RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 DZIP3Q86Y13 1208 aaKnown RBP22.76■■□□□ 1.23
CACNB3-222ENST00000552465 SCN7AQ01118 1682 aa22.76■■□□□ 1.23
CACNB3-222ENST00000552465 COL11A2P13942 1736 aaPredicted RBP22.76■■□□□ 1.23
CACNB3-222ENST00000552465 C7orf43Q8WVR3 580 aa22.75■■□□□ 1.23
CACNB3-222ENST00000552465 COL3A1P02461 1466 aaPredicted RBP22.74■■□□□ 1.23
CACNB3-222ENST00000552465 IQCA1LA6NCM1 817 aa22.74■■□□□ 1.23
CACNB3-222ENST00000552465 BTBD11A6QL63 1104 aa22.74■■□□□ 1.23
CACNB3-222ENST00000552465 L3MBTL3Q96JM7 780 aaPredicted RBP22.74■■□□□ 1.23
CACNB3-222ENST00000552465 USP16Q9Y5T5 823 aa22.74■■□□□ 1.23
CACNB3-222ENST00000552465 DICER1Q9UPY3 1922 aaKnown RBP22.74■■□□□ 1.23
CACNB3-222ENST00000552465 CEMIPQ8WUJ3 1361 aa22.74■■□□□ 1.23
CACNB3-222ENST00000552465 LDHDQ86WU2 507 aa22.73■■□□□ 1.23
CACNB3-222ENST00000552465 TAF1DQ9H5J8 278 aaPredicted RBP22.73■■□□□ 1.23
CACNB3-222ENST00000552465 PASKQ96RG2 1323 aa22.73■■□□□ 1.23
CACNB3-222ENST00000552465 SLX4Q8IY92 1834 aa22.73■■□□□ 1.23
CACNB3-222ENST00000552465 CLEC4GQ6UXB4 293 aa22.72■■□□□ 1.23
CACNB3-222ENST00000552465 NBPF5PQ86XG9 351 aaPredicted RBP22.72■■□□□ 1.23
CACNB3-222ENST00000552465 CNTNAP1P78357 1384 aa22.72■■□□□ 1.23
CACNB3-222ENST00000552465 PIP4K2AP48426 406 aaPredicted RBP22.71■■□□□ 1.23
CACNB3-222ENST00000552465 CCDC93Q567U6 631 aa22.71■■□□□ 1.23
CACNB3-222ENST00000552465 PHACTR3Q96KR7 559 aa22.71■■□□□ 1.23
CACNB3-222ENST00000552465 PCNTO95613 3336 aa22.71■■□□□ 1.23
CACNB3-222ENST00000552465 KLRG2A4D1S0 409 aaPredicted RBP22.7■■□□□ 1.22
CACNB3-222ENST00000552465 FOXN1O15353 648 aa22.7■■□□□ 1.22
CACNB3-222ENST00000552465 NPR1P16066 1061 aa22.7■■□□□ 1.22
CACNB3-222ENST00000552465 SIPA1L3O60292 1781 aaPredicted RBP22.69■■□□□ 1.22
CACNB3-222ENST00000552465 NPC1L1Q9UHC9 1359 aa22.69■■□□□ 1.22
CACNB3-222ENST00000552465 PRAMEF22A3QJZ6 481 aa22.69■■□□□ 1.22
CACNB3-222ENST00000552465 ITGBL1O95965 494 aaPredicted RBP22.69■■□□□ 1.22
CACNB3-222ENST00000552465 FKBP4Q02790 459 aaKnown RBP eCLIP22.68■■□□□ 1.22
CACNB3-222ENST00000552465 CNGB1Q14028 1251 aaPredicted RBP22.68■■□□□ 1.22
CACNB3-222ENST00000552465 CCER1Q8TC90 406 aaPredicted RBP22.68■■□□□ 1.22
CACNB3-222ENST00000552465 PRDM10Q9NQV6 1147 aa22.68■■□□□ 1.22
CACNB3-222ENST00000552465 ZNF652Q9Y2D9 606 aa22.68■■□□□ 1.22
CACNB3-222ENST00000552465 TMEM88BA6NKF7 163 aa22.67■■□□□ 1.22
CACNB3-222ENST00000552465 SNRPA1P09661 255 aaKnown RBP22.67■■□□□ 1.22
CACNB3-222ENST00000552465 PRKAR2BP31323 418 aa22.67■■□□□ 1.22
CACNB3-222ENST00000552465 TPTE2Q6XPS3 522 aa22.67■■□□□ 1.22
CACNB3-222ENST00000552465 ZNF277Q9NRM2 450 aaPredicted RBP22.67■■□□□ 1.22
CACNB3-222ENST00000552465 ZNF541Q9H0D2 1346 aa22.66■■□□□ 1.22
CACNB3-222ENST00000552465 VEGFBP49765 207 aa22.66■■□□□ 1.22
CACNB3-222ENST00000552465 EAPPQ56P03 285 aaPredicted RBP22.66■■□□□ 1.22
CACNB3-222ENST00000552465 RSPH6AQ9H0K4 717 aa22.66■■□□□ 1.22
CACNB3-222ENST00000552465 HACL1Q9UJ83 578 aa22.66■■□□□ 1.22
CACNB3-222ENST00000552465 OLFM4Q6UX06 510 aa22.65■■□□□ 1.22
CACNB3-222ENST00000552465 RTKN2Q8IZC4 609 aa22.65■■□□□ 1.22
CACNB3-222ENST00000552465 NBPF26B4DH59 902 aa22.64■■□□□ 1.21
CACNB3-222ENST00000552465 RGL2O15211 777 aa22.64■■□□□ 1.21
CACNB3-222ENST00000552465 CTCFP49711 727 aaPredicted RBP22.64■■□□□ 1.21
CACNB3-222ENST00000552465 NBPF10Q6P3W6 841 aaKnown RBP22.64■■□□□ 1.21
CACNB3-222ENST00000552465 NBPF15Q8N660 670 aa22.64■■□□□ 1.21
CACNB3-222ENST00000552465 NIP7Q9Y221 180 aaKnown RBP eCLIP22.64■■□□□ 1.21
CACNB3-222ENST00000552465 CLEC11AQ9Y240 323 aa22.64■■□□□ 1.21
CACNB3-222ENST00000552465 BCORQ6W2J9 1755 aa22.63■■□□□ 1.21
CACNB3-222ENST00000552465 ARFGEF2Q9Y6D5 1785 aa22.63■■□□□ 1.21
CACNB3-222ENST00000552465 EPHX2P34913 555 aa22.63■■□□□ 1.21
CACNB3-222ENST00000552465 AIDAQ96BJ3 306 aa22.63■■□□□ 1.21
CACNB3-222ENST00000552465 SCN4AP35499 1836 aa22.62■■□□□ 1.21
CACNB3-222ENST00000552465 ALDH1B1P30837 517 aa22.62■■□□□ 1.21
CACNB3-222ENST00000552465 MCM10Q7L590 875 aa22.62■■□□□ 1.21
CACNB3-222ENST00000552465 SYNE4Q8N205 404 aa22.62■■□□□ 1.21
CACNB3-222ENST00000552465 WBP1LQ9NX94 342 aa22.62■■□□□ 1.21
CACNB3-222ENST00000552465 FAM177BA6PVY3 158 aa22.61■■□□□ 1.21
CACNB3-222ENST00000552465 FZD9O00144 591 aa22.61■■□□□ 1.21
CACNB3-222ENST00000552465 IARSP41252 1262 aaKnown RBP22.61■■□□□ 1.21
CACNB3-222ENST00000552465 PNMA8AQ86V59 439 aaPredicted RBP22.61■■□□□ 1.21
CACNB3-222ENST00000552465 RTF1Q92541 710 aaKnown RBP22.61■■□□□ 1.21
CACNB3-222ENST00000552465 CFAP53Q96M91 514 aa22.61■■□□□ 1.21
CACNB3-222ENST00000552465 CACNA1SQ13698 1873 aa22.6■■□□□ 1.21
CACNB3-222ENST00000552465 CNTROBQ8N137 903 aa22.6■■□□□ 1.21
CACNB3-222ENST00000552465 RNF123Q5XPI4 1314 aa22.59■■□□□ 1.21
CACNB3-222ENST00000552465 HLFQ16534 295 aa22.59■■□□□ 1.21
CACNB3-222ENST00000552465 NUDCQ9Y266 331 aa22.59■■□□□ 1.21
CACNB3-222ENST00000552465 RASSF10A6NK89 507 aa22.58■■□□□ 1.21
CACNB3-222ENST00000552465 DEFB115Q30KQ5 88 aa22.58■■□□□ 1.21
CACNB3-222ENST00000552465 MAP1SQ66K74 1059 aaPredicted RBP22.58■■□□□ 1.21
CACNB3-222ENST00000552465 GPC2Q8N158 579 aa22.58■■□□□ 1.21
CACNB3-222ENST00000552465 GTF2E1P29083 439 aaPredicted RBP22.57■■□□□ 1.2
CACNB3-222ENST00000552465 LBX1P52954 281 aa22.57■■□□□ 1.2
CACNB3-222ENST00000552465 DCTN1Q14203 1278 aa22.57■■□□□ 1.2
CACNB3-222ENST00000552465 U2AF1L5P0DN76 240 aaPredicted RBP22.56■■□□□ 1.2
CACNB3-222ENST00000552465 U2AF1Q01081 240 aaKnown RBP eCLIP22.56■■□□□ 1.2
CACNB3-222ENST00000552465 JDP2Q8WYK2 163 aa22.56■■□□□ 1.2
CACNB3-222ENST00000552465 PSMD1Q99460 953 aa22.56■■□□□ 1.2
CACNB3-222ENST00000552465 HTATSF1O43719 755 aaKnown RBP22.55■■□□□ 1.2
CACNB3-222ENST00000552465 CRY2Q49AN0 593 aa22.55■■□□□ 1.2
CACNB3-222ENST00000552465 ADAMTSL1Q8N6G6 1762 aa22.55■■□□□ 1.2
CACNB3-222ENST00000552465 TAF7Q15545 349 aaPredicted RBP22.54■■□□□ 1.2
CACNB3-222ENST00000552465 CC2D2BQ6DHV5 1058 aa22.53■■□□□ 1.2
CACNB3-222ENST00000552465 NYXQ9GZU5 481 aa22.53■■□□□ 1.2
CACNB3-222ENST00000552465 SNED1Q8TER0 1413 aa22.53■■□□□ 1.2
CACNB3-222ENST00000552465 WDR33Q9C0J8 1336 aaKnown RBP22.53■■□□□ 1.2
CACNB3-222ENST00000552465 HSPA8P11142 646 aaKnown RBP22.52■■□□□ 1.2
CACNB3-222ENST00000552465 EIF6P56537 245 aaKnown RBP22.52■■□□□ 1.2
CACNB3-222ENST00000552465 NUTM1Q86Y26 1132 aa22.52■■□□□ 1.2
CACNB3-222ENST00000552465 MIS18AQ9NYP9 233 aa22.52■■□□□ 1.2
CACNB3-222ENST00000552465 ABT1Q9ULW3 272 aaKnown RBP22.52■■□□□ 1.2
CACNB3-222ENST00000552465 ERVV-1B6SEH8 477 aa22.51■■□□□ 1.19
CACNB3-222ENST00000552465 MAP2K1Q02750 393 aaPredicted RBP22.51■■□□□ 1.19
CACNB3-222ENST00000552465 NGEFQ8N5V2 710 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms