RNA–Protein interactions for RNA: ENST00000553217.5

TMEM106C-221, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-221ENST00000553217 RAPGEF4Q8WZA2 1011 aa6.83□□□□□ -1.32
TMEM106C-221ENST00000553217 CFAP53Q96M91 514 aa6.83□□□□□ -1.32
TMEM106C-221ENST00000553217 DDX49Q9Y6V7 483 aaKnown RBP6.83□□□□□ -1.32
TMEM106C-221ENST00000553217 RTL1A6NKG5 1358 aa6.82□□□□□ -1.32
TMEM106C-221ENST00000553217 FLT4P35916 1363 aa6.82□□□□□ -1.32
TMEM106C-221ENST00000553217 IL16Q14005 1332 aa6.82□□□□□ -1.32
TMEM106C-221ENST00000553217 K7ELQ4 463 aaPredicted RBP6.82□□□□□ -1.32
TMEM106C-221ENST00000553217 CAVIN2O95810 425 aa6.82□□□□□ -1.32
TMEM106C-221ENST00000553217 POLD1P28340 1107 aa6.82□□□□□ -1.32
TMEM106C-221ENST00000553217 DDIT3P35638 169 aa6.82□□□□□ -1.32
TMEM106C-221ENST00000553217 RBM10P98175 930 aaKnown RBP6.82□□□□□ -1.32
TMEM106C-221ENST00000553217 PDE4CQ08493 712 aa6.82□□□□□ -1.32
TMEM106C-221ENST00000553217 FTSJ3Q8IY81 847 aaKnown RBP6.82□□□□□ -1.32
TMEM106C-221ENST00000553217 CALCOCO1Q9P1Z2 691 aa6.82□□□□□ -1.32
TMEM106C-221ENST00000553217 USP25Q9UHP3 1055 aa6.82□□□□□ -1.32
TMEM106C-221ENST00000553217 PRDM4Q9UKN5 801 aa6.82□□□□□ -1.32
TMEM106C-221ENST00000553217 ATP6V1DQ9Y5K8 247 aa6.82□□□□□ -1.32
TMEM106C-221ENST00000553217 KIF24Q5T7B8 1368 aa6.82□□□□□ -1.32
TMEM106C-221ENST00000553217 C4BP0C0L5 1744 aa6.81□□□□□ -1.32
TMEM106C-221ENST00000553217 COL24A1Q17RW2 1714 aa6.81□□□□□ -1.32
TMEM106C-221ENST00000553217 PKD1L3Q7Z443 1732 aa6.81□□□□□ -1.32
TMEM106C-221ENST00000553217 SENP3-EIF4A1A0A087X0R7 540 aa6.81□□□□□ -1.32
TMEM106C-221ENST00000553217 KIF2AO00139 706 aaPredicted RBP6.81□□□□□ -1.32
TMEM106C-221ENST00000553217 MYCNP04198 464 aaPredicted RBP6.81□□□□□ -1.32
TMEM106C-221ENST00000553217 SLC27A3Q5K4L6 730 aa6.81□□□□□ -1.32
TMEM106C-221ENST00000553217 ZKSCAN2Q63HK3 967 aa6.81□□□□□ -1.32
TMEM106C-221ENST00000553217 LINC00116Q8NCU8 138 aa6.81□□□□□ -1.32
TMEM106C-221ENST00000553217 ZNF526Q8TF50 670 aaPredicted RBP6.81□□□□□ -1.32
TMEM106C-221ENST00000553217 PIGBQ92521 554 aa6.81□□□□□ -1.32
TMEM106C-221ENST00000553217 EYA1Q99502 592 aa6.81□□□□□ -1.32
TMEM106C-221ENST00000553217 PCDH11XQ9BZA7 1347 aa6.8□□□□□ -1.32
TMEM106C-221ENST00000553217 PCDH11YQ9BZA8 1340 aa6.8□□□□□ -1.32
TMEM106C-221ENST00000553217 UTRNP46939 3433 aa6.8□□□□□ -1.32
TMEM106C-221ENST00000553217 HTATSF1O43719 755 aaKnown RBP6.8□□□□□ -1.32
TMEM106C-221ENST00000553217 BRPF1P55201 1214 aaPredicted RBP6.8□□□□□ -1.32
TMEM106C-221ENST00000553217 ITPK1Q13572 414 aa6.8□□□□□ -1.32
TMEM106C-221ENST00000553217 MVPQ14764 893 aaKnown RBP6.8□□□□□ -1.32
TMEM106C-221ENST00000553217 UBR3Q6ZT12 1888 aa6.8□□□□□ -1.32
TMEM106C-221ENST00000553217 FAM13BQ9NYF5 915 aa6.8□□□□□ -1.32
TMEM106C-221ENST00000553217 POLKQ9UBT6 870 aa6.8□□□□□ -1.32
TMEM106C-221ENST00000553217 ASAP1Q9ULH1 1129 aa6.8□□□□□ -1.32
TMEM106C-221ENST00000553217 ANKRD26Q9UPS8 1709 aa6.79□□□□□ -1.32
TMEM106C-221ENST00000553217 A0A0U1RQG5 324 aaPredicted RBP6.79□□□□□ -1.32
TMEM106C-221ENST00000553217 PTMAP06454 111 aaKnown RBP6.79□□□□□ -1.32
TMEM106C-221ENST00000553217 PPP2R1AP30153 589 aa6.79□□□□□ -1.32
TMEM106C-221ENST00000553217 SLC4A3P48751 1232 aa6.79□□□□□ -1.32
TMEM106C-221ENST00000553217 EIF4A2Q14240 407 aaKnown RBP6.79□□□□□ -1.32
TMEM106C-221ENST00000553217 ALDH1L2Q3SY69 923 aa6.79□□□□□ -1.32
TMEM106C-221ENST00000553217 DNTTIP2Q5QJE6 756 aaKnown RBP6.79□□□□□ -1.32
TMEM106C-221ENST00000553217 LRSAM1Q6UWE0 723 aa6.79□□□□□ -1.32
TMEM106C-221ENST00000553217 AEBP1Q8IUX7 1158 aa6.79□□□□□ -1.32
TMEM106C-221ENST00000553217 IPO4Q8TEX9 1081 aaKnown RBP6.79□□□□□ -1.32
TMEM106C-221ENST00000553217 TNPO1Q92973 898 aaKnown RBP6.79□□□□□ -1.32
TMEM106C-221ENST00000553217 AK7Q96M32 723 aa6.79□□□□□ -1.32
TMEM106C-221ENST00000553217 PANK3Q9H999 370 aa6.79□□□□□ -1.32
TMEM106C-221ENST00000553217 CGNQ9P2M7 1197 aaKnown RBP6.79□□□□□ -1.32
TMEM106C-221ENST00000553217 ADAMTS8Q9UP79 889 aa6.79□□□□□ -1.32
TMEM106C-221ENST00000553217 PAXBP1Q9Y5B6 917 aa6.79□□□□□ -1.32
TMEM106C-221ENST00000553217 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.78□□□□□ -1.32
TMEM106C-221ENST00000553217 NEMFO60524 1076 aa6.78□□□□□ -1.32
TMEM106C-221ENST00000553217 REC8O95072 547 aa6.78□□□□□ -1.32
TMEM106C-221ENST00000553217 ATXN8OSP0DMR3 200 aa6.78□□□□□ -1.32
TMEM106C-221ENST00000553217 SLC16A10Q8TF71 515 aa6.78□□□□□ -1.32
TMEM106C-221ENST00000553217 PIBF1Q8WXW3 757 aa6.78□□□□□ -1.32
TMEM106C-221ENST00000553217 ARHGAP45Q92619 1136 aa6.78□□□□□ -1.32
TMEM106C-221ENST00000553217 RUNDC1Q96C34 613 aa6.78□□□□□ -1.32
TMEM106C-221ENST00000553217 CDCA7LQ96GN5 454 aa6.78□□□□□ -1.32
TMEM106C-221ENST00000553217 SLC4A9Q96Q91 983 aa6.78□□□□□ -1.32
TMEM106C-221ENST00000553217 OGFRQ9NZT2 677 aa6.78□□□□□ -1.32
TMEM106C-221ENST00000553217 MAP3K5Q99683 1374 aa6.78□□□□□ -1.32
TMEM106C-221ENST00000553217 N4BP2Q86UW6 1770 aaPredicted RBP6.77□□□□□ -1.33
TMEM106C-221ENST00000553217 NCAPD2Q15021 1401 aa6.77□□□□□ -1.33
TMEM106C-221ENST00000553217 ATP10DQ9P241 1426 aa6.77□□□□□ -1.33
TMEM106C-221ENST00000553217 LOC102724428A0A0B4J2F2 783 aa6.77□□□□□ -1.33
TMEM106C-221ENST00000553217 GNPATO15228 680 aa6.77□□□□□ -1.33
TMEM106C-221ENST00000553217 NRDCO43847 1150 aa6.77□□□□□ -1.33
TMEM106C-221ENST00000553217 PLIN1O60240 522 aa6.77□□□□□ -1.33
TMEM106C-221ENST00000553217 PHKG2P15735 406 aa6.77□□□□□ -1.33
TMEM106C-221ENST00000553217 MCCP23508 829 aa6.77□□□□□ -1.33
TMEM106C-221ENST00000553217 ATP6V1AP38606 617 aa6.77□□□□□ -1.33
TMEM106C-221ENST00000553217 SIK1P57059 783 aa6.77□□□□□ -1.33
TMEM106C-221ENST00000553217 C1QTNF8P60827 252 aa6.77□□□□□ -1.33
TMEM106C-221ENST00000553217 TUBB4BP68371 445 aa6.77□□□□□ -1.33
TMEM106C-221ENST00000553217 AXDND1Q5T1B0 1012 aaPredicted RBP6.77□□□□□ -1.33
TMEM106C-221ENST00000553217 DZIP1LQ8IYY4 767 aaKnown RBP6.77□□□□□ -1.33
TMEM106C-221ENST00000553217 INTS4Q96HW7 963 aaKnown RBP6.77□□□□□ -1.33
TMEM106C-221ENST00000553217 ARID3AQ99856 593 aa6.77□□□□□ -1.33
TMEM106C-221ENST00000553217 RBM42Q9BTD8 480 aaKnown RBP6.77□□□□□ -1.33
TMEM106C-221ENST00000553217 R3HCC1Q9Y3T6 440 aaKnown RBP6.77□□□□□ -1.33
TMEM106C-221ENST00000553217 IGSF1Q8N6C5 1336 aa6.76□□□□□ -1.33
TMEM106C-221ENST00000553217 KDM6AO15550 1401 aaPredicted RBP6.76□□□□□ -1.33
TMEM106C-221ENST00000553217 GIGYF1O75420 1035 aaPredicted RBP6.76□□□□□ -1.33
TMEM106C-221ENST00000553217 RARSP54136 660 aaKnown RBP6.76□□□□□ -1.33
TMEM106C-221ENST00000553217 GPS2Q13227 327 aa6.76□□□□□ -1.33
TMEM106C-221ENST00000553217 TEX35Q5T0J7 233 aa6.76□□□□□ -1.33
TMEM106C-221ENST00000553217 GOLGA6L1Q8N7Z2 621 aa6.76□□□□□ -1.33
TMEM106C-221ENST00000553217 ATG3Q9NT62 314 aa6.76□□□□□ -1.33
TMEM106C-221ENST00000553217 TMOD3Q9NYL9 352 aa6.76□□□□□ -1.33
TMEM106C-221ENST00000553217 CWC15Q9P013 229 aaKnown RBP6.76□□□□□ -1.33
TMEM106C-221ENST00000553217 PDZRN3Q9UPQ7 1066 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms