RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 COG6Q9Y2V7 657 aa5.52□□□□□ -1.53
CCDC59-204ENST00000550589 PCDHB15Q9Y5E8 787 aa5.52□□□□□ -1.53
CCDC59-204ENST00000550589 EDC4Q6P2E9 1401 aaKnown RBP5.52□□□□□ -1.53
CCDC59-204ENST00000550589 ARHGEF40Q8TER5 1519 aa5.52□□□□□ -1.53
CCDC59-204ENST00000550589 RIMBP3CA6NJZ7 1639 aa5.52□□□□□ -1.53
CCDC59-204ENST00000550589 RIMBP3BA6NNM3 1639 aa5.52□□□□□ -1.53
CCDC59-204ENST00000550589 RIMBP3Q9UFD9 1639 aa5.52□□□□□ -1.53
CCDC59-204ENST00000550589 PLEKHG3A1L390 1219 aa5.51□□□□□ -1.53
CCDC59-204ENST00000550589 MVPQ14764 893 aaKnown RBP5.51□□□□□ -1.53
CCDC59-204ENST00000550589 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.51□□□□□ -1.53
CCDC59-204ENST00000550589 TMEM151AQ8N4L1 468 aa5.51□□□□□ -1.53
CCDC59-204ENST00000550589 PLEKHF1Q96S99 279 aa5.51□□□□□ -1.53
CCDC59-204ENST00000550589 SLC6A16Q9GZN6 736 aa5.51□□□□□ -1.53
CCDC59-204ENST00000550589 AATKQ6ZMQ8 1374 aa5.51□□□□□ -1.53
CCDC59-204ENST00000550589 TNRQ92752 1358 aa5.51□□□□□ -1.53
CCDC59-204ENST00000550589 FDX1P10109 184 aa5.51□□□□□ -1.53
CCDC59-204ENST00000550589 RGS3P49796 1198 aa5.51□□□□□ -1.53
CCDC59-204ENST00000550589 GNAI1P63096 354 aa5.51□□□□□ -1.53
CCDC59-204ENST00000550589 BECN1Q14457 450 aa5.51□□□□□ -1.53
CCDC59-204ENST00000550589 IQSEC2Q5JU85 1478 aa5.51□□□□□ -1.53
CCDC59-204ENST00000550589 MYSM1Q5VVJ2 828 aa5.51□□□□□ -1.53
CCDC59-204ENST00000550589 WAPLQ7Z5K2 1190 aa5.51□□□□□ -1.53
CCDC59-204ENST00000550589 NUDT16Q96DE0 195 aaKnown RBP5.51□□□□□ -1.53
CCDC59-204ENST00000550589 BRPF1P55201 1214 aaPredicted RBP5.5□□□□□ -1.53
CCDC59-204ENST00000550589 MSS51Q4VC12 460 aa5.5□□□□□ -1.53
CCDC59-204ENST00000550589 RSBN1LQ6PCB5 846 aaPredicted RBP5.5□□□□□ -1.53
CCDC59-204ENST00000550589 ATF7IPQ6VMQ6 1270 aa5.5□□□□□ -1.53
CCDC59-204ENST00000550589 POLKQ9UBT6 870 aa5.5□□□□□ -1.53
CCDC59-204ENST00000550589 LIMD1Q9UGP4 676 aa5.5□□□□□ -1.53
CCDC59-204ENST00000550589 PPIP5K1Q6PFW1 1433 aa5.5□□□□□ -1.53
CCDC59-204ENST00000550589 TMEM2Q9UHN6 1383 aa5.5□□□□□ -1.53
CCDC59-204ENST00000550589 SPTLC1O15269 473 aa5.5□□□□□ -1.53
CCDC59-204ENST00000550589 Q3C1V9 767 aa5.5□□□□□ -1.53
CCDC59-204ENST00000550589 LIAT1Q6ZQX7 453 aa5.5□□□□□ -1.53
CCDC59-204ENST00000550589 TXNDC2Q86VQ3 553 aa5.5□□□□□ -1.53
CCDC59-204ENST00000550589 THEMISQ8N1K5 641 aaPredicted RBP5.5□□□□□ -1.53
CCDC59-204ENST00000550589 PANK1Q8TE04 598 aa5.5□□□□□ -1.53
CCDC59-204ENST00000550589 ARHGAP45Q92619 1136 aa5.5□□□□□ -1.53
CCDC59-204ENST00000550589 USB1Q9BQ65 265 aaKnown RBP5.5□□□□□ -1.53
CCDC59-204ENST00000550589 CLTCQ00610 1675 aaKnown RBP5.49□□□□□ -1.53
CCDC59-204ENST00000550589 TECPR2O15040 1411 aa5.49□□□□□ -1.53
CCDC59-204ENST00000550589 PRKAR2BP31323 418 aa5.49□□□□□ -1.53
CCDC59-204ENST00000550589 MMP16P51512 607 aa5.49□□□□□ -1.53
CCDC59-204ENST00000550589 EXOSC9Q06265 439 aaKnown RBP5.49□□□□□ -1.53
CCDC59-204ENST00000550589 NFE2L2Q16236 605 aa5.49□□□□□ -1.53
CCDC59-204ENST00000550589 ANKLE1Q8NAG6 615 aa5.49□□□□□ -1.53
CCDC59-204ENST00000550589 IFT57Q9NWB7 429 aa5.49□□□□□ -1.53
CCDC59-204ENST00000550589 NLRP1Q9C000 1473 aa5.49□□□□□ -1.53
CCDC59-204ENST00000550589 CPSF1Q10570 1443 aaKnown RBP5.49□□□□□ -1.53
CCDC59-204ENST00000550589 GJA5P36382 358 aa5.48□□□□□ -1.53
CCDC59-204ENST00000550589 HDAC1Q13547 482 aaPredicted RBP5.48□□□□□ -1.53
CCDC59-204ENST00000550589 RIC3Q7Z5B4 369 aa5.48□□□□□ -1.53
CCDC59-204ENST00000550589 ITPRIPQ8IWB1 547 aa5.48□□□□□ -1.53
CCDC59-204ENST00000550589 KRTAP9-9Q9BYP9 154 aa5.48□□□□□ -1.53
CCDC59-204ENST00000550589 KRTAP9-4Q9BYQ2 154 aa5.48□□□□□ -1.53
CCDC59-204ENST00000550589 CD163L1Q9NR16 1453 aa5.48□□□□□ -1.53
CCDC59-204ENST00000550589 PLEKHG1Q9ULL1 1385 aa5.48□□□□□ -1.53
CCDC59-204ENST00000550589 DXOO77932 396 aaKnown RBP5.48□□□□□ -1.53
CCDC59-204ENST00000550589 C8orf34Q49A92 452 aa5.48□□□□□ -1.53
CCDC59-204ENST00000550589 BCL2L13Q9BXK5 485 aa5.48□□□□□ -1.53
CCDC59-204ENST00000550589 RSPH6AQ9H0K4 717 aa5.48□□□□□ -1.53
CCDC59-204ENST00000550589 ADGRB2O60241 1585 aa5.47□□□□□ -1.53
CCDC59-204ENST00000550589 TTC21AQ8NDW8 1320 aa5.47□□□□□ -1.53
CCDC59-204ENST00000550589 TERTO14746 1132 aaKnown RBP5.47□□□□□ -1.53
CCDC59-204ENST00000550589 IGHDP01880 384 aa5.47□□□□□ -1.53
CCDC59-204ENST00000550589 GGCXP38435 758 aa5.47□□□□□ -1.53
CCDC59-204ENST00000550589 QPCTQ16769 361 aa5.47□□□□□ -1.53
CCDC59-204ENST00000550589 SSH1Q8WYL5 1049 aa5.47□□□□□ -1.53
CCDC59-204ENST00000550589 TSR2Q969E8 191 aaKnown RBP5.47□□□□□ -1.53
CCDC59-204ENST00000550589 CHMP4AQ9BY43 222 aa5.47□□□□□ -1.53
CCDC59-204ENST00000550589 API5Q9BZZ5 524 aaKnown RBP5.47□□□□□ -1.53
CCDC59-204ENST00000550589 NOB1Q9ULX3 412 aaKnown RBP5.47□□□□□ -1.53
CCDC59-204ENST00000550589 TBX22Q9Y458 520 aa5.47□□□□□ -1.53
CCDC59-204ENST00000550589 SHPRHQ149N8 1683 aa5.47□□□□□ -1.53
CCDC59-204ENST00000550589 METP08581 1390 aa5.47□□□□□ -1.53
CCDC59-204ENST00000550589 TTC21BQ7Z4L5 1316 aa5.47□□□□□ -1.53
CCDC59-204ENST00000550589 CDK12Q9NYV4 1490 aaPredicted RBP5.47□□□□□ -1.53
CCDC59-204ENST00000550589 TRIM27P14373 513 aa5.47□□□□□ -1.53
CCDC59-204ENST00000550589 IL13P35225 146 aa5.47□□□□□ -1.53
CCDC59-204ENST00000550589 RETREG3Q86VR2 466 aa5.47□□□□□ -1.53
CCDC59-204ENST00000550589 CABLES1Q8TDN4 633 aa5.47□□□□□ -1.53
CCDC59-204ENST00000550589 GCC1Q96CN9 775 aa5.47□□□□□ -1.53
CCDC59-204ENST00000550589 FCF1Q9Y324 198 aaKnown RBP5.47□□□□□ -1.53
CCDC59-204ENST00000550589 LAS1LQ9Y4W2 734 aaKnown RBP5.47□□□□□ -1.53
CCDC59-204ENST00000550589 COL3A1P02461 1466 aaPredicted RBP5.46□□□□□ -1.54
CCDC59-204ENST00000550589 C6orf229H3BNL8 230 aa5.46□□□□□ -1.54
CCDC59-204ENST00000550589 SLC16A10Q8TF71 515 aa5.46□□□□□ -1.54
CCDC59-204ENST00000550589 RTF1Q92541 710 aaKnown RBP5.46□□□□□ -1.54
CCDC59-204ENST00000550589 POLR3EQ9NVU0 708 aa5.46□□□□□ -1.54
CCDC59-204ENST00000550589 CDC42BPGQ6DT37 1551 aa5.46□□□□□ -1.54
CCDC59-204ENST00000550589 TSPOAP1O95153 1857 aa5.46□□□□□ -1.54
CCDC59-204ENST00000550589 CFAP99D6REC4 459 aa5.45□□□□□ -1.54
CCDC59-204ENST00000550589 HMOX1P09601 288 aa5.45□□□□□ -1.54
CCDC59-204ENST00000550589 SLC19A1P41440 591 aa5.45□□□□□ -1.54
CCDC59-204ENST00000550589 DIXDC1Q155Q3 683 aa5.45□□□□□ -1.54
CCDC59-204ENST00000550589 TUSC1Q2TAM9 212 aa5.45□□□□□ -1.54
CCDC59-204ENST00000550589 NME9Q86XW9 330 aa5.45□□□□□ -1.54
CCDC59-204ENST00000550589 PROCA1Q8NCQ7 364 aaPredicted RBP5.45□□□□□ -1.54
CCDC59-204ENST00000550589 NGDNQ8NEJ9 315 aaKnown RBP5.45□□□□□ -1.54
CCDC59-204ENST00000550589 KRTAP4-7Q9BYR0 210 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms