RNA–Protein interactions for RNA: ENST00000548516.5

LETMD1-217, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-217ENST00000548516 PER1O15534 1290 aaPredicted RBP12.54□□□□□ -0.4
LETMD1-217ENST00000548516 SOGA3Q5TF21 947 aa12.54□□□□□ -0.4
LETMD1-217ENST00000548516 PRAMEF22A3QJZ6 481 aa12.53□□□□□ -0.4
LETMD1-217ENST00000548516 IQCA1LA6NCM1 817 aa12.53□□□□□ -0.4
LETMD1-217ENST00000548516 PRKAR2BP31323 418 aa12.53□□□□□ -0.4
LETMD1-217ENST00000548516 CCDC93Q567U6 631 aa12.53□□□□□ -0.4
LETMD1-217ENST00000548516 PHACTR3Q96KR7 559 aa12.53□□□□□ -0.4
LETMD1-217ENST00000548516 ZNF277Q9NRM2 450 aaPredicted RBP12.53□□□□□ -0.4
LETMD1-217ENST00000548516 LTBP3Q9NS15 1303 aa12.53□□□□□ -0.4
LETMD1-217ENST00000548516 NRXN2Q9P2S2 1712 aa12.53□□□□□ -0.4
LETMD1-217ENST00000548516 OLFM4Q6UX06 510 aa12.52□□□□□ -0.41
LETMD1-217ENST00000548516 LDHDQ86WU2 507 aa12.52□□□□□ -0.41
LETMD1-217ENST00000548516 TAF1DQ9H5J8 278 aaPredicted RBP12.52□□□□□ -0.41
LETMD1-217ENST00000548516 CCDC88AQ3V6T2 1871 aa12.51□□□□□ -0.41
LETMD1-217ENST00000548516 FOXN1O15353 648 aa12.51□□□□□ -0.41
LETMD1-217ENST00000548516 NPR1P16066 1061 aa12.51□□□□□ -0.41
LETMD1-217ENST00000548516 GTF2E1P29083 439 aaPredicted RBP12.51□□□□□ -0.41
LETMD1-217ENST00000548516 TPTE2Q6XPS3 522 aa12.51□□□□□ -0.41
LETMD1-217ENST00000548516 RTF1Q92541 710 aaKnown RBP12.51□□□□□ -0.41
LETMD1-217ENST00000548516 AIDAQ96BJ3 306 aa12.51□□□□□ -0.41
LETMD1-217ENST00000548516 NIP7Q9Y221 180 aaKnown RBP eCLIP12.51□□□□□ -0.41
LETMD1-217ENST00000548516 ZNF652Q9Y2D9 606 aa12.51□□□□□ -0.41
LETMD1-217ENST00000548516 SNRPA1P09661 255 aaKnown RBP12.5□□□□□ -0.41
LETMD1-217ENST00000548516 FKBP4Q02790 459 aaKnown RBP eCLIP12.5□□□□□ -0.41
LETMD1-217ENST00000548516 MCM10Q7L590 875 aa12.5□□□□□ -0.41
LETMD1-217ENST00000548516 NGEFQ8N5V2 710 aa12.5□□□□□ -0.41
LETMD1-217ENST00000548516 C7orf43Q8WVR3 580 aa12.5□□□□□ -0.41
LETMD1-217ENST00000548516 CFAP53Q96M91 514 aa12.5□□□□□ -0.41
LETMD1-217ENST00000548516 HACL1Q9UJ83 578 aa12.5□□□□□ -0.41
LETMD1-217ENST00000548516 TIAM2Q8IVF5 1701 aa12.5□□□□□ -0.41
LETMD1-217ENST00000548516 DLEC1Q9Y238 1755 aa12.49□□□□□ -0.41
LETMD1-217ENST00000548516 ZNF541Q9H0D2 1346 aa12.49□□□□□ -0.41
LETMD1-217ENST00000548516 TMEM88BA6NKF7 163 aa12.49□□□□□ -0.41
LETMD1-217ENST00000548516 U2AF1L5P0DN76 240 aaPredicted RBP12.49□□□□□ -0.41
LETMD1-217ENST00000548516 VEGFBP49765 207 aa12.49□□□□□ -0.41
LETMD1-217ENST00000548516 U2AF1Q01081 240 aaKnown RBP eCLIP12.49□□□□□ -0.41
LETMD1-217ENST00000548516 DCTN1Q14203 1278 aa12.49□□□□□ -0.41
LETMD1-217ENST00000548516 CLEC4GQ6UXB4 293 aa12.49□□□□□ -0.41
LETMD1-217ENST00000548516 SYNE4Q8N205 404 aa12.49□□□□□ -0.41
LETMD1-217ENST00000548516 NUDCQ9Y266 331 aa12.49□□□□□ -0.41
LETMD1-217ENST00000548516 VIRMAQ69YN4 1812 aaKnown RBP12.48□□□□□ -0.41
LETMD1-217ENST00000548516 CNTNAP1P78357 1384 aa12.48□□□□□ -0.41
LETMD1-217ENST00000548516 PASKQ96RG2 1323 aa12.48□□□□□ -0.41
LETMD1-217ENST00000548516 EPHX2P34913 555 aa12.48□□□□□ -0.41
LETMD1-217ENST00000548516 RTKN2Q8IZC4 609 aa12.48□□□□□ -0.41
LETMD1-217ENST00000548516 L3MBTL3Q96JM7 780 aaPredicted RBP12.48□□□□□ -0.41
LETMD1-217ENST00000548516 RSPH6AQ9H0K4 717 aa12.48□□□□□ -0.41
LETMD1-217ENST00000548516 MIS18AQ9NYP9 233 aa12.48□□□□□ -0.41
LETMD1-217ENST00000548516 GJA3Q9Y6H8 435 aa12.48□□□□□ -0.41
LETMD1-217ENST00000548516 ANKRD31Q8N7Z5 1873 aa12.48□□□□□ -0.41
LETMD1-217ENST00000548516 SLX4Q8IY92 1834 aa12.48□□□□□ -0.41
LETMD1-217ENST00000548516 RNF123Q5XPI4 1314 aa12.47□□□□□ -0.41
LETMD1-217ENST00000548516 NBPF26B4DH59 902 aa12.47□□□□□ -0.41
LETMD1-217ENST00000548516 ITGBL1O95965 494 aaPredicted RBP12.47□□□□□ -0.41
LETMD1-217ENST00000548516 ALDH1B1P30837 517 aa12.47□□□□□ -0.41
LETMD1-217ENST00000548516 IARSP41252 1262 aaKnown RBP12.47□□□□□ -0.41
LETMD1-217ENST00000548516 CTCFP49711 727 aaPredicted RBP12.47□□□□□ -0.41
LETMD1-217ENST00000548516 HLFQ16534 295 aa12.47□□□□□ -0.41
LETMD1-217ENST00000548516 MAP1SQ66K74 1059 aaPredicted RBP12.47□□□□□ -0.41
LETMD1-217ENST00000548516 NBPF10Q6P3W6 841 aaKnown RBP12.47□□□□□ -0.41
LETMD1-217ENST00000548516 CNTROBQ8N137 903 aa12.47□□□□□ -0.41
LETMD1-217ENST00000548516 NBPF15Q8N660 670 aa12.47□□□□□ -0.41
LETMD1-217ENST00000548516 UBR2Q8IWV8 1755 aa12.46□□□□□ -0.41
LETMD1-217ENST00000548516 CEMIPQ8WUJ3 1361 aa12.46□□□□□ -0.41
LETMD1-217ENST00000548516 NPC1L1Q9UHC9 1359 aa12.46□□□□□ -0.41
LETMD1-217ENST00000548516 COL11A2P13942 1736 aaPredicted RBP12.46□□□□□ -0.41
LETMD1-217ENST00000548516 TCERG1O14776 1098 aaKnown RBP12.46□□□□□ -0.41
LETMD1-217ENST00000548516 LBX1P52954 281 aa12.46□□□□□ -0.41
LETMD1-217ENST00000548516 DEFB115Q30KQ5 88 aa12.46□□□□□ -0.41
LETMD1-217ENST00000548516 JDP2Q8WYK2 163 aa12.46□□□□□ -0.41
LETMD1-217ENST00000548516 PRDM10Q9NQV6 1147 aa12.46□□□□□ -0.41
LETMD1-217ENST00000548516 ABT1Q9ULW3 272 aaKnown RBP12.46□□□□□ -0.41
LETMD1-217ENST00000548516 COL3A1P02461 1466 aaPredicted RBP12.46□□□□□ -0.42
LETMD1-217ENST00000548516 FER1L6Q2WGJ9 1857 aa12.45□□□□□ -0.42
LETMD1-217ENST00000548516 GRM1Q13255 1194 aa12.45□□□□□ -0.42
LETMD1-217ENST00000548516 PAXIP1Q6ZW49 1069 aaPredicted RBP12.45□□□□□ -0.42
LETMD1-217ENST00000548516 PNMA8AQ86V59 439 aaPredicted RBP12.45□□□□□ -0.42
LETMD1-217ENST00000548516 NUTM1Q86Y26 1132 aa12.45□□□□□ -0.42
LETMD1-217ENST00000548516 KLRG2A4D1S0 409 aaPredicted RBP12.44□□□□□ -0.42
LETMD1-217ENST00000548516 EIF6P56537 245 aaKnown RBP12.44□□□□□ -0.42
LETMD1-217ENST00000548516 TAF7Q15545 349 aaPredicted RBP12.44□□□□□ -0.42
LETMD1-217ENST00000548516 WBP1LQ9NX94 342 aa12.44□□□□□ -0.42
LETMD1-217ENST00000548516 RRP7AQ9Y3A4 280 aaKnown RBP12.44□□□□□ -0.42
LETMD1-217ENST00000548516 SCN7AQ01118 1682 aa12.44□□□□□ -0.42
LETMD1-217ENST00000548516 FZD9O00144 591 aa12.43□□□□□ -0.42
LETMD1-217ENST00000548516 GPTP24298 496 aa12.43□□□□□ -0.42
LETMD1-217ENST00000548516 LMOD1P29536 600 aaPredicted RBP12.43□□□□□ -0.42
LETMD1-217ENST00000548516 GPC2Q8N158 579 aa12.43□□□□□ -0.42
LETMD1-217ENST00000548516 RPGRQ92834 1020 aaKnown RBP12.43□□□□□ -0.42
LETMD1-217ENST00000548516 MYL6BP14649 208 aa12.42□□□□□ -0.42
LETMD1-217ENST00000548516 FMR1Q06787 632 aaKnown RBP eCLIP12.42□□□□□ -0.42
LETMD1-217ENST00000548516 LARGE2Q8N3Y3 721 aa12.42□□□□□ -0.42
LETMD1-217ENST00000548516 NYXQ9GZU5 481 aa12.42□□□□□ -0.42
LETMD1-217ENST00000548516 DICER1Q9UPY3 1922 aaKnown RBP12.42□□□□□ -0.42
LETMD1-217ENST00000548516 WDR33Q9C0J8 1336 aaKnown RBP12.41□□□□□ -0.42
LETMD1-217ENST00000548516 RASSF10A6NK89 507 aa12.41□□□□□ -0.42
LETMD1-217ENST00000548516 PPP2R1AP30153 589 aa12.41□□□□□ -0.42
LETMD1-217ENST00000548516 CACNA1SQ13698 1873 aa12.41□□□□□ -0.42
LETMD1-217ENST00000548516 KIF6Q6ZMV9 814 aa12.41□□□□□ -0.42
LETMD1-217ENST00000548516 TTLL7Q6ZT98 887 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms