RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 PTGIRP43119 386 aa10.46□□□□□ -0.73
DEPDC4-210ENST00000551642 KDF1Q8NAX2 398 aaPredicted RBP10.46□□□□□ -0.73
DEPDC4-210ENST00000551642 CDK11AQ9UQ88 783 aaPredicted RBP10.46□□□□□ -0.73
DEPDC4-210ENST00000551642 ABCC3O15438 1527 aa10.46□□□□□ -0.74
DEPDC4-210ENST00000551642 CEP350Q5VT06 3117 aa10.46□□□□□ -0.74
DEPDC4-210ENST00000551642 CHD2O14647 1828 aaKnown RBP10.45□□□□□ -0.74
DEPDC4-210ENST00000551642 MSH6P52701 1360 aa10.45□□□□□ -0.74
DEPDC4-210ENST00000551642 ERVK-9P63128 1117 aa10.45□□□□□ -0.74
DEPDC4-210ENST00000551642 RELBQ01201 579 aa10.45□□□□□ -0.74
DEPDC4-210ENST00000551642 TXNDC2Q86VQ3 553 aa10.45□□□□□ -0.74
DEPDC4-210ENST00000551642 ZNF777Q9ULD5 760 aaPredicted RBP10.45□□□□□ -0.74
DEPDC4-210ENST00000551642 BRWD3Q6RI45 1802 aa10.44□□□□□ -0.74
DEPDC4-210ENST00000551642 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.44□□□□□ -0.74
DEPDC4-210ENST00000551642 NKTRP30414 1462 aaKnown RBP10.44□□□□□ -0.74
DEPDC4-210ENST00000551642 IRF5Q13568 498 aa10.44□□□□□ -0.74
DEPDC4-210ENST00000551642 DEFB132Q7Z7B7 95 aa10.44□□□□□ -0.74
DEPDC4-210ENST00000551642 C8orf37Q96NL8 207 aa10.44□□□□□ -0.74
DEPDC4-210ENST00000551642 ERVK-7P63135 1459 aa10.43□□□□□ -0.74
DEPDC4-210ENST00000551642 CTSOP43234 321 aaPredicted RBP10.43□□□□□ -0.74
DEPDC4-210ENST00000551642 INSM1Q01101 510 aaPredicted RBP10.43□□□□□ -0.74
DEPDC4-210ENST00000551642 MCM6Q14566 821 aa10.43□□□□□ -0.74
DEPDC4-210ENST00000551642 CC2D2BQ6DHV5 1058 aa10.43□□□□□ -0.74
DEPDC4-210ENST00000551642 INSM2Q96T92 566 aaPredicted RBP10.43□□□□□ -0.74
DEPDC4-210ENST00000551642 CYLDQ9NQC7 956 aa10.43□□□□□ -0.74
DEPDC4-210ENST00000551642 CEP126Q9P2H0 1117 aa10.43□□□□□ -0.74
DEPDC4-210ENST00000551642 KIAA1107Q9UPP5 1409 aa10.42□□□□□ -0.74
DEPDC4-210ENST00000551642 DHX29Q7Z478 1369 aaKnown RBP10.42□□□□□ -0.74
DEPDC4-210ENST00000551642 WASHC2CQ9Y4E1 1318 aa10.42□□□□□ -0.74
DEPDC4-210ENST00000551642 SENP3-EIF4A1A0A087X0R7 540 aa10.42□□□□□ -0.74
DEPDC4-210ENST00000551642 PPFIA3O75145 1194 aa10.42□□□□□ -0.74
DEPDC4-210ENST00000551642 VEGFBP49765 207 aa10.42□□□□□ -0.74
DEPDC4-210ENST00000551642 EIF4G2P78344 907 aaKnown RBP eCLIP10.42□□□□□ -0.74
DEPDC4-210ENST00000551642 ZNF395Q9H8N7 513 aaPredicted RBP10.42□□□□□ -0.74
DEPDC4-210ENST00000551642 GPATCH8Q9UKJ3 1502 aaKnown RBP10.42□□□□□ -0.74
DEPDC4-210ENST00000551642 KIF3BO15066 747 aa10.41□□□□□ -0.74
DEPDC4-210ENST00000551642 NGLY1Q96IV0 654 aa10.41□□□□□ -0.74
DEPDC4-210ENST00000551642 PIK3C2BO00750 1634 aa10.4□□□□□ -0.74
DEPDC4-210ENST00000551642 ERBB4Q15303 1308 aa10.4□□□□□ -0.74
DEPDC4-210ENST00000551642 FIGNL2A6NMB9 653 aa10.4□□□□□ -0.74
DEPDC4-210ENST00000551642 ATP5J2-PTCD1G3V325 749 aa10.4□□□□□ -0.74
DEPDC4-210ENST00000551642 GMPRP36959 345 aa10.4□□□□□ -0.74
DEPDC4-210ENST00000551642 PTSQ03393 145 aa10.4□□□□□ -0.74
DEPDC4-210ENST00000551642 WASHC4Q2M389 1173 aa10.4□□□□□ -0.74
DEPDC4-210ENST00000551642 RNF217Q8TC41 542 aa10.4□□□□□ -0.74
DEPDC4-210ENST00000551642 GDPD2Q9HCC8 539 aa10.4□□□□□ -0.74
DEPDC4-210ENST00000551642 POLMQ9NP87 494 aaPredicted RBP10.4□□□□□ -0.74
DEPDC4-210ENST00000551642 CEP152O94986 1710 aa10.4□□□□□ -0.74
DEPDC4-210ENST00000551642 CAMSAP2Q08AD1 1489 aa10.39□□□□□ -0.75
DEPDC4-210ENST00000551642 SLC26A8Q96RN1 970 aa10.39□□□□□ -0.75
DEPDC4-210ENST00000551642 BLMP54132 1417 aaPredicted RBP10.39□□□□□ -0.75
DEPDC4-210ENST00000551642 SETD5Q9C0A6 1442 aa10.39□□□□□ -0.75
DEPDC4-210ENST00000551642 SLC35F4A4IF30 521 aa10.38□□□□□ -0.75
DEPDC4-210ENST00000551642 TRAK2O60296 914 aa10.38□□□□□ -0.75
DEPDC4-210ENST00000551642 GPC1P35052 558 aa10.38□□□□□ -0.75
DEPDC4-210ENST00000551642 RNF144AP50876 292 aaPredicted RBP10.38□□□□□ -0.75
DEPDC4-210ENST00000551642 FOXD4L5Q5VV16 416 aaPredicted RBP10.38□□□□□ -0.75
DEPDC4-210ENST00000551642 PCDHB11Q9Y5F2 797 aa10.38□□□□□ -0.75
DEPDC4-210ENST00000551642 ATRNO75882 1429 aa10.38□□□□□ -0.75
DEPDC4-210ENST00000551642 FMN1Q68DA7 1419 aa10.37□□□□□ -0.75
DEPDC4-210ENST00000551642 CYP2U1Q7Z449 544 aa10.37□□□□□ -0.75
DEPDC4-210ENST00000551642 PHTF2Q8N3S3 785 aa10.37□□□□□ -0.75
DEPDC4-210ENST00000551642 CAMTA1Q9Y6Y1 1673 aa10.37□□□□□ -0.75
DEPDC4-210ENST00000551642 MBD5Q9P267 1494 aa10.36□□□□□ -0.75
DEPDC4-210ENST00000551642 BRINP3Q76B58 766 aa10.36□□□□□ -0.75
DEPDC4-210ENST00000551642 NANOS1Q8WY41 292 aaKnown RBP10.36□□□□□ -0.75
DEPDC4-210ENST00000551642 TMEM2Q9UHN6 1383 aa10.36□□□□□ -0.75
DEPDC4-210ENST00000551642 PLEKHH2Q8IVE3 1493 aa10.36□□□□□ -0.75
DEPDC4-210ENST00000551642 RTEL1-TNFRSF6BF6WH68 1400 aa10.35□□□□□ -0.75
DEPDC4-210ENST00000551642 SOX11P35716 441 aa10.35□□□□□ -0.75
DEPDC4-210ENST00000551642 ABL2P42684 1182 aa10.35□□□□□ -0.75
DEPDC4-210ENST00000551642 SCTRP47872 440 aa10.35□□□□□ -0.75
DEPDC4-210ENST00000551642 CCDC155Q8N6L0 562 aa10.35□□□□□ -0.75
DEPDC4-210ENST00000551642 CCDC85AQ96PX6 553 aaPredicted RBP10.35□□□□□ -0.75
DEPDC4-210ENST00000551642 OSBPL3Q9H4L5 887 aa10.35□□□□□ -0.75
DEPDC4-210ENST00000551642 CHIC2Q9UKJ5 165 aa10.35□□□□□ -0.75
DEPDC4-210ENST00000551642 MROH1Q8NDA8 1641 aa10.35□□□□□ -0.75
DEPDC4-210ENST00000551642 PNPLA6Q8IY17 1366 aa10.35□□□□□ -0.75
DEPDC4-210ENST00000551642 ARHGAP35Q9NRY4 1499 aa10.35□□□□□ -0.75
DEPDC4-210ENST00000551642 ASXL1Q8IXJ9 1541 aa10.34□□□□□ -0.75
DEPDC4-210ENST00000551642 A0A1W2PRU2 124 aa10.34□□□□□ -0.75
DEPDC4-210ENST00000551642 VAC14Q08AM6 782 aa10.34□□□□□ -0.75
DEPDC4-210ENST00000551642 LYSMD3Q7Z3D4 306 aa10.34□□□□□ -0.75
DEPDC4-210ENST00000551642 STK17AQ9UEE5 414 aa10.34□□□□□ -0.75
DEPDC4-210ENST00000551642 USP21Q9UK80 565 aa10.34□□□□□ -0.75
DEPDC4-210ENST00000551642 COG6Q9Y2V7 657 aa10.34□□□□□ -0.75
DEPDC4-210ENST00000551642 ADAMTS2O95450 1211 aa10.33□□□□□ -0.76
DEPDC4-210ENST00000551642 FLIIQ13045 1269 aa10.33□□□□□ -0.76
DEPDC4-210ENST00000551642 TMEM132AQ24JP5 1023 aa10.33□□□□□ -0.76
DEPDC4-210ENST00000551642 TRPC5Q9UL62 973 aaPredicted RBP10.33□□□□□ -0.76
DEPDC4-210ENST00000551642 EID1Q9Y6B2 187 aa10.33□□□□□ -0.76
DEPDC4-210ENST00000551642 UNC13BO14795 1591 aa10.33□□□□□ -0.76
DEPDC4-210ENST00000551642 SPHKAPQ2M3C7 1700 aa10.33□□□□□ -0.76
DEPDC4-210ENST00000551642 MARF1Q9Y4F3 1742 aaKnown RBP10.33□□□□□ -0.76
DEPDC4-210ENST00000551642 ZNF644Q9H582 1327 aaPredicted RBP10.33□□□□□ -0.76
DEPDC4-210ENST00000551642 GNRH1P01148 92 aa10.32□□□□□ -0.76
DEPDC4-210ENST00000551642 C1QTNF8P60827 252 aa10.32□□□□□ -0.76
DEPDC4-210ENST00000551642 CLN3Q13286 438 aa10.32□□□□□ -0.76
DEPDC4-210ENST00000551642 GLI3P10071 1580 aa10.31□□□□□ -0.76
DEPDC4-210ENST00000551642 MYCP01106 439 aaPredicted RBP10.31□□□□□ -0.76
DEPDC4-210ENST00000551642 SLFNL1Q499Z3 407 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms