RNA–Protein interactions for RNA: ENST00000550844.2

ATXN2-221, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-221ENST00000550844 LRP10Q7Z4F1 713 aa11.46□□□□□ -0.57
ATXN2-221ENST00000550844 BCL11BQ9C0K0 894 aaPredicted RBP11.46□□□□□ -0.57
ATXN2-221ENST00000550844 C9orf78Q9NZ63 289 aaPredicted RBP11.46□□□□□ -0.57
ATXN2-221ENST00000550844 ADCY9O60503 1353 aa11.46□□□□□ -0.57
ATXN2-221ENST00000550844 IGKV5-2P06315 115 aa11.46□□□□□ -0.57
ATXN2-221ENST00000550844 EZH2Q15910 746 aaKnown RBP11.46□□□□□ -0.57
ATXN2-221ENST00000550844 KSR2Q6VAB6 950 aa11.46□□□□□ -0.57
ATXN2-221ENST00000550844 RGS3P49796 1198 aa11.46□□□□□ -0.58
ATXN2-221ENST00000550844 DZIP3Q86Y13 1208 aaKnown RBP11.46□□□□□ -0.58
ATXN2-221ENST00000550844 SRCIN1Q9C0H9 1055 aa11.46□□□□□ -0.58
ATXN2-221ENST00000550844 BRWD3Q6RI45 1802 aa11.45□□□□□ -0.58
ATXN2-221ENST00000550844 TXNRD1Q16881 649 aa11.45□□□□□ -0.58
ATXN2-221ENST00000550844 PDGFDQ9GZP0 370 aaPredicted RBP11.45□□□□□ -0.58
ATXN2-221ENST00000550844 USP44Q9H0E7 712 aa11.45□□□□□ -0.58
ATXN2-221ENST00000550844 CCDC87Q9NVE4 849 aa11.45□□□□□ -0.58
ATXN2-221ENST00000550844 LRRFIP2Q9Y608 721 aaKnown RBP11.45□□□□□ -0.58
ATXN2-221ENST00000550844 UBE3BQ7Z3V4 1068 aa11.45□□□□□ -0.58
ATXN2-221ENST00000550844 FAM89AQ96GI7 184 aa11.45□□□□□ -0.58
ATXN2-221ENST00000550844 CHMP3Q9Y3E7 222 aa11.45□□□□□ -0.58
ATXN2-221ENST00000550844 HOXB7P09629 217 aa11.44□□□□□ -0.58
ATXN2-221ENST00000550844 KLHDC4Q8TBB5 520 aa11.44□□□□□ -0.58
ATXN2-221ENST00000550844 SMARCC1Q92922 1105 aaPredicted RBP11.44□□□□□ -0.58
ATXN2-221ENST00000550844 DDX19BQ9UMR2 479 aa11.44□□□□□ -0.58
ATXN2-221ENST00000550844 ABCC4O15439 1325 aa11.44□□□□□ -0.58
ATXN2-221ENST00000550844 BEND3Q5T5X7 828 aa11.44□□□□□ -0.58
ATXN2-221ENST00000550844 ZBTB40Q9NUA8 1239 aa11.44□□□□□ -0.58
ATXN2-221ENST00000550844 KCPQ6ZWJ8 1503 aa11.44□□□□□ -0.58
ATXN2-221ENST00000550844 PTPRCP08575 1304 aa11.43□□□□□ -0.58
ATXN2-221ENST00000550844 A0A087WZG4 1122 aa11.43□□□□□ -0.58
ATXN2-221ENST00000550844 DDX58O95786 925 aaKnown RBP11.43□□□□□ -0.58
ATXN2-221ENST00000550844 MSL1Q68DK7 614 aa11.43□□□□□ -0.58
ATXN2-221ENST00000550844 NUTM1Q86Y26 1132 aa11.43□□□□□ -0.58
ATXN2-221ENST00000550844 WWC3Q9ULE0 1092 aa11.43□□□□□ -0.58
ATXN2-221ENST00000550844 SIRT2Q8IXJ6 389 aa11.43□□□□□ -0.58
ATXN2-221ENST00000550844 ARHGAP45Q92619 1136 aa11.43□□□□□ -0.58
ATXN2-221ENST00000550844 C5P01031 1676 aa11.43□□□□□ -0.58
ATXN2-221ENST00000550844 NEXNQ0ZGT2 675 aa11.42□□□□□ -0.58
ATXN2-221ENST00000550844 USPL1Q5W0Q7 1092 aa11.42□□□□□ -0.58
ATXN2-221ENST00000550844 AK7Q96M32 723 aa11.42□□□□□ -0.58
ATXN2-221ENST00000550844 TFCP2L1Q9NZI6 479 aa11.42□□□□□ -0.58
ATXN2-221ENST00000550844 KDM3BQ7LBC6 1761 aa11.42□□□□□ -0.58
ATXN2-221ENST00000550844 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.42□□□□□ -0.58
ATXN2-221ENST00000550844 PNMA6EA0A0J9YXQ4 647 aa11.42□□□□□ -0.58
ATXN2-221ENST00000550844 KIF6Q6ZMV9 814 aa11.42□□□□□ -0.58
ATXN2-221ENST00000550844 MYH14Q7Z406 1995 aaKnown RBP11.42□□□□□ -0.58
ATXN2-221ENST00000550844 UBTFL1P0CB47 393 aaPredicted RBP11.42□□□□□ -0.58
ATXN2-221ENST00000550844 EPHA10Q5JZY3 1008 aa11.42□□□□□ -0.58
ATXN2-221ENST00000550844 INTS3Q68E01 1043 aaKnown RBP11.42□□□□□ -0.58
ATXN2-221ENST00000550844 SIL1Q9H173 461 aa11.42□□□□□ -0.58
ATXN2-221ENST00000550844 MRC1P22897 1456 aa11.41□□□□□ -0.58
ATXN2-221ENST00000550844 BRPF1P55201 1214 aaPredicted RBP11.41□□□□□ -0.58
ATXN2-221ENST00000550844 VSIG10Q8N0Z9 540 aa11.41□□□□□ -0.58
ATXN2-221ENST00000550844 ARHGEF1Q92888 912 aaKnown RBP11.41□□□□□ -0.58
ATXN2-221ENST00000550844 TEX13AQ9BXU3 409 aaPredicted RBP11.41□□□□□ -0.58
ATXN2-221ENST00000550844 PA2G4Q9UQ80 394 aaKnown RBP11.41□□□□□ -0.58
ATXN2-221ENST00000550844 EXOC6BQ9Y2D4 811 aa11.41□□□□□ -0.58
ATXN2-221ENST00000550844 SIPA1L3O60292 1781 aaPredicted RBP11.41□□□□□ -0.58
ATXN2-221ENST00000550844 NEURL1BA8MQ27 555 aa11.41□□□□□ -0.58
ATXN2-221ENST00000550844 SMARCA5O60264 1052 aaPredicted RBP11.41□□□□□ -0.58
ATXN2-221ENST00000550844 EIF5P55010 431 aaKnown RBP11.41□□□□□ -0.58
ATXN2-221ENST00000550844 ZNF827Q17R98 1081 aa11.41□□□□□ -0.58
ATXN2-221ENST00000550844 METTL22Q9BUU2 404 aaPredicted RBP11.41□□□□□ -0.58
ATXN2-221ENST00000550844 BRPF3Q9ULD4 1205 aa11.41□□□□□ -0.58
ATXN2-221ENST00000550844 HCLS1P14317 486 aaPredicted RBP11.4□□□□□ -0.58
ATXN2-221ENST00000550844 PLBD2Q8NHP8 589 aa11.4□□□□□ -0.58
ATXN2-221ENST00000550844 RTCBQ9Y3I0 505 aaKnown RBP11.4□□□□□ -0.58
ATXN2-221ENST00000550844 NPHP1O15259 732 aa11.4□□□□□ -0.58
ATXN2-221ENST00000550844 MS4A1P11836 297 aa11.4□□□□□ -0.58
ATXN2-221ENST00000550844 CCT4P50991 539 aaKnown RBP11.4□□□□□ -0.58
ATXN2-221ENST00000550844 SUCLG2Q96I99 432 aa11.4□□□□□ -0.58
ATXN2-221ENST00000550844 NIP7Q9Y221 180 aaKnown RBP eCLIP11.4□□□□□ -0.58
ATXN2-221ENST00000550844 THSD7AQ9UPZ6 1657 aa11.39□□□□□ -0.59
ATXN2-221ENST00000550844 RFC4P35249 363 aa11.39□□□□□ -0.59
ATXN2-221ENST00000550844 GCKRQ14397 625 aa11.39□□□□□ -0.59
ATXN2-221ENST00000550844 LNPKQ9C0E8 428 aa11.39□□□□□ -0.59
ATXN2-221ENST00000550844 SF3B2Q13435 895 aaKnown RBP11.39□□□□□ -0.59
ATXN2-221ENST00000550844 LINS1Q8NG48 757 aa11.39□□□□□ -0.59
ATXN2-221ENST00000550844 TRMT112Q9UI30 125 aaKnown RBP11.39□□□□□ -0.59
ATXN2-221ENST00000550844 ADAMTS7Q9UKP4 1686 aa11.39□□□□□ -0.59
ATXN2-221ENST00000550844 GRM8O00222 908 aa11.38□□□□□ -0.59
ATXN2-221ENST00000550844 SRGAP3O43295 1099 aa11.38□□□□□ -0.59
ATXN2-221ENST00000550844 IL6STP40189 918 aaPredicted RBP11.38□□□□□ -0.59
ATXN2-221ENST00000550844 PPP1R42Q7Z4L9 355 aa11.38□□□□□ -0.59
ATXN2-221ENST00000550844 BICC1Q9H694 974 aaKnown RBP11.38□□□□□ -0.59
ATXN2-221ENST00000550844 ZPR1O75312 459 aa11.38□□□□□ -0.59
ATXN2-221ENST00000550844 GNAI2P04899 355 aa11.38□□□□□ -0.59
ATXN2-221ENST00000550844 GTF2E1P29083 439 aaPredicted RBP11.38□□□□□ -0.59
ATXN2-221ENST00000550844 TRAPPC3LQ5T215 181 aa11.38□□□□□ -0.59
ATXN2-221ENST00000550844 C16orf71Q8IYS4 520 aaPredicted RBP11.38□□□□□ -0.59
ATXN2-221ENST00000550844 MAP3K15Q6ZN16 1313 aa11.38□□□□□ -0.59
ATXN2-221ENST00000550844 WNK3Q9BYP7 1800 aa11.38□□□□□ -0.59
ATXN2-221ENST00000550844 TCIRG1Q13488 830 aa11.38□□□□□ -0.59
ATXN2-221ENST00000550844 ANKRD45Q5TZF3 282 aa11.38□□□□□ -0.59
ATXN2-221ENST00000550844 TSHZ3Q63HK5 1081 aa11.38□□□□□ -0.59
ATXN2-221ENST00000550844 TBC1D9BQ66K14 1250 aa11.38□□□□□ -0.59
ATXN2-221ENST00000550844 SLC51AQ86UW1 340 aa11.38□□□□□ -0.59
ATXN2-221ENST00000550844 KAZALD1Q96I82 304 aa11.38□□□□□ -0.59
ATXN2-221ENST00000550844 ZNF594Q96JF6 807 aaPredicted RBP11.38□□□□□ -0.59
ATXN2-221ENST00000550844 BTAF1O14981 1849 aa11.37□□□□□ -0.59
ATXN2-221ENST00000550844 CEP85Q6P2H3 762 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms