RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 LMOD3Q0VAK6 560 aa12.75□□□□□ -0.37
NPAS3-205ENST00000547068 FAM200AQ8TCP9 573 aa12.75□□□□□ -0.37
NPAS3-205ENST00000547068 IL17RAQ96F46 866 aa12.75□□□□□ -0.37
NPAS3-205ENST00000547068 NPHP3Q7Z494 1330 aa12.75□□□□□ -0.37
NPAS3-205ENST00000547068 TTC21BQ7Z4L5 1316 aa12.75□□□□□ -0.37
NPAS3-205ENST00000547068 SSH2Q76I76 1423 aa12.75□□□□□ -0.37
NPAS3-205ENST00000547068 TTC21AQ8NDW8 1320 aa12.75□□□□□ -0.37
NPAS3-205ENST00000547068 KRT28Q7Z3Y7 464 aa12.75□□□□□ -0.37
NPAS3-205ENST00000547068 FBLN1P23142 703 aa12.74□□□□□ -0.37
NPAS3-205ENST00000547068 TPD52L1Q16890 204 aaPredicted RBP12.74□□□□□ -0.37
NPAS3-205ENST00000547068 MON2Q7Z3U7 1717 aa12.74□□□□□ -0.37
NPAS3-205ENST00000547068 ERICH4A6NGS2 130 aa12.73□□□□□ -0.37
NPAS3-205ENST00000547068 ZNF397Q8NF99 534 aaPredicted RBP12.73□□□□□ -0.37
NPAS3-205ENST00000547068 DNAJC2Q99543 621 aaKnown RBP12.73□□□□□ -0.37
NPAS3-205ENST00000547068 POLKQ9UBT6 870 aa12.73□□□□□ -0.37
NPAS3-205ENST00000547068 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.73□□□□□ -0.37
NPAS3-205ENST00000547068 FAM83GA6ND36 823 aa12.73□□□□□ -0.37
NPAS3-205ENST00000547068 UBAP1LF5GYI3 381 aa12.73□□□□□ -0.37
NPAS3-205ENST00000547068 DNM1Q05193 864 aaKnown RBP12.73□□□□□ -0.37
NPAS3-205ENST00000547068 ZSCAN25Q6NSZ9 544 aa12.73□□□□□ -0.37
NPAS3-205ENST00000547068 LUZP1Q86V48 1076 aa12.73□□□□□ -0.37
NPAS3-205ENST00000547068 ZNF592Q92610 1267 aa12.73□□□□□ -0.37
NPAS3-205ENST00000547068 CALCOCO1Q9P1Z2 691 aa12.73□□□□□ -0.37
NPAS3-205ENST00000547068 NRBP1Q9UHY1 535 aa12.73□□□□□ -0.37
NPAS3-205ENST00000547068 SMC3Q9UQE7 1217 aa12.73□□□□□ -0.37
NPAS3-205ENST00000547068 KMT5BQ4FZB7 885 aa12.72□□□□□ -0.37
NPAS3-205ENST00000547068 ABTB2Q8N961 1025 aa12.72□□□□□ -0.37
NPAS3-205ENST00000547068 EXOC6BQ9Y2D4 811 aa12.72□□□□□ -0.37
NPAS3-205ENST00000547068 PDIA4P13667 645 aaKnown RBP12.72□□□□□ -0.37
NPAS3-205ENST00000547068 HSPA4P34932 840 aa12.72□□□□□ -0.37
NPAS3-205ENST00000547068 HAP1P54257 671 aaPredicted RBP12.72□□□□□ -0.37
NPAS3-205ENST00000547068 SLC20A2Q08357 652 aa12.72□□□□□ -0.37
NPAS3-205ENST00000547068 CEP135Q66GS9 1140 aa12.72□□□□□ -0.37
NPAS3-205ENST00000547068 PLCD3Q8N3E9 789 aa12.72□□□□□ -0.37
NPAS3-205ENST00000547068 COG3Q96JB2 828 aa12.72□□□□□ -0.37
NPAS3-205ENST00000547068 TRIM5Q9C035 493 aa12.72□□□□□ -0.37
NPAS3-205ENST00000547068 DCTN1Q14203 1278 aa12.71□□□□□ -0.37
NPAS3-205ENST00000547068 LMOD2Q6P5Q4 547 aa12.71□□□□□ -0.37
NPAS3-205ENST00000547068 NME9Q86XW9 330 aa12.71□□□□□ -0.37
NPAS3-205ENST00000547068 PTPRCP08575 1304 aa12.71□□□□□ -0.37
NPAS3-205ENST00000547068 SALL3Q9BXA9 1300 aa12.71□□□□□ -0.37
NPAS3-205ENST00000547068 PIP4K2BP78356 416 aa12.71□□□□□ -0.37
NPAS3-205ENST00000547068 TYRO3Q06418 890 aa12.71□□□□□ -0.37
NPAS3-205ENST00000547068 MAP3K11Q16584 847 aa12.71□□□□□ -0.37
NPAS3-205ENST00000547068 DDX17Q92841 729 aaKnown RBP12.71□□□□□ -0.37
NPAS3-205ENST00000547068 LRRCC1Q9C099 1032 aa12.71□□□□□ -0.37
NPAS3-205ENST00000547068 MRVI1Q9Y6F6 885 aa12.71□□□□□ -0.37
NPAS3-205ENST00000547068 LARP6Q9BRS8 491 aaKnown RBP12.7□□□□□ -0.38
NPAS3-205ENST00000547068 LIMCH1Q9UPQ0 1083 aa12.7□□□□□ -0.38
NPAS3-205ENST00000547068 AK2P54819 239 aa12.7□□□□□ -0.38
NPAS3-205ENST00000547068 NLRP6P59044 892 aa12.7□□□□□ -0.38
NPAS3-205ENST00000547068 MAPK8IP2Q13387 824 aaPredicted RBP12.7□□□□□ -0.38
NPAS3-205ENST00000547068 CAMK4Q16566 473 aa12.7□□□□□ -0.38
NPAS3-205ENST00000547068 NUP62CLQ9H1M0 184 aa12.7□□□□□ -0.38
NPAS3-205ENST00000547068 KIAA0232Q92628 1395 aa12.7□□□□□ -0.38
NPAS3-205ENST00000547068 EPB41L2O43491 1005 aaKnown RBP12.69□□□□□ -0.38
NPAS3-205ENST00000547068 ZNF75DP51815 510 aa12.69□□□□□ -0.38
NPAS3-205ENST00000547068 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.69□□□□□ -0.38
NPAS3-205ENST00000547068 FAM53CQ9NYF3 392 aa12.69□□□□□ -0.38
NPAS3-205ENST00000547068 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.69□□□□□ -0.38
NPAS3-205ENST00000547068 ZNF215Q9UL58 517 aaPredicted RBP12.69□□□□□ -0.38
NPAS3-205ENST00000547068 CHMP3Q9Y3E7 222 aa12.69□□□□□ -0.38
NPAS3-205ENST00000547068 V9GYY5 206 aaPredicted RBP12.69□□□□□ -0.38
NPAS3-205ENST00000547068 KIF20BQ96Q89 1820 aa12.69□□□□□ -0.38
NPAS3-205ENST00000547068 DLG5Q8TDM6 1919 aa12.69□□□□□ -0.38
NPAS3-205ENST00000547068 FAM193AP78312 1265 aa12.69□□□□□ -0.38
NPAS3-205ENST00000547068 PLA2G4DQ86XP0 818 aa12.69□□□□□ -0.38
NPAS3-205ENST00000547068 CBX8Q9HC52 389 aa12.69□□□□□ -0.38
NPAS3-205ENST00000547068 TUBGCP6Q96RT7 1819 aa12.69□□□□□ -0.38
NPAS3-205ENST00000547068 TULP2O00295 520 aa12.68□□□□□ -0.38
NPAS3-205ENST00000547068 ANO6Q4KMQ2 910 aa12.68□□□□□ -0.38
NPAS3-205ENST00000547068 FBXO38Q6PIJ6 1188 aa12.68□□□□□ -0.38
NPAS3-205ENST00000547068 RUFY3Q7L099 469 aa12.68□□□□□ -0.38
NPAS3-205ENST00000547068 UNC5CLQ8IV45 518 aa12.68□□□□□ -0.38
NPAS3-205ENST00000547068 CACTINQ8WUQ7 758 aaKnown RBP12.68□□□□□ -0.38
NPAS3-205ENST00000547068 TTC14Q96N46 770 aa12.68□□□□□ -0.38
NPAS3-205ENST00000547068 IL25Q9H293 177 aa12.68□□□□□ -0.38
NPAS3-205ENST00000547068 CLIP2Q9UDT6 1046 aa12.68□□□□□ -0.38
NPAS3-205ENST00000547068 MTMR6Q9Y217 621 aa12.68□□□□□ -0.38
NPAS3-205ENST00000547068 NRKQ7Z2Y5 1582 aa12.68□□□□□ -0.38
NPAS3-205ENST00000547068 GJB2P29033 226 aa12.68□□□□□ -0.38
NPAS3-205ENST00000547068 IL13P35225 146 aa12.68□□□□□ -0.38
NPAS3-205ENST00000547068 RBM6P78332 1123 aaKnown RBP12.68□□□□□ -0.38
NPAS3-205ENST00000547068 SLC4A10Q6U841 1118 aa12.68□□□□□ -0.38
NPAS3-205ENST00000547068 CREBRFQ8IUR6 639 aa12.68□□□□□ -0.38
NPAS3-205ENST00000547068 SBNO1A3KN83 1393 aa12.67□□□□□ -0.38
NPAS3-205ENST00000547068 NUTM2GQ5VZR2 741 aa12.67□□□□□ -0.38
NPAS3-205ENST00000547068 CKAP2LQ8IYA6 745 aa12.67□□□□□ -0.38
NPAS3-205ENST00000547068 RTF1Q92541 710 aaKnown RBP12.67□□□□□ -0.38
NPAS3-205ENST00000547068 TNMDQ9H2S6 317 aa12.67□□□□□ -0.38
NPAS3-205ENST00000547068 ZRANB1Q9UGI0 708 aa12.67□□□□□ -0.38
NPAS3-205ENST00000547068 SNX14Q9Y5W7 946 aa12.67□□□□□ -0.38
NPAS3-205ENST00000547068 ROBO1Q9Y6N7 1651 aa12.67□□□□□ -0.38
NPAS3-205ENST00000547068 VPS37CA5D8V6 355 aaPredicted RBP12.67□□□□□ -0.38
NPAS3-205ENST00000547068 CAPN2P17655 700 aa12.67□□□□□ -0.38
NPAS3-205ENST00000547068 PTPN14Q15678 1187 aa12.67□□□□□ -0.38
NPAS3-205ENST00000547068 ELF2Q15723 593 aa12.67□□□□□ -0.38
NPAS3-205ENST00000547068 AEBP1Q8IUX7 1158 aa12.67□□□□□ -0.38
NPAS3-205ENST00000547068 ERO1AQ96HE7 468 aa12.67□□□□□ -0.38
NPAS3-205ENST00000547068 ST7Q9NRC1 585 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms