RNA–Protein interactions for RNA: ENST00000553391.2

MTHFD1-203, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-203ENST00000553391 TTLL7Q6ZT98 887 aa11.54□□□□□ -0.56
MTHFD1-203ENST00000553391 BICC1Q9H694 974 aaKnown RBP11.54□□□□□ -0.56
MTHFD1-203ENST00000553391 IL1RAPL2Q9NP60 686 aa11.54□□□□□ -0.56
MTHFD1-203ENST00000553391 ASAP1Q9ULH1 1129 aa11.54□□□□□ -0.56
MTHFD1-203ENST00000553391 PARP4Q9UKK3 1724 aaKnown RBP11.54□□□□□ -0.56
MTHFD1-203ENST00000553391 USP42Q9H9J4 1324 aaKnown RBP11.54□□□□□ -0.56
MTHFD1-203ENST00000553391 COL22A1Q8NFW1 1626 aaPredicted RBP11.53□□□□□ -0.56
MTHFD1-203ENST00000553391 ROBO1Q9Y6N7 1651 aa11.53□□□□□ -0.56
MTHFD1-203ENST00000553391 RFX5P48382 616 aaPredicted RBP11.53□□□□□ -0.56
MTHFD1-203ENST00000553391 RABL6Q3YEC7 729 aaPredicted RBP11.53□□□□□ -0.56
MTHFD1-203ENST00000553391 NUTM1Q86Y26 1132 aa11.53□□□□□ -0.56
MTHFD1-203ENST00000553391 ERC1Q8IUD2 1116 aa11.53□□□□□ -0.56
MTHFD1-203ENST00000553391 BCL11AQ9H165 835 aa11.53□□□□□ -0.56
MTHFD1-203ENST00000553391 KCPQ6ZWJ8 1503 aa11.53□□□□□ -0.56
MTHFD1-203ENST00000553391 COL14A1Q05707 1796 aaKnown RBP11.53□□□□□ -0.56
MTHFD1-203ENST00000553391 SPATA31A1Q5TZJ5 1347 aa11.53□□□□□ -0.56
MTHFD1-203ENST00000553391 SASH1O94885 1247 aa11.52□□□□□ -0.57
MTHFD1-203ENST00000553391 ADAMTS2O95450 1211 aa11.52□□□□□ -0.57
MTHFD1-203ENST00000553391 TRIM28Q13263 835 aaKnown RBP11.52□□□□□ -0.57
MTHFD1-203ENST00000553391 G3BP1Q13283 466 aaKnown RBP eCLIP11.52□□□□□ -0.571e-6■□□□□ 10.9
MTHFD1-203ENST00000553391 CASC1Q6TDU7 716 aa11.52□□□□□ -0.57
MTHFD1-203ENST00000553391 DNAJC10Q8IXB1 793 aa11.52□□□□□ -0.57
MTHFD1-203ENST00000553391 PI4K2BQ8TCG2 481 aa11.52□□□□□ -0.57
MTHFD1-203ENST00000553391 ISCA1Q9BUE6 129 aa11.52□□□□□ -0.57
MTHFD1-203ENST00000553391 COPRSQ9NQ92 184 aa11.52□□□□□ -0.57
MTHFD1-203ENST00000553391 PA2G4Q9UQ80 394 aaKnown RBP11.52□□□□□ -0.57
MTHFD1-203ENST00000553391 A0A087WZG4 1122 aa11.51□□□□□ -0.57
MTHFD1-203ENST00000553391 ATP5J2-PTCD1G3V325 749 aa11.51□□□□□ -0.57
MTHFD1-203ENST00000553391 ERC2O15083 957 aa11.51□□□□□ -0.57
MTHFD1-203ENST00000553391 CHMLP26374 656 aa11.51□□□□□ -0.57
MTHFD1-203ENST00000553391 JARID2Q92833 1246 aaPredicted RBP11.51□□□□□ -0.57
MTHFD1-203ENST00000553391 SLC4A9Q96Q91 983 aa11.51□□□□□ -0.57
MTHFD1-203ENST00000553391 ANTXR1Q9H6X2 564 aa11.51□□□□□ -0.57
MTHFD1-203ENST00000553391 SPATA31A5Q5VU36 1347 aa11.51□□□□□ -0.57
MTHFD1-203ENST00000553391 SPATA31A7Q8IWB4 1347 aa11.51□□□□□ -0.57
MTHFD1-203ENST00000553391 GLI3P10071 1580 aa11.5□□□□□ -0.57
MTHFD1-203ENST00000553391 C5P01031 1676 aa11.5□□□□□ -0.57
MTHFD1-203ENST00000553391 STARD3NLO95772 234 aa11.5□□□□□ -0.57
MTHFD1-203ENST00000553391 FOXO4P98177 505 aa11.5□□□□□ -0.57
MTHFD1-203ENST00000553391 TCIRG1Q13488 830 aa11.5□□□□□ -0.57
MTHFD1-203ENST00000553391 TSHZ3Q63HK5 1081 aa11.5□□□□□ -0.57
MTHFD1-203ENST00000553391 BARGINQ6ZT62 677 aa11.5□□□□□ -0.57
MTHFD1-203ENST00000553391 UNC5CLQ8IV45 518 aa11.5□□□□□ -0.57
MTHFD1-203ENST00000553391 CLASRPQ8N2M8 674 aaKnown RBP11.5□□□□□ -0.57
MTHFD1-203ENST00000553391 CCDC191Q8NCU4 936 aa11.5□□□□□ -0.57
MTHFD1-203ENST00000553391 TTC41PQ6P2S7 1318 aa11.5□□□□□ -0.57
MTHFD1-203ENST00000553391 EPB41L2O43491 1005 aaKnown RBP11.49□□□□□ -0.57
MTHFD1-203ENST00000553391 CYP19A1P11511 503 aaPredicted RBP11.49□□□□□ -0.57
MTHFD1-203ENST00000553391 PRIM1P49642 420 aaKnown RBP11.49□□□□□ -0.57
MTHFD1-203ENST00000553391 PIP4K2BP78356 416 aa11.49□□□□□ -0.57
MTHFD1-203ENST00000553391 PTPN12Q05209 780 aaKnown RBP11.49□□□□□ -0.57
MTHFD1-203ENST00000553391 OS9Q13438 667 aaPredicted RBP11.49□□□□□ -0.57
MTHFD1-203ENST00000553391 ESYT1Q9BSJ8 1104 aa11.49□□□□□ -0.57
MTHFD1-203ENST00000553391 CWC25Q9NXE8 425 aaPredicted RBP11.49□□□□□ -0.57
MTHFD1-203ENST00000553391 BCL9O00512 1426 aa11.49□□□□□ -0.57
MTHFD1-203ENST00000553391 COL16A1Q07092 1604 aaPredicted RBP11.49□□□□□ -0.57
MTHFD1-203ENST00000553391 SHANK3Q9BYB0 1731 aa11.49□□□□□ -0.57
MTHFD1-203ENST00000553391 NUTM2BA6NNL0 878 aaPredicted RBP11.48□□□□□ -0.57
MTHFD1-203ENST00000553391 NUTM2EB1AL46 878 aaPredicted RBP11.48□□□□□ -0.57
MTHFD1-203ENST00000553391 REC8O95072 547 aa11.48□□□□□ -0.57
MTHFD1-203ENST00000553391 DDB1Q16531 1140 aa11.48□□□□□ -0.57
MTHFD1-203ENST00000553391 UBE3BQ7Z3V4 1068 aa11.48□□□□□ -0.57
MTHFD1-203ENST00000553391 NUTM2AQ8IVF1 878 aaPredicted RBP11.48□□□□□ -0.57
MTHFD1-203ENST00000553391 MARCH10Q8NA82 808 aaPredicted RBP11.48□□□□□ -0.57
MTHFD1-203ENST00000553391 RILPL2Q969X0 211 aa11.48□□□□□ -0.57
MTHFD1-203ENST00000553391 EAF2Q96CJ1 260 aaPredicted RBP11.48□□□□□ -0.57
MTHFD1-203ENST00000553391 IL17RAQ96F46 866 aa11.48□□□□□ -0.57
MTHFD1-203ENST00000553391 RBM42Q9BTD8 480 aaKnown RBP11.48□□□□□ -0.57
MTHFD1-203ENST00000553391 ECHDC1Q9NTX5 307 aa11.48□□□□□ -0.57
MTHFD1-203ENST00000553391 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.48□□□□□ -0.57
MTHFD1-203ENST00000553391 TRIM6-TRIM34B2RNG4 842 aa11.47□□□□□ -0.57
MTHFD1-203ENST00000553391 UBAP1LF5GYI3 381 aa11.47□□□□□ -0.57
MTHFD1-203ENST00000553391 GLRX3O76003 335 aaKnown RBP11.47□□□□□ -0.57
MTHFD1-203ENST00000553391 SLIT2O94813 1529 aa11.46□□□□□ -0.57
MTHFD1-203ENST00000553391 IFIT2P09913 472 aaKnown RBP11.46□□□□□ -0.57
MTHFD1-203ENST00000553391 RABEP1Q15276 862 aa11.46□□□□□ -0.57
MTHFD1-203ENST00000553391 NFKBIBQ15653 356 aa11.46□□□□□ -0.57
MTHFD1-203ENST00000553391 LMBR1LQ6UX01 489 aa11.46□□□□□ -0.57
MTHFD1-203ENST00000553391 HSCBQ8IWL3 235 aa11.46□□□□□ -0.57
MTHFD1-203ENST00000553391 KLHDC4Q8TBB5 520 aa11.46□□□□□ -0.57
MTHFD1-203ENST00000553391 ZBTB3Q9H5J0 574 aa11.46□□□□□ -0.57
MTHFD1-203ENST00000553391 UBR2Q8IWV8 1755 aa11.46□□□□□ -0.58
MTHFD1-203ENST00000553391 PAPPAQ13219 1627 aa11.46□□□□□ -0.58
MTHFD1-203ENST00000553391 PCCAP05165 728 aaPredicted RBP11.45□□□□□ -0.58
MTHFD1-203ENST00000553391 DDIT3P35638 169 aa11.45□□□□□ -0.58
MTHFD1-203ENST00000553391 NBR1Q14596 966 aa11.45□□□□□ -0.58
MTHFD1-203ENST00000553391 GIGYF2Q6Y7W6 1299 aaKnown RBP11.45□□□□□ -0.58
MTHFD1-203ENST00000553391 AACSQ86V21 672 aa11.45□□□□□ -0.58
MTHFD1-203ENST00000553391 CNTROBQ8N137 903 aa11.45□□□□□ -0.58
MTHFD1-203ENST00000553391 PLA2G12BQ9BX93 195 aa11.45□□□□□ -0.58
MTHFD1-203ENST00000553391 CCDC8Q9H0W5 538 aaPredicted RBP11.45□□□□□ -0.58
MTHFD1-203ENST00000553391 MAP3K15Q6ZN16 1313 aa11.44□□□□□ -0.58
MTHFD1-203ENST00000553391 ERVV-1B6SEH8 477 aa11.44□□□□□ -0.58
MTHFD1-203ENST00000553391 CSF1RP07333 972 aa11.44□□□□□ -0.58
MTHFD1-203ENST00000553391 IL6STP40189 918 aaPredicted RBP11.44□□□□□ -0.58
MTHFD1-203ENST00000553391 MYT1Q01538 1121 aa11.44□□□□□ -0.58
MTHFD1-203ENST00000553391 VPS72Q15906 364 aa11.44□□□□□ -0.58
MTHFD1-203ENST00000553391 FNBP4Q8N3X1 1017 aaPredicted RBP11.44□□□□□ -0.58
MTHFD1-203ENST00000553391 GPR108Q9NPR9 543 aa11.44□□□□□ -0.58
MTHFD1-203ENST00000553391 LRP6O75581 1613 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms