RNA–Protein interactions for RNA: ENST00000551485.5

PFKM-223, Transcript of phosphofructokinase, muscle, human

TSL 5

Gene PFKM, Length 689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-223	ENST00000551485	ST5	P78524	1137 aa		14.35	□□□□□ -0.11
PFKM-223	ENST00000551485	SOGA3	Q5TF21	947 aa		14.35	□□□□□ -0.11
PFKM-223	ENST00000551485	FMNL2	Q96PY5	1086 aa		14.35	□□□□□ -0.11
PFKM-223	ENST00000551485	KIF7	Q2M1P5	1343 aa		14.35	□□□□□ -0.11
PFKM-223	ENST00000551485	CC2D1B	Q5T0F9	858 aa	Known RBP	14.34	□□□□□ -0.11
PFKM-223	ENST00000551485	NPM2	Q86SE8	214 aa	Known RBP	14.34	□□□□□ -0.11
PFKM-223	ENST00000551485	MASTL	Q96GX5	879 aa		14.34	□□□□□ -0.11
PFKM-223	ENST00000551485	CNTNAP1	P78357	1384 aa		14.34	□□□□□ -0.11
PFKM-223	ENST00000551485	IQCA1L	A6NCM1	817 aa		14.33	□□□□□ -0.12
PFKM-223	ENST00000551485	U2SURP	O15042	1029 aa	Known RBP	14.33	□□□□□ -0.12
PFKM-223	ENST00000551485	PER1	O15534	1290 aa	Predicted RBP	14.33	□□□□□ -0.12
PFKM-223	ENST00000551485	DZIP3	Q86Y13	1208 aa	Known RBP	14.33	□□□□□ -0.12
PFKM-223	ENST00000551485	SCN4A	P35499	1836 aa		14.33	□□□□□ -0.12
PFKM-223	ENST00000551485	CEMIP	Q8WUJ3	1361 aa		14.33	□□□□□ -0.12
PFKM-223	ENST00000551485	LDHD	Q86WU2	507 aa		14.32	□□□□□ -0.12
PFKM-223	ENST00000551485	L3MBTL3	Q96JM7	780 aa	Predicted RBP	14.32	□□□□□ -0.12
PFKM-223	ENST00000551485	PASK	Q96RG2	1323 aa		14.32	□□□□□ -0.12
PFKM-223	ENST00000551485	FOXN1	O15353	648 aa		14.31	□□□□□ -0.12
PFKM-223	ENST00000551485	KCNQ3	O43525	872 aa		14.31	□□□□□ -0.12
PFKM-223	ENST00000551485	CCDC93	Q567U6	631 aa		14.31	□□□□□ -0.12
PFKM-223	ENST00000551485	C7orf43	Q8WVR3	580 aa		14.31	□□□□□ -0.12
PFKM-223	ENST00000551485	TAF1D	Q9H5J8	278 aa	Predicted RBP	14.31	□□□□□ -0.12
PFKM-223	ENST00000551485	BTBD11	A6QL63	1104 aa		14.3	□□□□□ -0.12
PFKM-223	ENST00000551485	NBPF5P	Q86XG9	351 aa	Predicted RBP	14.3	□□□□□ -0.12
PFKM-223	ENST00000551485	NPC1L1	Q9UHC9	1359 aa		14.3	□□□□□ -0.12
PFKM-223	ENST00000551485	PIP4K2A	P48426	406 aa	Predicted RBP	14.29	□□□□□ -0.12
PFKM-223	ENST00000551485	FKBP4	Q02790	459 aa	Known RBP eCLIP	14.29	□□□□□ -0.12
PFKM-223	ENST00000551485	CLEC4G	Q6UXB4	293 aa		14.29	□□□□□ -0.12
PFKM-223	ENST00000551485	PRDM10	Q9NQV6	1147 aa		14.29	□□□□□ -0.12
PFKM-223	ENST00000551485	USP16	Q9Y5T5	823 aa		14.29	□□□□□ -0.12
PFKM-223	ENST00000551485	TMEM88B	A6NKF7	163 aa		14.28	□□□□□ -0.12
PFKM-223	ENST00000551485	NPR1	P16066	1061 aa		14.28	□□□□□ -0.12
PFKM-223	ENST00000551485	ZNF541	Q9H0D2	1346 aa		14.28	□□□□□ -0.12
PFKM-223	ENST00000551485	ZNF652	Q9Y2D9	606 aa		14.28	□□□□□ -0.12
PFKM-223	ENST00000551485	ADAMTSL1	Q8N6G6	1762 aa		14.27	□□□□□ -0.12
PFKM-223	ENST00000551485	KLRG2	A4D1S0	409 aa	Predicted RBP	14.27	□□□□□ -0.13
PFKM-223	ENST00000551485	ITGBL1	O95965	494 aa	Predicted RBP	14.27	□□□□□ -0.13
PFKM-223	ENST00000551485	VEGFB	P49765	207 aa		14.27	□□□□□ -0.13
PFKM-223	ENST00000551485	EAPP	Q56P03	285 aa	Predicted RBP	14.27	□□□□□ -0.13
PFKM-223	ENST00000551485	AIDA	Q96BJ3	306 aa		14.27	□□□□□ -0.13
PFKM-223	ENST00000551485	PHACTR3	Q96KR7	559 aa		14.27	□□□□□ -0.13
PFKM-223	ENST00000551485	ZNF277	Q9NRM2	450 aa	Predicted RBP	14.27	□□□□□ -0.13
PFKM-223	ENST00000551485	PRAMEF22	A3QJZ6	481 aa		14.26	□□□□□ -0.13
PFKM-223	ENST00000551485	RGL2	O15211	777 aa		14.26	□□□□□ -0.13
PFKM-223	ENST00000551485	PRKAR2B	P31323	418 aa		14.26	□□□□□ -0.13
PFKM-223	ENST00000551485	CTCF	P49711	727 aa	Predicted RBP	14.26	□□□□□ -0.13
PFKM-223	ENST00000551485	RSPH6A	Q9H0K4	717 aa		14.26	□□□□□ -0.13
PFKM-223	ENST00000551485	HACL1	Q9UJ83	578 aa		14.26	□□□□□ -0.13
PFKM-223	ENST00000551485	SNRPA1	P09661	255 aa	Known RBP	14.25	□□□□□ -0.13
PFKM-223	ENST00000551485	EPHX2	P34913	555 aa		14.25	□□□□□ -0.13
PFKM-223	ENST00000551485	CNGB1	Q14028	1251 aa	Predicted RBP	14.25	□□□□□ -0.13
PFKM-223	ENST00000551485	OLFM4	Q6UX06	510 aa		14.25	□□□□□ -0.13
PFKM-223	ENST00000551485	TPTE2	Q6XPS3	522 aa		14.25	□□□□□ -0.13
PFKM-223	ENST00000551485	RTKN2	Q8IZC4	609 aa		14.25	□□□□□ -0.13
PFKM-223	ENST00000551485	NIP7	Q9Y221	180 aa	Known RBP eCLIP	14.25	□□□□□ -0.13
PFKM-223	ENST00000551485	CCER1	Q8TC90	406 aa	Predicted RBP	14.24	□□□□□ -0.13
PFKM-223	ENST00000551485	WBP1L	Q9NX94	342 aa		14.24	□□□□□ -0.13
PFKM-223	ENST00000551485	CLEC11A	Q9Y240	323 aa		14.24	□□□□□ -0.13
PFKM-223	ENST00000551485	RNF123	Q5XPI4	1314 aa		14.23	□□□□□ -0.13
PFKM-223	ENST00000551485	NBPF26	B4DH59	902 aa		14.23	□□□□□ -0.13
PFKM-223	ENST00000551485	FZD9	O00144	591 aa		14.23	□□□□□ -0.13
PFKM-223	ENST00000551485	IARS	P41252	1262 aa	Known RBP	14.23	□□□□□ -0.13
PFKM-223	ENST00000551485	NBPF10	Q6P3W6	841 aa	Known RBP	14.23	□□□□□ -0.13
PFKM-223	ENST00000551485	PNMA8A	Q86V59	439 aa	Predicted RBP	14.23	□□□□□ -0.13
PFKM-223	ENST00000551485	NBPF15	Q8N660	670 aa		14.23	□□□□□ -0.13
PFKM-223	ENST00000551485	SNED1	Q8TER0	1413 aa		14.23	□□□□□ -0.13
PFKM-223	ENST00000551485	RASSF10	A6NK89	507 aa		14.22	□□□□□ -0.13
PFKM-223	ENST00000551485	FAM177B	A6PVY3	158 aa		14.22	□□□□□ -0.13
PFKM-223	ENST00000551485	MCM10	Q7L590	875 aa		14.22	□□□□□ -0.13
PFKM-223	ENST00000551485	CNTROB	Q8N137	903 aa		14.22	□□□□□ -0.13
PFKM-223	ENST00000551485	SYNE4	Q8N205	404 aa		14.22	□□□□□ -0.13
PFKM-223	ENST00000551485	RTF1	Q92541	710 aa	Known RBP	14.22	□□□□□ -0.13
PFKM-223	ENST00000551485	CFAP53	Q96M91	514 aa		14.22	□□□□□ -0.13
PFKM-223	ENST00000551485	ALDH1B1	P30837	517 aa		14.21	□□□□□ -0.13
PFKM-223	ENST00000551485	LBX1	P52954	281 aa		14.21	□□□□□ -0.13
PFKM-223	ENST00000551485	MAP1S	Q66K74	1059 aa	Predicted RBP	14.21	□□□□□ -0.13
PFKM-223	ENST00000551485	GPC2	Q8N158	579 aa		14.21	□□□□□ -0.13
PFKM-223	ENST00000551485	PSMD1	Q99460	953 aa		14.21	□□□□□ -0.13
PFKM-223	ENST00000551485	ABCC12	Q96J65	1359 aa		14.21	□□□□□ -0.14
PFKM-223	ENST00000551485	LAMB4	A4D0S4	1761 aa		14.2	□□□□□ -0.14
PFKM-223	ENST00000551485	GTF2E1	P29083	439 aa	Predicted RBP	14.2	□□□□□ -0.14
PFKM-223	ENST00000551485	HLF	Q16534	295 aa		14.2	□□□□□ -0.14
PFKM-223	ENST00000551485	DEFB115	Q30KQ5	88 aa		14.2	□□□□□ -0.14
PFKM-223	ENST00000551485	CRY2	Q49AN0	593 aa		14.2	□□□□□ -0.14
PFKM-223	ENST00000551485	NUDC	Q9Y266	331 aa		14.2	□□□□□ -0.14
PFKM-223	ENST00000551485	HSPA8	P11142	646 aa	Known RBP	14.19	□□□□□ -0.14
PFKM-223	ENST00000551485	DCTN1	Q14203	1278 aa		14.19	□□□□□ -0.14
PFKM-223	ENST00000551485	JDP2	Q8WYK2	163 aa		14.19	□□□□□ -0.14
PFKM-223	ENST00000551485	ABT1	Q9ULW3	272 aa	Known RBP	14.19	□□□□□ -0.14
PFKM-223	ENST00000551485	COL4A5	P29400	1685 aa		14.19	□□□□□ -0.14
PFKM-223	ENST00000551485	LTBP1	Q14766	1721 aa		14.18	□□□□□ -0.14
PFKM-223	ENST00000551485	WDR33	Q9C0J8	1336 aa	Known RBP	14.18	□□□□□ -0.14
PFKM-223	ENST00000551485	HTATSF1	O43719	755 aa	Known RBP	14.18	□□□□□ -0.14
PFKM-223	ENST00000551485	U2AF1L5	P0DN76	240 aa	Predicted RBP	14.18	□□□□□ -0.14
PFKM-223	ENST00000551485	U2AF1	Q01081	240 aa	Known RBP eCLIP	14.18	□□□□□ -0.14
PFKM-223	ENST00000551485	MAP2K1	Q02750	393 aa	Predicted RBP	14.18	□□□□□ -0.14
PFKM-223	ENST00000551485	CC2D2B	Q6DHV5	1058 aa		14.18	□□□□□ -0.14
PFKM-223	ENST00000551485	NYX	Q9GZU5	481 aa		14.18	□□□□□ -0.14
PFKM-223	ENST00000551485	THSD7B	Q9C0I4	1608 aa		14.17	□□□□□ -0.14
PFKM-223	ENST00000551485	LMOD1	P29536	600 aa	Predicted RBP	14.17	□□□□□ -0.14

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