RNA–Protein interactions for RNA: ENST00000552555.1

DDX23-215, Transcript of DEAD-box helicase 23, humanhuman

TSL 4

Gene DDX23, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-215ENST00000552555 SRGAP3O43295 1099 aa12.74□□□□□ -0.37
DDX23-215ENST00000552555 PDE1AP54750 535 aa12.74□□□□□ -0.37
DDX23-215ENST00000552555 CASP7P55210 303 aa12.74□□□□□ -0.37
DDX23-215ENST00000552555 UPF2Q9HAU5 1272 aaKnown RBP12.74□□□□□ -0.37
DDX23-215ENST00000552555 ASAP1Q9ULH1 1129 aa12.74□□□□□ -0.37
DDX23-215ENST00000552555 EXOC6BQ9Y2D4 811 aa12.74□□□□□ -0.37
DDX23-215ENST00000552555 USP42Q9H9J4 1324 aaKnown RBP12.73□□□□□ -0.37
DDX23-215ENST00000552555 SMARCA5O60264 1052 aaPredicted RBP12.73□□□□□ -0.37
DDX23-215ENST00000552555 TRIM28Q13263 835 aaKnown RBP12.73□□□□□ -0.37
DDX23-215ENST00000552555 DDB1Q16531 1140 aa12.73□□□□□ -0.37
DDX23-215ENST00000552555 RABL6Q3YEC7 729 aaPredicted RBP12.73□□□□□ -0.37
DDX23-215ENST00000552555 NPM2Q86SE8 214 aaKnown RBP12.73□□□□□ -0.37
DDX23-215ENST00000552555 OTUD7AQ8TE49 926 aaPredicted RBP12.73□□□□□ -0.37
DDX23-215ENST00000552555 KIF1BPQ96EK5 621 aa12.73□□□□□ -0.37
DDX23-215ENST00000552555 SUCLG2Q96I99 432 aa12.73□□□□□ -0.37
DDX23-215ENST00000552555 MYD88Q99836 296 aa12.73□□□□□ -0.37
DDX23-215ENST00000552555 H7C1W4 665 aa12.72□□□□□ -0.37
DDX23-215ENST00000552555 PTCD1O75127 700 aaKnown RBP12.72□□□□□ -0.37
DDX23-215ENST00000552555 CDC45O75419 566 aa12.72□□□□□ -0.37
DDX23-215ENST00000552555 STARD3NLO95772 234 aa12.72□□□□□ -0.37
DDX23-215ENST00000552555 A1BGP04217 495 aa12.72□□□□□ -0.37
DDX23-215ENST00000552555 RBM25P49756 843 aaKnown RBP12.72□□□□□ -0.37
DDX23-215ENST00000552555 MARCH10Q8NA82 808 aaPredicted RBP12.72□□□□□ -0.37
DDX23-215ENST00000552555 RHPN1Q8TCX5 695 aa12.72□□□□□ -0.37
DDX23-215ENST00000552555 CICQ96RK0 1608 aaPredicted RBP12.72□□□□□ -0.37
DDX23-215ENST00000552555 NUTM2BA6NNL0 878 aaPredicted RBP12.71□□□□□ -0.37
DDX23-215ENST00000552555 NUTM2EB1AL46 878 aaPredicted RBP12.71□□□□□ -0.37
DDX23-215ENST00000552555 SURF6O75683 361 aaKnown RBP12.71□□□□□ -0.37
DDX23-215ENST00000552555 TBC1D9Q6ZT07 1266 aa12.71□□□□□ -0.37
DDX23-215ENST00000552555 TTLL7Q6ZT98 887 aa12.71□□□□□ -0.37
DDX23-215ENST00000552555 ERC1Q8IUD2 1116 aa12.71□□□□□ -0.37
DDX23-215ENST00000552555 NUTM2AQ8IVF1 878 aaPredicted RBP12.71□□□□□ -0.37
DDX23-215ENST00000552555 DNAJC10Q8IXB1 793 aa12.71□□□□□ -0.37
DDX23-215ENST00000552555 SLC4A9Q96Q91 983 aa12.71□□□□□ -0.37
DDX23-215ENST00000552555 ISCA1Q9BUE6 129 aa12.71□□□□□ -0.37
DDX23-215ENST00000552555 ITGB4P16144 1822 aa12.7□□□□□ -0.38
DDX23-215ENST00000552555 CYP19A1P11511 503 aaPredicted RBP12.7□□□□□ -0.38
DDX23-215ENST00000552555 SDSP20132 328 aa12.7□□□□□ -0.38
DDX23-215ENST00000552555 MX1P20591 662 aa12.7□□□□□ -0.38
DDX23-215ENST00000552555 CCDC191Q8NCU4 936 aa12.7□□□□□ -0.38
DDX23-215ENST00000552555 BICC1Q9H694 974 aaKnown RBP12.7□□□□□ -0.38
DDX23-215ENST00000552555 ARFGEF2Q9Y6D5 1785 aa12.7□□□□□ -0.38
DDX23-215ENST00000552555 NUP188Q5SRE5 1749 aa12.7□□□□□ -0.38
DDX23-215ENST00000552555 PIP4K2AP48426 406 aaPredicted RBP12.69□□□□□ -0.38
DDX23-215ENST00000552555 PRIM1P49642 420 aaKnown RBP12.69□□□□□ -0.38
DDX23-215ENST00000552555 C22orf23Q9BZE7 217 aa12.69□□□□□ -0.38
DDX23-215ENST00000552555 COPRSQ9NQ92 184 aa12.69□□□□□ -0.38
DDX23-215ENST00000552555 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.68□□□□□ -0.38
DDX23-215ENST00000552555 RFX5P48382 616 aaPredicted RBP12.68□□□□□ -0.38
DDX23-215ENST00000552555 TCIRG1Q13488 830 aa12.68□□□□□ -0.38
DDX23-215ENST00000552555 EPHA10Q5JZY3 1008 aa12.68□□□□□ -0.38
DDX23-215ENST00000552555 CWC25Q9NXE8 425 aaPredicted RBP12.68□□□□□ -0.38
DDX23-215ENST00000552555 APBB1O00213 710 aa12.67□□□□□ -0.38
DDX23-215ENST00000552555 IL6STP40189 918 aaPredicted RBP12.67□□□□□ -0.38
DDX23-215ENST00000552555 NGLY1Q96IV0 654 aa12.67□□□□□ -0.38
DDX23-215ENST00000552555 DOT1LQ8TEK3 1739 aa12.67□□□□□ -0.38
DDX23-215ENST00000552555 TTC41PQ6P2S7 1318 aa12.66□□□□□ -0.38
DDX23-215ENST00000552555 MAP3K15Q6ZN16 1313 aa12.66□□□□□ -0.38
DDX23-215ENST00000552555 A0A087WZG4 1122 aa12.66□□□□□ -0.38
DDX23-215ENST00000552555 ERVV-1B6SEH8 477 aa12.66□□□□□ -0.38
DDX23-215ENST00000552555 MFAP1P55081 439 aaKnown RBP12.66□□□□□ -0.38
DDX23-215ENST00000552555 FOXO4P98177 505 aa12.66□□□□□ -0.38
DDX23-215ENST00000552555 PI4K2BQ8TCG2 481 aa12.66□□□□□ -0.38
DDX23-215ENST00000552555 SMARCC1Q92922 1105 aaPredicted RBP12.66□□□□□ -0.38
DDX23-215ENST00000552555 PLA2G12BQ9BX93 195 aa12.66□□□□□ -0.38
DDX23-215ENST00000552555 ZNF831Q5JPB2 1677 aa12.66□□□□□ -0.38
DDX23-215ENST00000552555 RREB1Q92766 1687 aa12.66□□□□□ -0.38
DDX23-215ENST00000552555 TJP1Q07157 1748 aa12.65□□□□□ -0.38
DDX23-215ENST00000552555 THSD7AQ9UPZ6 1657 aa12.65□□□□□ -0.38
DDX23-215ENST00000552555 ATP5J2-PTCD1G3V325 749 aa12.65□□□□□ -0.38
DDX23-215ENST00000552555 EPB41L2O43491 1005 aaKnown RBP12.65□□□□□ -0.38
DDX23-215ENST00000552555 SASH1O94885 1247 aa12.65□□□□□ -0.38
DDX23-215ENST00000552555 HSP90AB3PQ58FF7 597 aa12.65□□□□□ -0.38
DDX23-215ENST00000552555 GIGYF2Q6Y7W6 1299 aaKnown RBP12.65□□□□□ -0.38
DDX23-215ENST00000552555 CLASRPQ8N2M8 674 aaKnown RBP12.65□□□□□ -0.38
DDX23-215ENST00000552555 C8orf37Q96NL8 207 aa12.65□□□□□ -0.38
DDX23-215ENST00000552555 RBM42Q9BTD8 480 aaKnown RBP12.65□□□□□ -0.38
DDX23-215ENST00000552555 IL1RAPL2Q9NP60 686 aa12.65□□□□□ -0.38
DDX23-215ENST00000552555 ONECUT3O60422 494 aaPredicted RBP12.64□□□□□ -0.39
DDX23-215ENST00000552555 EIF5P55010 431 aaKnown RBP12.64□□□□□ -0.39
DDX23-215ENST00000552555 PTPN12Q05209 780 aaKnown RBP12.64□□□□□ -0.39
DDX23-215ENST00000552555 CASC1Q6TDU7 716 aa12.64□□□□□ -0.39
DDX23-215ENST00000552555 KIF6Q6ZMV9 814 aa12.64□□□□□ -0.39
DDX23-215ENST00000552555 UBE3BQ7Z3V4 1068 aa12.64□□□□□ -0.39
DDX23-215ENST00000552555 TUBGCP6Q96RT7 1819 aa12.64□□□□□ -0.39
DDX23-215ENST00000552555 LOC102724428A0A0B4J2F2 783 aa12.63□□□□□ -0.39
DDX23-215ENST00000552555 RGL2O15211 777 aa12.63□□□□□ -0.39
DDX23-215ENST00000552555 PCCAP05165 728 aaPredicted RBP12.63□□□□□ -0.39
DDX23-215ENST00000552555 SIK1P57059 783 aa12.63□□□□□ -0.39
DDX23-215ENST00000552555 G3BP1Q13283 466 aaKnown RBP eCLIP12.63□□□□□ -0.39
DDX23-215ENST00000552555 BECN1Q14457 450 aa12.63□□□□□ -0.39
DDX23-215ENST00000552555 INTS5Q6P9B9 1019 aaKnown RBP12.63□□□□□ -0.39
DDX23-215ENST00000552555 SNX21Q969T3 373 aa12.63□□□□□ -0.39
DDX23-215ENST00000552555 KIF2CQ99661 725 aa12.63□□□□□ -0.39
DDX23-215ENST00000552555 ZBTB3Q9H5J0 574 aa12.63□□□□□ -0.39
DDX23-215ENST00000552555 USP21Q9UK80 565 aa12.63□□□□□ -0.39
DDX23-215ENST00000552555 PA2G4Q9UQ80 394 aaKnown RBP12.63□□□□□ -0.39
DDX23-215ENST00000552555 ZBTB1Q9Y2K1 713 aa12.63□□□□□ -0.39
DDX23-215ENST00000552555 CDHR2Q9BYE9 1310 aa12.62□□□□□ -0.39
DDX23-215ENST00000552555 GLRX3O76003 335 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms