RNA–Protein interactions for RNA: ENST00000548177.5

CALCOCO1-209, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-209ENST00000548177 ZNF496Q96IT1 587 aaPredicted RBP13.79□□□□□ -0.2
CALCOCO1-209ENST00000548177 HACL1Q9UJ83 578 aa13.79□□□□□ -0.2
CALCOCO1-209ENST00000548177 ABT1Q9ULW3 272 aaKnown RBP13.79□□□□□ -0.2
CALCOCO1-209ENST00000548177 KNSTRNQ9Y448 316 aa13.79□□□□□ -0.2
CALCOCO1-209ENST00000548177 MRC1P22897 1456 aa13.79□□□□□ -0.2
CALCOCO1-209ENST00000548177 CCDC85CA6NKD9 419 aa13.78□□□□□ -0.2
CALCOCO1-209ENST00000548177 A1BGP04217 495 aa13.78□□□□□ -0.2
CALCOCO1-209ENST00000548177 HSPA8P11142 646 aaKnown RBP13.78□□□□□ -0.2
CALCOCO1-209ENST00000548177 EPHX2P34913 555 aa13.78□□□□□ -0.2
CALCOCO1-209ENST00000548177 TEFQ10587 303 aa13.78□□□□□ -0.2
CALCOCO1-209ENST00000548177 CCDC93Q567U6 631 aa13.78□□□□□ -0.2
CALCOCO1-209ENST00000548177 CNTROBQ8N137 903 aa13.78□□□□□ -0.2
CALCOCO1-209ENST00000548177 L3MBTL3Q96JM7 780 aaPredicted RBP13.78□□□□□ -0.2
CALCOCO1-209ENST00000548177 TEX13AQ9BXU3 409 aaPredicted RBP13.78□□□□□ -0.2
CALCOCO1-209ENST00000548177 ZNF277Q9NRM2 450 aaPredicted RBP13.78□□□□□ -0.2
CALCOCO1-209ENST00000548177 ARFGEF2Q9Y6D5 1785 aa13.78□□□□□ -0.2
CALCOCO1-209ENST00000548177 IL6STP40189 918 aaPredicted RBP13.77□□□□□ -0.21
CALCOCO1-209ENST00000548177 SCN7AQ01118 1682 aa13.77□□□□□ -0.21
CALCOCO1-209ENST00000548177 MAP2K1Q02750 393 aaPredicted RBP13.77□□□□□ -0.21
CALCOCO1-209ENST00000548177 GRM1Q13255 1194 aa13.77□□□□□ -0.21
CALCOCO1-209ENST00000548177 PAXIP1Q6ZW49 1069 aaPredicted RBP13.77□□□□□ -0.21
CALCOCO1-209ENST00000548177 WDR33Q9C0J8 1336 aaKnown RBP13.77□□□□□ -0.21
CALCOCO1-209ENST00000548177 ZNF541Q9H0D2 1346 aa13.77□□□□□ -0.21
CALCOCO1-209ENST00000548177 HEG1Q9ULI3 1381 aa13.76□□□□□ -0.21
CALCOCO1-209ENST00000548177 RNF123Q5XPI4 1314 aa13.76□□□□□ -0.21
CALCOCO1-209ENST00000548177 CAMTA2O94983 1202 aa13.76□□□□□ -0.21
CALCOCO1-209ENST00000548177 ZNF790Q6PG37 636 aa13.76□□□□□ -0.21
CALCOCO1-209ENST00000548177 OLFM4Q6UX06 510 aa13.76□□□□□ -0.21
CALCOCO1-209ENST00000548177 PNMA8AQ86V59 439 aaPredicted RBP13.76□□□□□ -0.21
CALCOCO1-209ENST00000548177 NBPF5PQ86XG9 351 aaPredicted RBP13.76□□□□□ -0.21
CALCOCO1-209ENST00000548177 DZIP3Q86Y13 1208 aaKnown RBP13.76□□□□□ -0.21
CALCOCO1-209ENST00000548177 RASSF10A6NK89 507 aa13.75□□□□□ -0.21
CALCOCO1-209ENST00000548177 PIP4K2AP48426 406 aaPredicted RBP13.75□□□□□ -0.21
CALCOCO1-209ENST00000548177 EIF4G2P78344 907 aaKnown RBP eCLIP13.75□□□□□ -0.21
CALCOCO1-209ENST00000548177 FKBP4Q02790 459 aaKnown RBP eCLIP13.75□□□□□ -0.21
CALCOCO1-209ENST00000548177 MLLT1Q03111 559 aaPredicted RBP13.75□□□□□ -0.21
CALCOCO1-209ENST00000548177 C7orf43Q8WVR3 580 aa13.75□□□□□ -0.21
CALCOCO1-209ENST00000548177 BEGAINQ9BUH8 593 aa13.75□□□□□ -0.21
CALCOCO1-209ENST00000548177 FAM177BA6PVY3 158 aa13.74□□□□□ -0.21
CALCOCO1-209ENST00000548177 DIAPH1O60610 1272 aaKnown RBP13.74□□□□□ -0.21
CALCOCO1-209ENST00000548177 HSPA5P11021 654 aaKnown RBP13.74□□□□□ -0.21
CALCOCO1-209ENST00000548177 NPR1P16066 1061 aa13.74□□□□□ -0.21
CALCOCO1-209ENST00000548177 IL17REQ8NFR9 667 aa13.74□□□□□ -0.21
CALCOCO1-209ENST00000548177 CFAP44Q96MT7 982 aa13.74□□□□□ -0.21
CALCOCO1-209ENST00000548177 FMNL2Q96PY5 1086 aa13.74□□□□□ -0.21
CALCOCO1-209ENST00000548177 GJA3Q9Y6H8 435 aa13.73□□□□□ -0.21
CALCOCO1-209ENST00000548177 GNAT3A8MTJ3 354 aa13.72□□□□□ -0.21
CALCOCO1-209ENST00000548177 IARSP41252 1262 aaKnown RBP13.72□□□□□ -0.21
CALCOCO1-209ENST00000548177 RTKN2Q8IZC4 609 aa13.72□□□□□ -0.21
CALCOCO1-209ENST00000548177 SYNE4Q8N205 404 aa13.72□□□□□ -0.21
CALCOCO1-209ENST00000548177 TIMELESSQ9UNS1 1208 aa13.72□□□□□ -0.21
CALCOCO1-209ENST00000548177 BCORQ6W2J9 1755 aa13.71□□□□□ -0.21
CALCOCO1-209ENST00000548177 ADAMTSL1Q8N6G6 1762 aa13.71□□□□□ -0.21
CALCOCO1-209ENST00000548177 U2SURPO15042 1029 aaKnown RBP13.71□□□□□ -0.21
CALCOCO1-209ENST00000548177 KCNQ3O43525 872 aa13.71□□□□□ -0.21
CALCOCO1-209ENST00000548177 GTF2E1P29083 439 aaPredicted RBP13.71□□□□□ -0.21
CALCOCO1-209ENST00000548177 FMR1Q06787 632 aaKnown RBP eCLIP13.71□□□□□ -0.21
CALCOCO1-209ENST00000548177 CNGB1Q14028 1251 aaPredicted RBP13.71□□□□□ -0.21
CALCOCO1-209ENST00000548177 TPTE2Q6XPS3 522 aa13.71□□□□□ -0.21
CALCOCO1-209ENST00000548177 GPC2Q8N158 579 aa13.71□□□□□ -0.21
CALCOCO1-209ENST00000548177 JDP2Q8WYK2 163 aa13.71□□□□□ -0.21
CALCOCO1-209ENST00000548177 CAPNS2Q96L46 248 aa13.71□□□□□ -0.21
CALCOCO1-209ENST00000548177 DDX21Q9NR30 783 aaKnown RBP eCLIP13.71□□□□□ -0.21
CALCOCO1-209ENST00000548177 TSKSQ9UJT2 592 aa13.71□□□□□ -0.21
CALCOCO1-209ENST00000548177 USP16Q9Y5T5 823 aa13.71□□□□□ -0.21
CALCOCO1-209ENST00000548177 CASP8AP2Q9UKL3 1982 aa13.71□□□□□ -0.22
CALCOCO1-209ENST00000548177 SIPA1L3O60292 1781 aaPredicted RBP13.71□□□□□ -0.22
CALCOCO1-209ENST00000548177 TRPM7Q96QT4 1865 aa13.7□□□□□ -0.22
CALCOCO1-209ENST00000548177 BTBD11A6QL63 1104 aa13.7□□□□□ -0.22
CALCOCO1-209ENST00000548177 FZD9O00144 591 aa13.7□□□□□ -0.22
CALCOCO1-209ENST00000548177 ECE1P42892 770 aa13.7□□□□□ -0.22
CALCOCO1-209ENST00000548177 CYP4F22Q6NT55 531 aa13.7□□□□□ -0.22
CALCOCO1-209ENST00000548177 GPR101Q96P66 508 aaPredicted RBP13.7□□□□□ -0.22
CALCOCO1-209ENST00000548177 NIP7Q9Y221 180 aaKnown RBP eCLIP13.7□□□□□ -0.22
CALCOCO1-209ENST00000548177 ZNF652Q9Y2D9 606 aa13.7□□□□□ -0.22
CALCOCO1-209ENST00000548177 LMOD1P29536 600 aaPredicted RBP13.69□□□□□ -0.22
CALCOCO1-209ENST00000548177 ALDH1B1P30837 517 aa13.69□□□□□ -0.22
CALCOCO1-209ENST00000548177 EIF6P56537 245 aaKnown RBP13.69□□□□□ -0.22
CALCOCO1-209ENST00000548177 AMER1Q5JTC6 1135 aaPredicted RBP13.69□□□□□ -0.22
CALCOCO1-209ENST00000548177 CLEC4GQ6UXB4 293 aa13.69□□□□□ -0.22
CALCOCO1-209ENST00000548177 GAS2L2Q8NHY3 880 aa13.69□□□□□ -0.22
CALCOCO1-209ENST00000548177 PRAMEF22A3QJZ6 481 aa13.68□□□□□ -0.22
CALCOCO1-209ENST00000548177 CC2D1BQ5T0F9 858 aaKnown RBP13.68□□□□□ -0.22
CALCOCO1-209ENST00000548177 TRAF5O00463 557 aa13.67□□□□□ -0.22
CALCOCO1-209ENST00000548177 EPS15P42566 896 aa13.67□□□□□ -0.22
CALCOCO1-209ENST00000548177 KLRG2A4D1S0 409 aaPredicted RBP13.66□□□□□ -0.22
CALCOCO1-209ENST00000548177 TCERG1O14776 1098 aaKnown RBP13.66□□□□□ -0.22
CALCOCO1-209ENST00000548177 AOC2O75106 756 aa13.66□□□□□ -0.22
CALCOCO1-209ENST00000548177 RGS19P49795 217 aa13.66□□□□□ -0.22
CALCOCO1-209ENST00000548177 CST9Q5W186 159 aa13.66□□□□□ -0.22
CALCOCO1-209ENST00000548177 SNRPA1P09661 255 aaKnown RBP13.65□□□□□ -0.22
CALCOCO1-209ENST00000548177 LARGE2Q8N3Y3 721 aa13.65□□□□□ -0.22
CALCOCO1-209ENST00000548177 PCGF6Q9BYE7 350 aa13.65□□□□□ -0.22
CALCOCO1-209ENST00000548177 LTBP1Q14766 1721 aa13.64□□□□□ -0.23
CALCOCO1-209ENST00000548177 HLFQ16534 295 aa13.64□□□□□ -0.23
CALCOCO1-209ENST00000548177 NGEFQ8N5V2 710 aa13.64□□□□□ -0.23
CALCOCO1-209ENST00000548177 PSMD1Q99460 953 aa13.64□□□□□ -0.23
CALCOCO1-209ENST00000548177 PCDH10Q9P2E7 1040 aa13.64□□□□□ -0.23
CALCOCO1-209ENST00000548177 NBPF26B4DH59 902 aa13.63□□□□□ -0.23
CALCOCO1-209ENST00000548177 MAP2K2P36507 400 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms