RNA–Protein interactions for RNA: ENST00000549550.1

TCHP-208, Transcript of trichoplein keratin filament binding, humanhuman

TSL 3

Gene TCHP, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-208ENST00000549550 KIF7Q2M1P5 1343 aa20.84■□□□□ 0.93
TCHP-208ENST00000549550 CAMTA2O94983 1202 aa20.84■□□□□ 0.93
TCHP-208ENST00000549550 A1BGP04217 495 aa20.84■□□□□ 0.93
TCHP-208ENST00000549550 SRGNP10124 158 aa20.84■□□□□ 0.93
TCHP-208ENST00000549550 ST5P78524 1137 aa20.84■□□□□ 0.93
TCHP-208ENST00000549550 CC2D1BQ5T0F9 858 aaKnown RBP20.84■□□□□ 0.93
TCHP-208ENST00000549550 NPM2Q86SE8 214 aaKnown RBP20.84■□□□□ 0.93
TCHP-208ENST00000549550 FMNL2Q96PY5 1086 aa20.84■□□□□ 0.93
TCHP-208ENST00000549550 GAS2L2Q8NHY3 880 aa20.83■□□□□ 0.93
TCHP-208ENST00000549550 U2SURPO15042 1029 aaKnown RBP20.82■□□□□ 0.92
TCHP-208ENST00000549550 SOGA3Q5TF21 947 aa20.82■□□□□ 0.92
TCHP-208ENST00000549550 MASTLQ96GX5 879 aa20.82■□□□□ 0.92
TCHP-208ENST00000549550 PER1O15534 1290 aaPredicted RBP20.81■□□□□ 0.92
TCHP-208ENST00000549550 DZIP3Q86Y13 1208 aaKnown RBP20.81■□□□□ 0.92
TCHP-208ENST00000549550 CNTNAP1P78357 1384 aa20.81■□□□□ 0.92
TCHP-208ENST00000549550 IQCA1LA6NCM1 817 aa20.8■□□□□ 0.92
TCHP-208ENST00000549550 CEMIPQ8WUJ3 1361 aa20.8■□□□□ 0.92
TCHP-208ENST00000549550 PASKQ96RG2 1323 aa20.79■□□□□ 0.92
TCHP-208ENST00000549550 KCNQ3O43525 872 aa20.79■□□□□ 0.92
TCHP-208ENST00000549550 LDHDQ86WU2 507 aa20.79■□□□□ 0.92
TCHP-208ENST00000549550 FOXN1O15353 648 aa20.78■□□□□ 0.92
TCHP-208ENST00000549550 PIP4K2AP48426 406 aaPredicted RBP20.78■□□□□ 0.92
TCHP-208ENST00000549550 L3MBTL3Q96JM7 780 aaPredicted RBP20.78■□□□□ 0.92
TCHP-208ENST00000549550 TAF1DQ9H5J8 278 aaPredicted RBP20.78■□□□□ 0.92
TCHP-208ENST00000549550 ADAMTSL1Q8N6G6 1762 aa20.77■□□□□ 0.92
TCHP-208ENST00000549550 BTBD11A6QL63 1104 aa20.77■□□□□ 0.92
TCHP-208ENST00000549550 CCDC93Q567U6 631 aa20.77■□□□□ 0.92
TCHP-208ENST00000549550 NBPF5PQ86XG9 351 aaPredicted RBP20.77■□□□□ 0.92
TCHP-208ENST00000549550 C7orf43Q8WVR3 580 aa20.77■□□□□ 0.92
TCHP-208ENST00000549550 DIEXFQ68CQ4 756 aaKnown RBP20.76■□□□□ 0.91
TCHP-208ENST00000549550 USP16Q9Y5T5 823 aa20.76■□□□□ 0.91
TCHP-208ENST00000549550 CNGB1Q14028 1251 aaPredicted RBP20.75■□□□□ 0.91
TCHP-208ENST00000549550 ZNF541Q9H0D2 1346 aa20.75■□□□□ 0.91
TCHP-208ENST00000549550 PRAMEF22A3QJZ6 481 aa20.74■□□□□ 0.91
TCHP-208ENST00000549550 NPR1P16066 1061 aa20.74■□□□□ 0.91
TCHP-208ENST00000549550 FKBP4Q02790 459 aaKnown RBP eCLIP20.74■□□□□ 0.91
TCHP-208ENST00000549550 EAPPQ56P03 285 aaPredicted RBP20.74■□□□□ 0.91
TCHP-208ENST00000549550 CLEC4GQ6UXB4 293 aa20.74■□□□□ 0.91
TCHP-208ENST00000549550 PHACTR3Q96KR7 559 aa20.74■□□□□ 0.91
TCHP-208ENST00000549550 ZNF277Q9NRM2 450 aaPredicted RBP20.74■□□□□ 0.91
TCHP-208ENST00000549550 ZNF652Q9Y2D9 606 aa20.74■□□□□ 0.91
TCHP-208ENST00000549550 TMEM88BA6NKF7 163 aa20.73■□□□□ 0.91
TCHP-208ENST00000549550 ITGBL1O95965 494 aaPredicted RBP20.73■□□□□ 0.91
TCHP-208ENST00000549550 VEGFBP49765 207 aa20.73■□□□□ 0.91
TCHP-208ENST00000549550 PRDM10Q9NQV6 1147 aa20.73■□□□□ 0.91
TCHP-208ENST00000549550 NPC1L1Q9UHC9 1359 aa20.72■□□□□ 0.91
TCHP-208ENST00000549550 OLFM4Q6UX06 510 aa20.72■□□□□ 0.91
TCHP-208ENST00000549550 AIDAQ96BJ3 306 aa20.72■□□□□ 0.91
TCHP-208ENST00000549550 HACL1Q9UJ83 578 aa20.72■□□□□ 0.91
TCHP-208ENST00000549550 KLRG2A4D1S0 409 aaPredicted RBP20.71■□□□□ 0.91
TCHP-208ENST00000549550 PRKAR2BP31323 418 aa20.71■□□□□ 0.91
TCHP-208ENST00000549550 CTCFP49711 727 aaPredicted RBP20.71■□□□□ 0.91
TCHP-208ENST00000549550 CLEC11AQ9Y240 323 aa20.71■□□□□ 0.91
TCHP-208ENST00000549550 LAMB4A4D0S4 1761 aa20.71■□□□□ 0.91
TCHP-208ENST00000549550 EPHX2P34913 555 aa20.7■□□□□ 0.9
TCHP-208ENST00000549550 TPTE2Q6XPS3 522 aa20.7■□□□□ 0.9
TCHP-208ENST00000549550 RTKN2Q8IZC4 609 aa20.7■□□□□ 0.9
TCHP-208ENST00000549550 RSPH6AQ9H0K4 717 aa20.7■□□□□ 0.9
TCHP-208ENST00000549550 NIP7Q9Y221 180 aaKnown RBP eCLIP20.7■□□□□ 0.9
TCHP-208ENST00000549550 NUP98P52948 1817 aa20.69■□□□□ 0.9
TCHP-208ENST00000549550 SNRPA1P09661 255 aaKnown RBP20.69■□□□□ 0.9
TCHP-208ENST00000549550 RNF123Q5XPI4 1314 aa20.69■□□□□ 0.9
TCHP-208ENST00000549550 FAM177BA6PVY3 158 aa20.68■□□□□ 0.9
TCHP-208ENST00000549550 NBPF26B4DH59 902 aa20.68■□□□□ 0.9
TCHP-208ENST00000549550 NBPF10Q6P3W6 841 aaKnown RBP20.68■□□□□ 0.9
TCHP-208ENST00000549550 NBPF15Q8N660 670 aa20.68■□□□□ 0.9
TCHP-208ENST00000549550 IARSP41252 1262 aaKnown RBP20.67■□□□□ 0.9
TCHP-208ENST00000549550 MCM10Q7L590 875 aa20.67■□□□□ 0.9
TCHP-208ENST00000549550 PNMA8AQ86V59 439 aaPredicted RBP20.67■□□□□ 0.9
TCHP-208ENST00000549550 WBP1LQ9NX94 342 aa20.67■□□□□ 0.9
TCHP-208ENST00000549550 FZD9O00144 591 aa20.66■□□□□ 0.9
TCHP-208ENST00000549550 RGL2O15211 777 aa20.66■□□□□ 0.9
TCHP-208ENST00000549550 LBX1P52954 281 aa20.66■□□□□ 0.9
TCHP-208ENST00000549550 MAP1SQ66K74 1059 aaPredicted RBP20.66■□□□□ 0.9
TCHP-208ENST00000549550 CNTROBQ8N137 903 aa20.66■□□□□ 0.9
TCHP-208ENST00000549550 SYNE4Q8N205 404 aa20.66■□□□□ 0.9
TCHP-208ENST00000549550 RTF1Q92541 710 aaKnown RBP20.66■□□□□ 0.9
TCHP-208ENST00000549550 LTBP1Q14766 1721 aa20.65■□□□□ 0.9
TCHP-208ENST00000549550 SNED1Q8TER0 1413 aa20.65■□□□□ 0.9
TCHP-208ENST00000549550 RASSF10A6NK89 507 aa20.65■□□□□ 0.9
TCHP-208ENST00000549550 ALDH1B1P30837 517 aa20.65■□□□□ 0.9
TCHP-208ENST00000549550 GPC2Q8N158 579 aa20.65■□□□□ 0.9
TCHP-208ENST00000549550 TRPM7Q96QT4 1865 aa20.64■□□□□ 0.9
TCHP-208ENST00000549550 HLFQ16534 295 aa20.64■□□□□ 0.89
TCHP-208ENST00000549550 DEFB115Q30KQ5 88 aa20.64■□□□□ 0.89
TCHP-208ENST00000549550 CFAP53Q96M91 514 aa20.64■□□□□ 0.89
TCHP-208ENST00000549550 DLG5Q8TDM6 1919 aa20.64■□□□□ 0.89
TCHP-208ENST00000549550 COL4A5P29400 1685 aa20.64■□□□□ 0.89
TCHP-208ENST00000549550 GTF2E1P29083 439 aaPredicted RBP20.63■□□□□ 0.89
TCHP-208ENST00000549550 DCTN1Q14203 1278 aa20.62■□□□□ 0.89
TCHP-208ENST00000549550 JDP2Q8WYK2 163 aa20.62■□□□□ 0.89
TCHP-208ENST00000549550 PSMD1Q99460 953 aa20.62■□□□□ 0.89
TCHP-208ENST00000549550 THSD7BQ9C0I4 1608 aa20.62■□□□□ 0.89
TCHP-208ENST00000549550 KDM3BQ7LBC6 1761 aa20.62■□□□□ 0.89
TCHP-208ENST00000549550 ABCC12Q96J65 1359 aa20.61■□□□□ 0.89
TCHP-208ENST00000549550 WDR33Q9C0J8 1336 aaKnown RBP20.61■□□□□ 0.89
TCHP-208ENST00000549550 HSPA8P11142 646 aaKnown RBP20.61■□□□□ 0.89
TCHP-208ENST00000549550 ABT1Q9ULW3 272 aaKnown RBP20.61■□□□□ 0.89
TCHP-208ENST00000549550 NUDCQ9Y266 331 aa20.61■□□□□ 0.89
TCHP-208ENST00000549550 U2AF1L5P0DN76 240 aaPredicted RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms