RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 CWF19L2Q2TBE0 894 aaKnown RBP15.84■□□□□ 0.13
CACNB3-223ENST00000552480 MYD88Q99836 296 aa15.84■□□□□ 0.13
CACNB3-223ENST00000552480 C9orf78Q9NZ63 289 aaPredicted RBP15.84■□□□□ 0.13
CACNB3-223ENST00000552480 AFDNP55196 1824 aaKnown RBP15.84■□□□□ 0.13
CACNB3-223ENST00000552480 RREB1Q92766 1687 aa15.83■□□□□ 0.13
CACNB3-223ENST00000552480 NEURL1BA8MQ27 555 aa15.83■□□□□ 0.12
CACNB3-223ENST00000552480 NBPF7P0C2Y1 421 aaPredicted RBP15.83■□□□□ 0.12
CACNB3-223ENST00000552480 PDE4AP27815 886 aa15.83■□□□□ 0.12
CACNB3-223ENST00000552480 PALLDQ8WX93 1383 aa15.83■□□□□ 0.12
CACNB3-223ENST00000552480 GRM8O00222 908 aa15.82■□□□□ 0.12
CACNB3-223ENST00000552480 ANKRD45Q5TZF3 282 aa15.82■□□□□ 0.12
CACNB3-223ENST00000552480 TTLL7Q6ZT98 887 aa15.82■□□□□ 0.12
CACNB3-223ENST00000552480 KCNQ2O43526 872 aa15.81■□□□□ 0.12
CACNB3-223ENST00000552480 GCKRQ14397 625 aa15.81■□□□□ 0.12
CACNB3-223ENST00000552480 SSH3Q8TE77 659 aa15.81■□□□□ 0.12
CACNB3-223ENST00000552480 BACH2Q9BYV9 841 aa15.81■□□□□ 0.12
CACNB3-223ENST00000552480 LNPKQ9C0E8 428 aa15.81■□□□□ 0.12
CACNB3-223ENST00000552480 QTRT2Q9H974 415 aaKnown RBP15.81■□□□□ 0.12
CACNB3-223ENST00000552480 RBM19Q9Y4C8 960 aaKnown RBP15.81■□□□□ 0.12
CACNB3-223ENST00000552480 LOC102724428A0A0B4J2F2 783 aa15.8■□□□□ 0.12
CACNB3-223ENST00000552480 PNMA6EA0A0J9YXQ4 647 aa15.8■□□□□ 0.12
CACNB3-223ENST00000552480 SIK1P57059 783 aa15.8■□□□□ 0.12
CACNB3-223ENST00000552480 MTX1Q13505 466 aa15.8■□□□□ 0.12
CACNB3-223ENST00000552480 POLA2Q14181 598 aa15.8■□□□□ 0.12
CACNB3-223ENST00000552480 FAM161AQ3B820 660 aa15.8■□□□□ 0.12
CACNB3-223ENST00000552480 KIF6Q6ZMV9 814 aa15.8■□□□□ 0.12
CACNB3-223ENST00000552480 SEPT12Q8IYM1 358 aa15.8■□□□□ 0.12
CACNB3-223ENST00000552480 COL5A3P25940 1745 aaPredicted RBP15.8■□□□□ 0.12
CACNB3-223ENST00000552480 COL15A1P39059 1388 aa15.79■□□□□ 0.12
CACNB3-223ENST00000552480 ATP6V1AP38606 617 aa15.79■□□□□ 0.12
CACNB3-223ENST00000552480 ZBTB47Q9UFB7 747 aaPredicted RBP15.79■□□□□ 0.12
CACNB3-223ENST00000552480 BTAF1O14981 1849 aa15.79■□□□□ 0.12
CACNB3-223ENST00000552480 IL6STP40189 918 aaPredicted RBP15.78■□□□□ 0.12
CACNB3-223ENST00000552480 PPP1R42Q7Z4L9 355 aa15.78■□□□□ 0.12
CACNB3-223ENST00000552480 SUCLG2Q96I99 432 aa15.78■□□□□ 0.12
CACNB3-223ENST00000552480 ZBTB3Q9H5J0 574 aa15.78■□□□□ 0.12
CACNB3-223ENST00000552480 ZBTB1Q9Y2K1 713 aa15.78■□□□□ 0.12
CACNB3-223ENST00000552480 KAT6BQ8WYB5 2073 aa15.77■□□□□ 0.12
CACNB3-223ENST00000552480 MAP3K15Q6ZN16 1313 aa15.77■□□□□ 0.12
CACNB3-223ENST00000552480 C8orf34Q49A92 452 aa15.77■□□□□ 0.12
CACNB3-223ENST00000552480 CCDC87Q9NVE4 849 aa15.77■□□□□ 0.12
CACNB3-223ENST00000552480 ZNF330Q9Y3S2 320 aaPredicted RBP15.77■□□□□ 0.12
CACNB3-223ENST00000552480 SBF2Q86WG5 1849 aa15.77■□□□□ 0.11
CACNB3-223ENST00000552480 ATP5J2-PTCD1G3V325 749 aa15.76■□□□□ 0.11
CACNB3-223ENST00000552480 SRGAP3O43295 1099 aa15.76■□□□□ 0.11
CACNB3-223ENST00000552480 ITPK1Q13572 414 aa15.76■□□□□ 0.11
CACNB3-223ENST00000552480 CWC25Q9NXE8 425 aaPredicted RBP15.76■□□□□ 0.11
CACNB3-223ENST00000552480 ANKRD36CQ5JPF3 1778 aa15.75■□□□□ 0.11
CACNB3-223ENST00000552480 CRKLP46109 303 aaKnown RBP15.75■□□□□ 0.11
CACNB3-223ENST00000552480 TCIRG1Q13488 830 aa15.75■□□□□ 0.11
CACNB3-223ENST00000552480 ZNF772Q68DY9 489 aaPredicted RBP15.75■□□□□ 0.11
CACNB3-223ENST00000552480 INTS5Q6P9B9 1019 aaKnown RBP15.75■□□□□ 0.11
CACNB3-223ENST00000552480 CCDC191Q8NCU4 936 aa15.75■□□□□ 0.11
CACNB3-223ENST00000552480 KAZALD1Q96I82 304 aa15.75■□□□□ 0.11
CACNB3-223ENST00000552480 ISCA1Q9BUE6 129 aa15.75■□□□□ 0.11
CACNB3-223ENST00000552480 BICC1Q9H694 974 aaKnown RBP15.75■□□□□ 0.11
CACNB3-223ENST00000552480 EXOC6BQ9Y2D4 811 aa15.75■□□□□ 0.11
CACNB3-223ENST00000552480 A0A087WZG4 1122 aa15.74■□□□□ 0.11
CACNB3-223ENST00000552480 RAB11FIP3O75154 756 aa15.74■□□□□ 0.11
CACNB3-223ENST00000552480 CASP7P55210 303 aa15.74■□□□□ 0.11
CACNB3-223ENST00000552480 TRIM28Q13263 835 aaKnown RBP15.74■□□□□ 0.11
CACNB3-223ENST00000552480 GIGYF2Q6Y7W6 1299 aaKnown RBP15.74■□□□□ 0.11
CACNB3-223ENST00000552480 LRRCC1Q9C099 1032 aa15.74■□□□□ 0.11
CACNB3-223ENST00000552480 ERVV-1B6SEH8 477 aa15.73■□□□□ 0.11
CACNB3-223ENST00000552480 H7C1W4 665 aa15.73■□□□□ 0.11
CACNB3-223ENST00000552480 EIF5P55010 431 aaKnown RBP15.73■□□□□ 0.11
CACNB3-223ENST00000552480 HSP90AB4PQ58FF6 505 aa15.73■□□□□ 0.11
CACNB3-223ENST00000552480 HSP90AB3PQ58FF7 597 aa15.73■□□□□ 0.11
CACNB3-223ENST00000552480 FAM182BQ5T319 152 aa15.73■□□□□ 0.11
CACNB3-223ENST00000552480 UBE3BQ7Z3V4 1068 aa15.73■□□□□ 0.11
CACNB3-223ENST00000552480 NPM2Q86SE8 214 aaKnown RBP15.73■□□□□ 0.11
CACNB3-223ENST00000552480 LY75O60449 1722 aa15.73■□□□□ 0.11
CACNB3-223ENST00000552480 BRWD3Q6RI45 1802 aa15.73■□□□□ 0.11
CACNB3-223ENST00000552480 APBB1O00213 710 aa15.72■□□□□ 0.11
CACNB3-223ENST00000552480 SMARCA5O60264 1052 aaPredicted RBP15.72■□□□□ 0.11
CACNB3-223ENST00000552480 PTF1AQ7RTS3 328 aa15.72■□□□□ 0.11
CACNB3-223ENST00000552480 DZIP3Q86Y13 1208 aaKnown RBP15.72■□□□□ 0.11
CACNB3-223ENST00000552480 PLEKHM2Q8IWE5 1019 aa15.72■□□□□ 0.11
CACNB3-223ENST00000552480 NOP58Q9Y2X3 529 aaKnown RBP15.72■□□□□ 0.11
CACNB3-223ENST00000552480 CNTNAP4Q9C0A0 1308 aa15.71■□□□□ 0.11
CACNB3-223ENST00000552480 SURF6O75683 361 aaKnown RBP15.71■□□□□ 0.11
CACNB3-223ENST00000552480 RBM6P78332 1123 aaKnown RBP15.71■□□□□ 0.11
CACNB3-223ENST00000552480 RABL6Q3YEC7 729 aaPredicted RBP15.71■□□□□ 0.11
CACNB3-223ENST00000552480 LINC00116Q8NCU8 138 aa15.71■□□□□ 0.11
CACNB3-223ENST00000552480 BCORQ6W2J9 1755 aa15.7■□□□□ 0.1
CACNB3-223ENST00000552480 HLFQ16534 295 aa15.7■□□□□ 0.1
CACNB3-223ENST00000552480 BMP2KLQ5H9B9 411 aa15.7■□□□□ 0.1
CACNB3-223ENST00000552480 EPHA10Q5JZY3 1008 aa15.7■□□□□ 0.1
CACNB3-223ENST00000552480 KRT27Q7Z3Y8 459 aa15.7■□□□□ 0.1
CACNB3-223ENST00000552480 ARXQ96QS3 562 aa15.7■□□□□ 0.1
CACNB3-223ENST00000552480 BCL11BQ9C0K0 894 aaPredicted RBP15.7■□□□□ 0.1
CACNB3-223ENST00000552480 NUP98P52948 1817 aa15.7■□□□□ 0.1
CACNB3-223ENST00000552480 MYH14Q7Z406 1995 aaKnown RBP15.69■□□□□ 0.1
CACNB3-223ENST00000552480 SOCS7O14512 581 aa15.69■□□□□ 0.1
CACNB3-223ENST00000552480 PCCAP05165 728 aaPredicted RBP15.69■□□□□ 0.1
CACNB3-223ENST00000552480 FAM196AQ6ZSG2 479 aa15.69■□□□□ 0.1
CACNB3-223ENST00000552480 ERC1Q8IUD2 1116 aa15.69■□□□□ 0.1
CACNB3-223ENST00000552480 C16orf71Q8IYS4 520 aaPredicted RBP15.69■□□□□ 0.1
CACNB3-223ENST00000552480 RHPN1Q8TCX5 695 aa15.69■□□□□ 0.1
CACNB3-223ENST00000552480 JARID2Q92833 1246 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms