RNA–Protein interactions for RNA: ENST00000552599.5

CNOT2-240, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 2,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-240ENST00000552599 SMC4Q9NTJ3 1288 aa9.26□□□□□ -0.93
CNOT2-240ENST00000552599 RFX1P22670 979 aa9.26□□□□□ -0.93
CNOT2-240ENST00000552599 TIE1P35590 1138 aa9.26□□□□□ -0.93
CNOT2-240ENST00000552599 ZC3H6P61129 1189 aaKnown RBP9.26□□□□□ -0.93
CNOT2-240ENST00000552599 LMOD3Q0VAK6 560 aa9.26□□□□□ -0.93
CNOT2-240ENST00000552599 SMC5Q8IY18 1101 aa9.26□□□□□ -0.93
CNOT2-240ENST00000552599 DDX17Q92841 729 aaKnown RBP9.26□□□□□ -0.93
CNOT2-240ENST00000552599 MBIPQ9NS73 344 aa9.26□□□□□ -0.93
CNOT2-240ENST00000552599 IFT57Q9NWB7 429 aa9.26□□□□□ -0.93
CNOT2-240ENST00000552599 RBM19Q9Y4C8 960 aaKnown RBP9.26□□□□□ -0.93
CNOT2-240ENST00000552599 KIF24Q5T7B8 1368 aa9.25□□□□□ -0.93
CNOT2-240ENST00000552599 KIF1AQ12756 1690 aa9.25□□□□□ -0.93
CNOT2-240ENST00000552599 C19orf67A6NJJ6 358 aa9.25□□□□□ -0.93
CNOT2-240ENST00000552599 ZNF853P0CG23 659 aa9.25□□□□□ -0.93
CNOT2-240ENST00000552599 ATF3P18847 181 aa9.25□□□□□ -0.93
CNOT2-240ENST00000552599 MCM10Q7L590 875 aa9.25□□□□□ -0.93
CNOT2-240ENST00000552599 KDM2BQ8NHM5 1336 aa9.25□□□□□ -0.93
CNOT2-240ENST00000552599 XIRP1Q702N8 1843 aaKnown RBP9.25□□□□□ -0.93
CNOT2-240ENST00000552599 GNAI1P63096 354 aa9.24□□□□□ -0.93
CNOT2-240ENST00000552599 CALD1Q05682 793 aaKnown RBP9.24□□□□□ -0.93
CNOT2-240ENST00000552599 KRT28Q7Z3Y7 464 aa9.24□□□□□ -0.93
CNOT2-240ENST00000552599 USHBP1Q8N6Y0 703 aa9.24□□□□□ -0.93
CNOT2-240ENST00000552599 TSPYL6Q8N831 410 aa9.24□□□□□ -0.93
CNOT2-240ENST00000552599 RTL1A6NKG5 1358 aa9.24□□□□□ -0.93
CNOT2-240ENST00000552599 APLP1P51693 650 aa9.24□□□□□ -0.93
CNOT2-240ENST00000552599 MTHFSDQ2M296 383 aaKnown RBP9.24□□□□□ -0.93
CNOT2-240ENST00000552599 DCCP43146 1447 aa9.24□□□□□ -0.93
CNOT2-240ENST00000552599 ELL2O00472 640 aaPredicted RBP9.23□□□□□ -0.93
CNOT2-240ENST00000552599 MICALL2Q8IY33 904 aa9.23□□□□□ -0.93
CNOT2-240ENST00000552599 IP6K1Q92551 441 aa9.23□□□□□ -0.93
CNOT2-240ENST00000552599 SLIT3O75094 1523 aa9.23□□□□□ -0.93
CNOT2-240ENST00000552599 CLGNO14967 610 aa9.23□□□□□ -0.93
CNOT2-240ENST00000552599 GALR2O43603 387 aaPredicted RBP9.23□□□□□ -0.93
CNOT2-240ENST00000552599 TRIM27P14373 513 aa9.23□□□□□ -0.93
CNOT2-240ENST00000552599 GTF2E1P29083 439 aaPredicted RBP9.23□□□□□ -0.93
CNOT2-240ENST00000552599 PDIA6Q15084 440 aa9.23□□□□□ -0.93
CNOT2-240ENST00000552599 NOM1Q5C9Z4 860 aaKnown RBP9.23□□□□□ -0.93
CNOT2-240ENST00000552599 ZKSCAN2Q63HK3 967 aa9.23□□□□□ -0.93
CNOT2-240ENST00000552599 MAMSTRQ6ZN01 415 aa9.23□□□□□ -0.93
CNOT2-240ENST00000552599 PARP9Q8IXQ6 854 aa9.23□□□□□ -0.93
CNOT2-240ENST00000552599 LARGE2Q8N3Y3 721 aa9.23□□□□□ -0.93
CNOT2-240ENST00000552599 METTL14Q9HCE5 456 aaKnown RBP9.23□□□□□ -0.93
CNOT2-240ENST00000552599 RGPD2P0DJD1 1756 aa9.22□□□□□ -0.93
CNOT2-240ENST00000552599 ALS2Q96Q42 1657 aa9.22□□□□□ -0.93
CNOT2-240ENST00000552599 GCP02774 474 aa9.22□□□□□ -0.93
CNOT2-240ENST00000552599 RTL5Q5HYW3 569 aaPredicted RBP9.22□□□□□ -0.93
CNOT2-240ENST00000552599 CLEC4GQ6UXB4 293 aa9.22□□□□□ -0.93
CNOT2-240ENST00000552599 C8orf58Q8NAV2 365 aa9.22□□□□□ -0.93
CNOT2-240ENST00000552599 KCNH5Q8NCM2 988 aa9.22□□□□□ -0.93
CNOT2-240ENST00000552599 ZNF622Q969S3 477 aaKnown RBP eCLIP9.22□□□□□ -0.934e-6■□□□□ 8.8
CNOT2-240ENST00000552599 NOB1Q9ULX3 412 aaKnown RBP9.22□□□□□ -0.93
CNOT2-240ENST00000552599 FAN1Q9Y2M0 1017 aa9.22□□□□□ -0.93
CNOT2-240ENST00000552599 USP19O94966 1318 aa9.22□□□□□ -0.93
CNOT2-240ENST00000552599 ZNF335Q9H4Z2 1342 aaPredicted RBP9.22□□□□□ -0.93
CNOT2-240ENST00000552599 TCERG1O14776 1098 aaKnown RBP9.22□□□□□ -0.93
CNOT2-240ENST00000552599 VAMP4O75379 141 aa9.22□□□□□ -0.93
CNOT2-240ENST00000552599 TMX4Q9H1E5 349 aaPredicted RBP9.22□□□□□ -0.93
CNOT2-240ENST00000552599 NCOA3Q9Y6Q9 1424 aa9.22□□□□□ -0.93
CNOT2-240ENST00000552599 PHRF1Q9P1Y6 1649 aaKnown RBP9.22□□□□□ -0.93
CNOT2-240ENST00000552599 MSH6P52701 1360 aa9.21□□□□□ -0.93
CNOT2-240ENST00000552599 CRB1P82279 1406 aa9.21□□□□□ -0.93
CNOT2-240ENST00000552599 SSFA2P28290 1259 aa9.21□□□□□ -0.93
CNOT2-240ENST00000552599 POLD1P28340 1107 aa9.21□□□□□ -0.93
CNOT2-240ENST00000552599 KRT24Q2M2I5 525 aa9.21□□□□□ -0.93
CNOT2-240ENST00000552599 NBPF6Q5VWK0 638 aa9.21□□□□□ -0.93
CNOT2-240ENST00000552599 ARHGEF25Q86VW2 580 aa9.21□□□□□ -0.93
CNOT2-240ENST00000552599 GIPC2Q8TF65 315 aa9.21□□□□□ -0.93
CNOT2-240ENST00000552599 NBPF4Q96M43 638 aa9.21□□□□□ -0.93
CNOT2-240ENST00000552599 MED1Q15648 1581 aaPredicted RBP9.21□□□□□ -0.94
CNOT2-240ENST00000552599 CENPQQ7L2Z9 268 aaPredicted RBP9.21□□□□□ -0.94
CNOT2-240ENST00000552599 DZIP1LQ8IYY4 767 aaKnown RBP9.21□□□□□ -0.94
CNOT2-240ENST00000552599 PDCD7Q8N8D1 485 aaKnown RBP9.21□□□□□ -0.94
CNOT2-240ENST00000552599 LRRC59Q96AG4 307 aaKnown RBP9.21□□□□□ -0.94
CNOT2-240ENST00000552599 CALR3Q96L12 384 aaKnown RBP9.21□□□□□ -0.94
CNOT2-240ENST00000552599 KAT6BQ8WYB5 2073 aa9.2□□□□□ -0.94
CNOT2-240ENST00000552599 MVPQ14764 893 aaKnown RBP9.2□□□□□ -0.94
CNOT2-240ENST00000552599 TWISTNBQ3B726 338 aaPredicted RBP9.2□□□□□ -0.94
CNOT2-240ENST00000552599 ALDH1L2Q3SY69 923 aa9.2□□□□□ -0.94
CNOT2-240ENST00000552599 ATF7IPQ6VMQ6 1270 aa9.2□□□□□ -0.94
CNOT2-240ENST00000552599 MIS18AQ9NYP9 233 aa9.2□□□□□ -0.94
CNOT2-240ENST00000552599 KIF16BQ96L93 1317 aa9.2□□□□□ -0.94
CNOT2-240ENST00000552599 hCG_2014768A0A024R1R8 64 aa9.2□□□□□ -0.94
CNOT2-240ENST00000552599 CHL1O00533 1208 aa9.2□□□□□ -0.94
CNOT2-240ENST00000552599 IGHDP01880 384 aa9.2□□□□□ -0.94
CNOT2-240ENST00000552599 ARID4AP29374 1257 aaPredicted RBP9.2□□□□□ -0.94
CNOT2-240ENST00000552599 CCDC181Q5TID7 509 aa9.2□□□□□ -0.94
CNOT2-240ENST00000552599 DNAJC14Q6Y2X3 702 aaPredicted RBP9.2□□□□□ -0.94
CNOT2-240ENST00000552599 ARMCX6Q7L4S7 300 aa9.2□□□□□ -0.94
CNOT2-240ENST00000552599 GAS2L2Q8NHY3 880 aa9.2□□□□□ -0.94
CNOT2-240ENST00000552599 MAF1Q9H063 256 aa9.2□□□□□ -0.94
CNOT2-240ENST00000552599 CHPF2Q9P2E5 772 aa9.2□□□□□ -0.94
CNOT2-240ENST00000552599 GPR37O15354 613 aa9.19□□□□□ -0.94
CNOT2-240ENST00000552599 EPB41L2O43491 1005 aaKnown RBP9.19□□□□□ -0.94
CNOT2-240ENST00000552599 RHBDL3P58872 404 aa9.19□□□□□ -0.94
CNOT2-240ENST00000552599 FOXK1P85037 733 aa9.19□□□□□ -0.94
CNOT2-240ENST00000552599 MRPL50Q8N5N7 158 aaKnown RBP9.19□□□□□ -0.94
CNOT2-240ENST00000552599 AXIN2Q9Y2T1 843 aa9.19□□□□□ -0.94
CNOT2-240ENST00000552599 PCDHB15Q9Y5E8 787 aa9.19□□□□□ -0.94
CNOT2-240ENST00000552599 RGPD5Q99666 1765 aa9.19□□□□□ -0.94
CNOT2-240ENST00000552599 TMEM57Q8N5G2 664 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms