RNA–Protein interactions for RNA: ENST00000547441.1

PRKD1-206, Transcript of protein kinase D1, humanhuman

TSL 3

Gene PRKD1, Length 547 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-206ENST00000547441 H0YIN7 160 aa13□□□□□ -0.33
PRKD1-206ENST00000547441 HMOX1P09601 288 aa13□□□□□ -0.33
PRKD1-206ENST00000547441 FER1L6Q2WGJ9 1857 aa12.99□□□□□ -0.33
PRKD1-206ENST00000547441 U2SURPO15042 1029 aaKnown RBP12.99□□□□□ -0.33
PRKD1-206ENST00000547441 DDX10Q13206 875 aaKnown RBP12.99□□□□□ -0.33
PRKD1-206ENST00000547441 GSE1Q14687 1217 aa12.99□□□□□ -0.33
PRKD1-206ENST00000547441 DPY19L2Q6NUT2 758 aa12.99□□□□□ -0.33
PRKD1-206ENST00000547441 ANKRD31Q8N7Z5 1873 aa12.99□□□□□ -0.33
PRKD1-206ENST00000547441 SLC39A6Q13433 755 aa12.98□□□□□ -0.33
PRKD1-206ENST00000547441 VSIG10Q8N0Z9 540 aa12.98□□□□□ -0.33
PRKD1-206ENST00000547441 LGR6Q9HBX8 967 aa12.98□□□□□ -0.33
PRKD1-206ENST00000547441 UBR2Q8IWV8 1755 aa12.98□□□□□ -0.33
PRKD1-206ENST00000547441 COL11A2P13942 1736 aaPredicted RBP12.98□□□□□ -0.33
PRKD1-206ENST00000547441 SCN7AQ01118 1682 aa12.97□□□□□ -0.33
PRKD1-206ENST00000547441 CHADLQ6NUI6 762 aa12.97□□□□□ -0.33
PRKD1-206ENST00000547441 GAS2L2Q8NHY3 880 aa12.97□□□□□ -0.33
PRKD1-206ENST00000547441 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.97□□□□□ -0.33
PRKD1-206ENST00000547441 PDZRN3Q9UPQ7 1066 aa12.97□□□□□ -0.33
PRKD1-206ENST00000547441 LTBP3Q9NS15 1303 aa12.96□□□□□ -0.33
PRKD1-206ENST00000547441 PITPNM1O00562 1244 aa12.96□□□□□ -0.33
PRKD1-206ENST00000547441 RNMTO43148 476 aaKnown RBP12.96□□□□□ -0.33
PRKD1-206ENST00000547441 MNX1P50219 401 aaPredicted RBP12.96□□□□□ -0.33
PRKD1-206ENST00000547441 MTHFSDQ2M296 383 aaKnown RBP12.96□□□□□ -0.33
PRKD1-206ENST00000547441 ERFEQ4G0M1 354 aa12.96□□□□□ -0.33
PRKD1-206ENST00000547441 MKRN1Q9UHC7 482 aaKnown RBP12.96□□□□□ -0.33
PRKD1-206ENST00000547441 C21orf2O43822 256 aa12.95□□□□□ -0.34
PRKD1-206ENST00000547441 CANXP27824 592 aaKnown RBP12.95□□□□□ -0.34
PRKD1-206ENST00000547441 PDE6BP35913 854 aa12.95□□□□□ -0.34
PRKD1-206ENST00000547441 EIF5P55010 431 aaKnown RBP12.95□□□□□ -0.34
PRKD1-206ENST00000547441 BICDL1Q6ZP65 573 aa12.95□□□□□ -0.34
PRKD1-206ENST00000547441 ZNF622Q969S3 477 aaKnown RBP eCLIP12.95□□□□□ -0.34
PRKD1-206ENST00000547441 BRIP1Q9BX63 1249 aa12.95□□□□□ -0.34
PRKD1-206ENST00000547441 RSPH6AQ9H0K4 717 aa12.95□□□□□ -0.34
PRKD1-206ENST00000547441 CNTNAP1P78357 1384 aa12.94□□□□□ -0.34
PRKD1-206ENST00000547441 A0A087WZG4 1122 aa12.94□□□□□ -0.34
PRKD1-206ENST00000547441 FOXN1O15353 648 aa12.94□□□□□ -0.34
PRKD1-206ENST00000547441 STARD3NLO95772 234 aa12.94□□□□□ -0.34
PRKD1-206ENST00000547441 POTEIP0CG38 1075 aa12.94□□□□□ -0.34
PRKD1-206ENST00000547441 POTEJP0CG39 1038 aa12.94□□□□□ -0.34
PRKD1-206ENST00000547441 U2AF1L5P0DN76 240 aaPredicted RBP12.94□□□□□ -0.34
PRKD1-206ENST00000547441 U2AF1Q01081 240 aaKnown RBP eCLIP12.94□□□□□ -0.34
PRKD1-206ENST00000547441 TBC1D9BQ66K14 1250 aa12.94□□□□□ -0.34
PRKD1-206ENST00000547441 TAOK3Q9H2K8 898 aa12.94□□□□□ -0.34
PRKD1-206ENST00000547441 PNNQ9H307 717 aaKnown RBP12.94□□□□□ -0.34
PRKD1-206ENST00000547441 PRKAR2BP31323 418 aa12.93□□□□□ -0.34
PRKD1-206ENST00000547441 PRR5LQ6MZQ0 368 aa12.93□□□□□ -0.34
PRKD1-206ENST00000547441 PRDM10Q9NQV6 1147 aa12.93□□□□□ -0.34
PRKD1-206ENST00000547441 ARFGEF2Q9Y6D5 1785 aa12.93□□□□□ -0.34
PRKD1-206ENST00000547441 SLX4Q8IY92 1834 aa12.92□□□□□ -0.34
PRKD1-206ENST00000547441 PASKQ96RG2 1323 aa12.92□□□□□ -0.34
PRKD1-206ENST00000547441 MYBBP1AQ9BQG0 1328 aaKnown RBP12.92□□□□□ -0.34
PRKD1-206ENST00000547441 GNAT3A8MTJ3 354 aa12.92□□□□□ -0.34
PRKD1-206ENST00000547441 DDNO94850 711 aaPredicted RBP12.92□□□□□ -0.34
PRKD1-206ENST00000547441 CACNA1SQ13698 1873 aa12.92□□□□□ -0.34
PRKD1-206ENST00000547441 SCN4AP35499 1836 aa12.92□□□□□ -0.34
PRKD1-206ENST00000547441 IQCA1LA6NCM1 817 aa12.91□□□□□ -0.34
PRKD1-206ENST00000547441 NEFMP07197 916 aa12.91□□□□□ -0.34
PRKD1-206ENST00000547441 LDHDQ86WU2 507 aa12.91□□□□□ -0.34
PRKD1-206ENST00000547441 TTC5Q8N0Z6 440 aa12.91□□□□□ -0.34
PRKD1-206ENST00000547441 CCDC24Q8N4L8 307 aa12.91□□□□□ -0.34
PRKD1-206ENST00000547441 HTATSF1O43719 755 aaKnown RBP12.9□□□□□ -0.34
PRKD1-206ENST00000547441 CTCFP49711 727 aaPredicted RBP12.9□□□□□ -0.34
PRKD1-206ENST00000547441 SOGA3Q5TF21 947 aa12.9□□□□□ -0.34
PRKD1-206ENST00000547441 STYK1Q6J9G0 422 aa12.9□□□□□ -0.34
PRKD1-206ENST00000547441 PRPF40BQ6NWY9 871 aaKnown RBP12.9□□□□□ -0.34
PRKD1-206ENST00000547441 CNBD1Q8NA66 436 aa12.9□□□□□ -0.34
PRKD1-206ENST00000547441 CNKSR1Q969H4 720 aa12.9□□□□□ -0.34
PRKD1-206ENST00000547441 AIDAQ96BJ3 306 aa12.9□□□□□ -0.34
PRKD1-206ENST00000547441 FAM212AQ96EL1 285 aa12.9□□□□□ -0.34
PRKD1-206ENST00000547441 L3MBTL3Q96JM7 780 aaPredicted RBP12.9□□□□□ -0.34
PRKD1-206ENST00000547441 ZNF316A6NFI3 1004 aaPredicted RBP12.89□□□□□ -0.35
PRKD1-206ENST00000547441 SRGNP10124 158 aa12.89□□□□□ -0.35
PRKD1-206ENST00000547441 DCAF8Q5TAQ9 597 aa12.89□□□□□ -0.35
PRKD1-206ENST00000547441 ZNF496Q96IT1 587 aaPredicted RBP12.89□□□□□ -0.35
PRKD1-206ENST00000547441 PHACTR3Q96KR7 559 aa12.89□□□□□ -0.35
PRKD1-206ENST00000547441 TAF1DQ9H5J8 278 aaPredicted RBP12.89□□□□□ -0.35
PRKD1-206ENST00000547441 TBC1D2BQ9UPU7 963 aa12.89□□□□□ -0.35
PRKD1-206ENST00000547441 HEG1Q9ULI3 1381 aa12.89□□□□□ -0.35
PRKD1-206ENST00000547441 SIPA1L3O60292 1781 aaPredicted RBP12.89□□□□□ -0.35
PRKD1-206ENST00000547441 BCORQ6W2J9 1755 aa12.89□□□□□ -0.35
PRKD1-206ENST00000547441 TMEM88BA6NKF7 163 aa12.88□□□□□ -0.35
PRKD1-206ENST00000547441 NPHP1O15259 732 aa12.88□□□□□ -0.35
PRKD1-206ENST00000547441 IL6STP40189 918 aaPredicted RBP12.88□□□□□ -0.35
PRKD1-206ENST00000547441 VEGFBP49765 207 aa12.88□□□□□ -0.35
PRKD1-206ENST00000547441 ST5P78524 1137 aa12.88□□□□□ -0.35
PRKD1-206ENST00000547441 TEFQ10587 303 aa12.88□□□□□ -0.35
PRKD1-206ENST00000547441 RNF25Q96BH1 459 aaPredicted RBP12.88□□□□□ -0.35
PRKD1-206ENST00000547441 MASTLQ96GX5 879 aa12.88□□□□□ -0.35
PRKD1-206ENST00000547441 SETDB2Q96T68 719 aa12.88□□□□□ -0.35
PRKD1-206ENST00000547441 TEX13AQ9BXU3 409 aaPredicted RBP12.88□□□□□ -0.35
PRKD1-206ENST00000547441 PRKRIP1Q9H875 184 aaPredicted RBP12.88□□□□□ -0.35
PRKD1-206ENST00000547441 ZNF330Q9Y3S2 320 aaPredicted RBP12.88□□□□□ -0.35
PRKD1-206ENST00000547441 CEMIPQ8WUJ3 1361 aa12.88□□□□□ -0.35
PRKD1-206ENST00000547441 ADAMTSL1Q8N6G6 1762 aa12.87□□□□□ -0.35
PRKD1-206ENST00000547441 CAMTA2O94983 1202 aa12.87□□□□□ -0.35
PRKD1-206ENST00000547441 ITGBL1O95965 494 aaPredicted RBP12.87□□□□□ -0.35
PRKD1-206ENST00000547441 ZNF790Q6PG37 636 aa12.87□□□□□ -0.35
PRKD1-206ENST00000547441 PAXIP1Q6ZW49 1069 aaPredicted RBP12.87□□□□□ -0.35
PRKD1-206ENST00000547441 IL17REQ8NFR9 667 aa12.87□□□□□ -0.35
PRKD1-206ENST00000547441 RTF1Q92541 710 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms