RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 SCHIP1Q9P0W5 487 aaPredicted RBP8.27□□□□□ -1.09
SCAF11-210ENST00000547654 EFSO43281 561 aa8.26□□□□□ -1.09
SCAF11-210ENST00000547654 PRRT3Q5FWE3 981 aa8.26□□□□□ -1.09
SCAF11-210ENST00000547654 LRRC69Q6ZNQ3 347 aa8.26□□□□□ -1.09
SCAF11-210ENST00000547654 SYT9Q86SS6 491 aa8.26□□□□□ -1.09
SCAF11-210ENST00000547654 L3MBTL2Q969R5 705 aa8.26□□□□□ -1.09
SCAF11-210ENST00000547654 CLUAP1Q96AJ1 413 aa8.26□□□□□ -1.09
SCAF11-210ENST00000547654 UCN2Q96RP3 112 aa8.26□□□□□ -1.09
SCAF11-210ENST00000547654 SEMA6BQ9H3T3 888 aa8.26□□□□□ -1.09
SCAF11-210ENST00000547654 ZNF358Q9NW07 568 aa8.26□□□□□ -1.09
SCAF11-210ENST00000547654 ZNF232Q9UNY5 417 aa8.26□□□□□ -1.09
SCAF11-210ENST00000547654 GATA4P43694 442 aa8.25□□□□□ -1.09
SCAF11-210ENST00000547654 KRTAP19-1Q8IUB9 90 aa8.25□□□□□ -1.09
SCAF11-210ENST00000547654 LZTS3O60299 673 aaPredicted RBP8.24□□□□□ -1.09
SCAF11-210ENST00000547654 APBA3O96018 575 aa8.24□□□□□ -1.09
SCAF11-210ENST00000547654 NCOA4Q13772 614 aa8.24□□□□□ -1.09
SCAF11-210ENST00000547654 WWC1Q8IX03 1113 aa8.24□□□□□ -1.09
SCAF11-210ENST00000547654 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.24□□□□□ -1.09
SCAF11-210ENST00000547654 ZDHHC1Q8WTX9 485 aa8.24□□□□□ -1.09
SCAF11-210ENST00000547654 TIMELESSQ9UNS1 1208 aa8.24□□□□□ -1.09
SCAF11-210ENST00000547654 GPC6Q9Y625 555 aaPredicted RBP8.24□□□□□ -1.09
SCAF11-210ENST00000547654 A6NJR5 290 aa8.23□□□□□ -1.09
SCAF11-210ENST00000547654 NEUROD1Q13562 356 aa8.23□□□□□ -1.09
SCAF11-210ENST00000547654 TEAD4Q15561 434 aa8.23□□□□□ -1.09
SCAF11-210ENST00000547654 ERICH6Q7L0X2 663 aa8.23□□□□□ -1.09
SCAF11-210ENST00000547654 SLC9A9Q8IVB4 645 aa8.23□□□□□ -1.09
SCAF11-210ENST00000547654 NFATC2IPQ8NCF5 419 aa8.23□□□□□ -1.09
SCAF11-210ENST00000547654 SIN3BO75182 1162 aa8.22□□□□□ -1.09
SCAF11-210ENST00000547654 UBTFP17480 764 aaKnown RBP8.22□□□□□ -1.09
SCAF11-210ENST00000547654 NOS2P35228 1153 aa8.22□□□□□ -1.09
SCAF11-210ENST00000547654 TBCELQ5QJ74 424 aa8.22□□□□□ -1.09
SCAF11-210ENST00000547654 RHPN1Q8TCX5 695 aa8.22□□□□□ -1.09
SCAF11-210ENST00000547654 SERTM1A2A2V5 107 aa8.21□□□□□ -1.1
SCAF11-210ENST00000547654 USP17L5A8MUK1 530 aa8.21□□□□□ -1.1
SCAF11-210ENST00000547654 TRIM50Q86XT4 487 aa8.21□□□□□ -1.1
SCAF11-210ENST00000547654 DEPDC4Q8N2C3 294 aa8.21□□□□□ -1.1
SCAF11-210ENST00000547654 CHMP3Q9Y3E7 222 aa8.21□□□□□ -1.1
SCAF11-210ENST00000547654 M0R082 166 aa8.2□□□□□ -1.1
SCAF11-210ENST00000547654 EML1O00423 815 aa8.2□□□□□ -1.1
SCAF11-210ENST00000547654 ITGB7P26010 798 aa8.2□□□□□ -1.1
SCAF11-210ENST00000547654 ZMYM1Q5SVZ6 1142 aa8.2□□□□□ -1.1
SCAF11-210ENST00000547654 ZNF417Q8TAU3 575 aa8.2□□□□□ -1.1
SCAF11-210ENST00000547654 ZNF587Q96SQ5 575 aaPredicted RBP8.2□□□□□ -1.1
SCAF11-210ENST00000547654 ADARB2-AS1A8MUL3 147 aa8.19□□□□□ -1.1
SCAF11-210ENST00000547654 EPHA4P54764 986 aa8.19□□□□□ -1.1
SCAF11-210ENST00000547654 SPEM2Q0P670 501 aa8.19□□□□□ -1.1
SCAF11-210ENST00000547654 TNS4Q8IZW8 715 aa8.19□□□□□ -1.1
SCAF11-210ENST00000547654 FAM229AH3BQW9 127 aa8.18□□□□□ -1.1
SCAF11-210ENST00000547654 DKK1O94907 266 aa8.18□□□□□ -1.1
SCAF11-210ENST00000547654 ADH7P40394 386 aa8.18□□□□□ -1.1
SCAF11-210ENST00000547654 SFSWAPQ12872 951 aaKnown RBP8.18□□□□□ -1.1
SCAF11-210ENST00000547654 SH3PXD2AQ5TCZ1 1133 aa8.18□□□□□ -1.1
SCAF11-210ENST00000547654 RAB44Q7Z6P3 723 aaPredicted RBP8.18□□□□□ -1.1
SCAF11-210ENST00000547654 TPCN2Q8NHX9 752 aa8.18□□□□□ -1.1
SCAF11-210ENST00000547654 NACC1Q96RE7 527 aa8.18□□□□□ -1.1
SCAF11-210ENST00000547654 SLC30A3Q99726 388 aa8.18□□□□□ -1.1
SCAF11-210ENST00000547654 MDFIQ99750 246 aa8.18□□□□□ -1.1
SCAF11-210ENST00000547654 GTF3C3Q9Y5Q9 886 aa8.18□□□□□ -1.1
SCAF11-210ENST00000547654 SCO2A0A1W2PP80 73 aa8.17□□□□□ -1.1
SCAF11-210ENST00000547654 ALBP02768 609 aa8.17□□□□□ -1.1
SCAF11-210ENST00000547654 ATP1A2P50993 1020 aa8.17□□□□□ -1.1
SCAF11-210ENST00000547654 PSMA6P60900 246 aaKnown RBP8.17□□□□□ -1.1
SCAF11-210ENST00000547654 PROSER2Q86WR7 435 aaPredicted RBP8.17□□□□□ -1.1
SCAF11-210ENST00000547654 TNFRSF25Q93038 417 aa8.17□□□□□ -1.1
SCAF11-210ENST00000547654 CEP63Q96MT8 703 aa8.17□□□□□ -1.1
SCAF11-210ENST00000547654 TRIM28Q13263 835 aaKnown RBP8.16□□□□□ -1.1
SCAF11-210ENST00000547654 HDGFL1Q5TGJ6 251 aa8.16□□□□□ -1.1
SCAF11-210ENST00000547654 ARXQ96QS3 562 aa8.16□□□□□ -1.1
SCAF11-210ENST00000547654 BRD7Q9NPI1 651 aa8.16□□□□□ -1.1
SCAF11-210ENST00000547654 PRDM6Q9NQX0 595 aa8.16□□□□□ -1.1
SCAF11-210ENST00000547654 ANKIB1Q9P2G1 1089 aa8.16□□□□□ -1.1
SCAF11-210ENST00000547654 ZBTB7BO15156 539 aaPredicted RBP8.15□□□□□ -1.1
SCAF11-210ENST00000547654 RAD21O60216 631 aa8.15□□□□□ -1.1
SCAF11-210ENST00000547654 PLEKHM2Q8IWE5 1019 aa8.15□□□□□ -1.1
SCAF11-210ENST00000547654 HSH2DQ96JZ2 352 aa8.15□□□□□ -1.1
SCAF11-210ENST00000547654 KRTAP4-7Q9BYR0 210 aa8.15□□□□□ -1.1
SCAF11-210ENST00000547654 TPSG1Q9NRR2 321 aa8.15□□□□□ -1.1
SCAF11-210ENST00000547654 USP17L3A6NCW0 530 aa8.14□□□□□ -1.11
SCAF11-210ENST00000547654 USP17L4A6NCW7 530 aa8.14□□□□□ -1.11
SCAF11-210ENST00000547654 RSPO4Q2I0M5 234 aaPredicted RBP8.14□□□□□ -1.11
SCAF11-210ENST00000547654 C1orf53Q5VUE5 145 aa8.14□□□□□ -1.11
SCAF11-210ENST00000547654 USP17L2Q6R6M4 530 aa8.14□□□□□ -1.11
SCAF11-210ENST00000547654 USP17L1Q7RTZ2 530 aa8.14□□□□□ -1.11
SCAF11-210ENST00000547654 MICALL1Q8N3F8 863 aa8.14□□□□□ -1.11
SCAF11-210ENST00000547654 PHACTR1Q9C0D0 580 aa8.14□□□□□ -1.11
SCAF11-210ENST00000547654 TSPAN10Q9H1Z9 355 aaPredicted RBP8.14□□□□□ -1.11
SCAF11-210ENST00000547654 STARD13Q9Y3M8 1113 aa8.14□□□□□ -1.11
SCAF11-210ENST00000547654 TBC1D8BQ0IIM8 1120 aa8.13□□□□□ -1.11
SCAF11-210ENST00000547654 CCDC102BQ68D86 513 aa8.13□□□□□ -1.11
SCAF11-210ENST00000547654 C8orf86Q6ZUL3 223 aa8.13□□□□□ -1.11
SCAF11-210ENST00000547654 KIAA1024Q9UPX6 916 aa8.13□□□□□ -1.11
SCAF11-210ENST00000547654 KCNH4Q9UQ05 1017 aa8.13□□□□□ -1.11
SCAF11-210ENST00000547654 HCN4Q9Y3Q4 1203 aa8.13□□□□□ -1.11
SCAF11-210ENST00000547654 SFI1A8K8P3 1242 aa8.12□□□□□ -1.11
SCAF11-210ENST00000547654 HIRAP54198 1017 aaPredicted RBP8.12□□□□□ -1.11
SCAF11-210ENST00000547654 TYRO3Q06418 890 aa8.12□□□□□ -1.11
SCAF11-210ENST00000547654 C7orf43Q8WVR3 580 aa8.12□□□□□ -1.11
SCAF11-210ENST00000547654 RBM19Q9Y4C8 960 aaKnown RBP8.12□□□□□ -1.11
SCAF11-210ENST00000547654 DYRK3O43781 588 aa8.11□□□□□ -1.11
SCAF11-210ENST00000547654 LILRB5O75023 590 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms