RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 LYPD4Q6UWN0 246 aa9.5□□□□□ -0.89
ATXN3-217ENST00000553287 ALDH16A1Q8IZ83 802 aa9.5□□□□□ -0.89
ATXN3-217ENST00000553287 RHPN1Q8TCX5 695 aa9.5□□□□□ -0.89
ATXN3-217ENST00000553287 NGLY1Q96IV0 654 aa9.5□□□□□ -0.89
ATXN3-217ENST00000553287 ZMIZ1Q9ULJ6 1067 aa9.5□□□□□ -0.89
ATXN3-217ENST00000553287 WEE1P30291 646 aa9.49□□□□□ -0.89
ATXN3-217ENST00000553287 TNP2Q05952 138 aa9.49□□□□□ -0.89
ATXN3-217ENST00000553287 SVOPQ8N4V2 548 aa9.49□□□□□ -0.89
ATXN3-217ENST00000553287 KLRG1Q96E93 195 aa9.49□□□□□ -0.89
ATXN3-217ENST00000553287 GPC6Q9Y625 555 aaPredicted RBP9.49□□□□□ -0.89
ATXN3-217ENST00000553287 DCDC2BA2VCK2 349 aa9.48□□□□□ -0.89
ATXN3-217ENST00000553287 KHNYNO15037 678 aaKnown RBP9.48□□□□□ -0.89
ATXN3-217ENST00000553287 CELA2BP08218 269 aaPredicted RBP9.48□□□□□ -0.89
ATXN3-217ENST00000553287 MAPTP10636 758 aaKnown RBP9.48□□□□□ -0.89
ATXN3-217ENST00000553287 BMP4P12644 408 aa9.48□□□□□ -0.89
ATXN3-217ENST00000553287 MAP2K3P46734 347 aa9.48□□□□□ -0.89
ATXN3-217ENST00000553287 STK32AQ8WU08 396 aa9.48□□□□□ -0.89
ATXN3-217ENST00000553287 C2CD2LO14523 706 aa9.47□□□□□ -0.89
ATXN3-217ENST00000553287 SAMD5Q5TGI4 173 aa9.47□□□□□ -0.89
ATXN3-217ENST00000553287 ACDQ96AP0 544 aa9.47□□□□□ -0.89
ATXN3-217ENST00000553287 PRIMPOLQ96LW4 560 aa9.47□□□□□ -0.89
ATXN3-217ENST00000553287 ANKIB1Q9P2G1 1089 aa9.47□□□□□ -0.89
ATXN3-217ENST00000553287 ACIN1Q9UKV3 1341 aaKnown RBP9.47□□□□□ -0.89
ATXN3-217ENST00000553287 FAM69CQ0P6D2 419 aa9.46□□□□□ -0.9
ATXN3-217ENST00000553287 SWI5Q1ZZU3 235 aa9.46□□□□□ -0.9
ATXN3-217ENST00000553287 SUPT5HO00267 1087 aaKnown RBP9.45□□□□□ -0.9
ATXN3-217ENST00000553287 ARHGEF15O94989 841 aa9.45□□□□□ -0.9
ATXN3-217ENST00000553287 FAM157BP0CG42 384 aa9.45□□□□□ -0.9
ATXN3-217ENST00000553287 MAP3K10Q02779 954 aa9.45□□□□□ -0.9
ATXN3-217ENST00000553287 ZNF280CQ8ND82 737 aa9.45□□□□□ -0.9
ATXN3-217ENST00000553287 VTI1AQ96AJ9 217 aa9.45□□□□□ -0.9
ATXN3-217ENST00000553287 SUSD3Q96L08 255 aa9.45□□□□□ -0.9
ATXN3-217ENST00000553287 HCN2Q9UL51 889 aa9.45□□□□□ -0.9
ATXN3-217ENST00000553287 ADAMTS8Q9UP79 889 aa9.45□□□□□ -0.9
ATXN3-217ENST00000553287 PRMT3O60678 531 aa9.44□□□□□ -0.9
ATXN3-217ENST00000553287 BCRP11274 1271 aa9.44□□□□□ -0.9
ATXN3-217ENST00000553287 CD33P20138 364 aa9.44□□□□□ -0.9
ATXN3-217ENST00000553287 TMEM164Q5U3C3 297 aa9.44□□□□□ -0.9
ATXN3-217ENST00000553287 HSH2DQ96JZ2 352 aa9.44□□□□□ -0.9
ATXN3-217ENST00000553287 OXCT2Q9BYC2 517 aaPredicted RBP9.44□□□□□ -0.9
ATXN3-217ENST00000553287 MARK1Q9P0L2 795 aa9.44□□□□□ -0.9
ATXN3-217ENST00000553287 FOXO3O43524 673 aa9.43□□□□□ -0.9
ATXN3-217ENST00000553287 STRN4Q9NRL3 753 aa9.43□□□□□ -0.9
ATXN3-217ENST00000553287 TIMELESSQ9UNS1 1208 aa9.43□□□□□ -0.9
ATXN3-217ENST00000553287 EFSO43281 561 aa9.42□□□□□ -0.9
ATXN3-217ENST00000553287 LAMC2Q13753 1193 aa9.42□□□□□ -0.9
ATXN3-217ENST00000553287 RTN1Q16799 776 aa9.42□□□□□ -0.9
ATXN3-217ENST00000553287 FAM182BQ5T319 152 aa9.42□□□□□ -0.9
ATXN3-217ENST00000553287 CEP63Q96MT8 703 aa9.42□□□□□ -0.9
ATXN3-217ENST00000553287 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.42□□□□□ -0.9
ATXN3-217ENST00000553287 ENAMQ9NRM1 1142 aa9.42□□□□□ -0.9
ATXN3-217ENST00000553287 PPP1R15AO75807 674 aaPredicted RBP9.41□□□□□ -0.9
ATXN3-217ENST00000553287 SFSWAPQ12872 951 aaKnown RBP9.41□□□□□ -0.9
ATXN3-217ENST00000553287 HIF1AQ16665 826 aa9.41□□□□□ -0.9
ATXN3-217ENST00000553287 PRR12Q9ULL5 1215 aa9.41□□□□□ -0.9
ATXN3-217ENST00000553287 OIP5O43482 229 aa9.4□□□□□ -0.9
ATXN3-217ENST00000553287 OCLNQ16625 522 aa9.4□□□□□ -0.9
ATXN3-217ENST00000553287 GALNT6Q8NCL4 622 aa9.4□□□□□ -0.9
ATXN3-217ENST00000553287 GDF2Q9UK05 429 aaPredicted RBP9.4□□□□□ -0.9
ATXN3-217ENST00000553287 DNMT3AQ9Y6K1 912 aaPredicted RBP9.4□□□□□ -0.9
ATXN3-217ENST00000553287 MARSP56192 900 aaKnown RBP9.39□□□□□ -0.91
ATXN3-217ENST00000553287 FKBP5Q13451 457 aaPredicted RBP9.39□□□□□ -0.91
ATXN3-217ENST00000553287 GOLGA6L1Q8N7Z2 621 aa9.39□□□□□ -0.91
ATXN3-217ENST00000553287 NEDD1Q8NHV4 660 aa9.39□□□□□ -0.91
ATXN3-217ENST00000553287 BRD7Q9NPI1 651 aa9.39□□□□□ -0.91
ATXN3-217ENST00000553287 LRRC4BQ9NT99 713 aa9.39□□□□□ -0.91
ATXN3-217ENST00000553287 KLK14Q9P0G3 267 aa9.39□□□□□ -0.91
ATXN3-217ENST00000553287 GGA1Q9UJY5 639 aa9.39□□□□□ -0.91
ATXN3-217ENST00000553287 ARAFP10398 606 aa9.38□□□□□ -0.91
ATXN3-217ENST00000553287 GRIN2CQ14957 1233 aa9.38□□□□□ -0.91
ATXN3-217ENST00000553287 C1orf229Q6ZS94 237 aaPredicted RBP9.38□□□□□ -0.91
ATXN3-217ENST00000553287 BTLAQ7Z6A9 289 aa9.38□□□□□ -0.91
ATXN3-217ENST00000553287 CLP1Q92989 425 aaKnown RBP9.38□□□□□ -0.91
ATXN3-217ENST00000553287 QTRT2Q9H974 415 aaKnown RBP9.38□□□□□ -0.91
ATXN3-217ENST00000553287 BCS1LQ9Y276 419 aa9.38□□□□□ -0.91
ATXN3-217ENST00000553287 NEURL1BA8MQ27 555 aa9.37□□□□□ -0.91
ATXN3-217ENST00000553287 DGKZQ13574 1117 aa9.37□□□□□ -0.91
ATXN3-217ENST00000553287 C11orf91Q3C1V1 193 aa9.37□□□□□ -0.91
ATXN3-217ENST00000553287 EDARADDQ8WWZ3 215 aa9.37□□□□□ -0.91
ATXN3-217ENST00000553287 ARID3AQ99856 593 aa9.37□□□□□ -0.91
ATXN3-217ENST00000553287 KCNH4Q9UQ05 1017 aa9.37□□□□□ -0.91
ATXN3-217ENST00000553287 PCBP4P57723 403 aaKnown RBP9.36□□□□□ -0.91
ATXN3-217ENST00000553287 TYRO3Q06418 890 aa9.36□□□□□ -0.91
ATXN3-217ENST00000553287 CXXC1Q9P0U4 656 aaPredicted RBP9.36□□□□□ -0.91
ATXN3-217ENST00000553287 KLF15Q9UIH9 416 aa9.36□□□□□ -0.91
ATXN3-217ENST00000553287 TGFBR3LH3BV60 316 aa9.35□□□□□ -0.91
ATXN3-217ENST00000553287 ADH6P28332 368 aa9.35□□□□□ -0.91
ATXN3-217ENST00000553287 IER5Q5VY09 327 aa9.35□□□□□ -0.91
ATXN3-217ENST00000553287 MYO19Q96H55 970 aa9.35□□□□□ -0.91
ATXN3-217ENST00000553287 SLC30A3Q99726 388 aa9.35□□□□□ -0.91
ATXN3-217ENST00000553287 AVENQ9NQS1 362 aaPredicted RBP9.35□□□□□ -0.91
ATXN3-217ENST00000553287 SLAIN2Q9P270 581 aa9.35□□□□□ -0.91
ATXN3-217ENST00000553287 DMGDHQ9UI17 866 aaKnown RBP9.35□□□□□ -0.91
ATXN3-217ENST00000553287 LRFN2Q9ULH4 789 aa9.35□□□□□ -0.91
ATXN3-217ENST00000553287 SHISA8B8ZZ34 492 aa9.34□□□□□ -0.91
ATXN3-217ENST00000553287 KCNQ4P56696 695 aa9.34□□□□□ -0.91
ATXN3-217ENST00000553287 COX20Q5RI15 118 aa9.34□□□□□ -0.91
ATXN3-217ENST00000553287 ZNF468Q5VIY5 522 aaPredicted RBP9.34□□□□□ -0.91
ATXN3-217ENST00000553287 CAPN12Q6ZSI9 719 aa9.34□□□□□ -0.91
ATXN3-217ENST00000553287 MKNK1Q9BUB5 465 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms