 aa13.1□□□□□ -0.31
ACTN1-210ENST00000553779 PNNQ9H307 717 aaKnown RBP13.09□□□□□ -0.31
ACTN1-210ENST00000553779 ANKRD36CQ5JPF3 1778 aa13.08□□□□□ -0.32
ACTN1-210ENST00000553779 IQCA1LA6NCM1 817 aa13.08□□□□□ -0.32
ACTN1-210ENST00000553779 NYXQ9GZU5 481 aa13.08□□□□□ -0.32
ACTN1-210ENST00000553779 MIS18AQ9NYP9 233 aa13.08□□□□□ -0.32
ACTN1-210ENST00000553779 CHADLQ6NUI6 762 aa13.07□□□□□ -0.32
ACTN1-210ENST00000553779 RPGRQ92834 1020 aaKnown RBP13.07□□□□□ -0.32
ACTN1-210ENST00000553779 RRP7AQ9Y3A4 280 aaKnown RBP13.07□□□□□ -0.32
ACTN1-210ENST00000553779 NBPF26B4DH59 902 aa13.06□□□□□ -0.32
ACTN1-210ENST00000553779 DDNO94850 711 aaPredicted RBP13.06□□□□□ -0.32
ACTN1-210ENST00000553779 MYL6BP14649 208 aa13.06□□□□□ -0.32
ACTN1-210ENST00000553779 FKBP4Q02790 459 aaKnown RBP eCLIP13.06□□□□□ -0.32
ACTN1-210ENST00000553779 EAPPQ56P03 285 aaPredicted RBP13.06□□□□□ -0.32
ACTN1-210ENST00000553779 NBPF10Q6P3W6 841 aaKnown RBP13.06□□□□□ -0.32
ACTN1-210ENST00000553779 RTKN2Q8IZC4 609 aa13.06□□□□□ -0.32
ACTN1-210ENST00000553779 NBPF15Q8N660 670 aa13.06□□□□□ -0.32
ACTN1-210ENST00000553779 JMYQ8N9B5 988 aa13.06□□□□□ -0.32
ACTN1-210ENST00000553779 ZNF277Q9NRM2 450 aaPredicted RBP13.06□□□□□ -0.32
ACTN1-210ENST00000553779 CLEC11AQ9Y240 323 aa13.06□□□□□ -0.32
ACTN1-210ENST00000553779 CAPN15O75808 1086 aa13.05□□□□□ -0.32
ACTN1-210ENST00000553779 ALDH1B1P30837 517 aa13.05□□□□□ -0.32
ACTN1-210ENST00000553779 NFE2L2Q16236 605 aa13.05□□□□□ -0.32
ACTN1-210ENST00000553779 TMX4Q9H1E5 349 aaPredicted RBP13.05□□□□□ -0.32
ACTN1-210ENST00000553779 RGL2O15211 777 aa13.04□□□□□ -0.32
ACTN1-210ENST00000553779 GPTP24298 496 aa13.04□□□□□ -0.32
ACTN1-210ENST00000553779 HLFQ16534 295 aa13.04□□□□□ -0.32
ACTN1-210ENST00000553779 TNS4Q8IZW8 715 aa13.04□□□□□ -0.32
ACTN1-210ENST00000553779 JDP2Q8WYK2 163 aa13.04□□□□□ -0.32
ACTN1-210ENST00000553779 ZBTB3Q9H5J0 574 aa13.04□□□□□ -0.32
ACTN1-210ENST00000553779 TRPM7Q96QT4 1865 aa13.04□□□□□ -0.32
ACTN1-210ENST00000553779 LAMB2P55268 1798 aa13.03□□□□□ -0.32
ACTN1-210ENST00000553779 HSPA1AP0DMV8 641 aaKnown RBP13.03□□□□□ -0.32
ACTN1-210ENST00000553779 HSPA1BP0DMV9 641 aaKnown RBP13.03□□□□□ -0.32
ACTN1-210ENST00000553779 LDHDQ86WU2 507 aa13.03□□□□□ -0.32
ACTN1-210ENST00000553779 NUTM1Q86Y26 1132 aa13.03□□□□□ -0.32
ACTN1-210ENST00000553779 THUMPD2Q9BTF0 503 aaKnown RBP13.03□□□□□ -0.32
ACTN1-210ENST00000553779 MKRN1Q9UHC7 482 aaKnown RBP13.03□□□□□ -0.32
ACTN1-210ENST00000553779 TSPYL4Q9UJ04 414 aa13.03□□□□□ -0.32
ACTN1-210ENST00000553779 MAP3K15Q6ZN16 1313 aa13.03□□□□□ -0.32
ACTN1-210ENST00000553779 POTECB2RU33 542 aa13.02□□□□□ -0.33
ACTN1-210ENST00000553779 IARSP41252 1262 aaKnown RBP13.02□□□□□ -0.33
ACTN1-210ENST00000553779 OLFM4Q6UX06 510 aa13.02□□□□□ -0.33
ACTN1-210ENST00000553779 CREBZFQ9NS37 354 aa13.02□□□□□ -0.33
ACTN1-210ENST00000553779 HACL1Q9UJ83 578 aa13.02□□□□□ -0.33
ACTN1-210ENST00000553779 ZNF541Q9H0D2 1346 aa13.02□□□□□ -0.33
ACTN1-210ENST00000553779 ABCC12Q96J65 1359 aa13.02□□□□□ -0.33
ACTN1-210ENST00000553779 ERVV-1B6SEH8 477 aa13.01□□□□□ -0.33
ACTN1-210ENST00000553779 TCERG1O14776 1098 aaKnown RBP13.01□□□□□ -0.33
ACTN1-210ENST00000553779 LMOD1P29536 600 aaPredicted RBP13.01□□□□□ -0.33
ACTN1-210ENST00000553779 EIF6P56537 245 aaKnown RBP13.01□□□□□ -0.33
ACTN1-210ENST00000553779 LMOD3Q0VAK6 560 aa13.01□□□□□ -0.33
ACTN1-210ENST00000553779 COL13A1Q5TAT6 717 aaPredicted RBP13.01□□□□□ -0.33
ACTN1-210ENST00000553779 SYNE4Q8N205 404 aa13.01□□□□□ -0.33
ACTN1-210ENST00000553779 GJA3Q9Y6H8 435 aa13.01□□□□□ -0.33
ACTN1-210ENST00000553779 IBTKQ9P2D0 1353 aaPredicted RBP13□□□□□ -0.33
ACTN1-210ENST00000553779 RNF123Q5XPI4 1314 aa13□□□□□ -0.33
ACTN1-210ENST00000553779 POTEIP0CG38 1075 aa13□□□□□ -0.33
ACTN1-210ENST00000553779 POTEJP0CG39 1038 aa13□□□□□ -0.33
ACTN1-210ENST00000553779 EIF2S2P20042 333 aaKnown RBP13□□□□□ -0.33
ACTN1-210ENST00000553779 EIF4A1P60842 406 aaKnown RBP13□□□□□ -0.33
ACTN1-210ENST00000553779 TTLL7Q6ZT98 887 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 175.7 ms