RNA–Protein interactions for RNA: ENST00000546961.1

SCN8A-204, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-204ENST00000546961 STYK1Q6J9G0 422 aa26.72■■□□□ 1.87
SCN8A-204ENST00000546961 NBPF5PQ86XG9 351 aaPredicted RBP26.72■■□□□ 1.87
SCN8A-204ENST00000546961 MIS18AQ9NYP9 233 aa26.72■■□□□ 1.87
SCN8A-204ENST00000546961 NBPF26B4DH59 902 aa26.71■■□□□ 1.87
SCN8A-204ENST00000546961 NBPF10Q6P3W6 841 aaKnown RBP26.71■■□□□ 1.87
SCN8A-204ENST00000546961 NBPF15Q8N660 670 aa26.71■■□□□ 1.87
SCN8A-204ENST00000546961 MASTLQ96GX5 879 aa26.7■■□□□ 1.86
SCN8A-204ENST00000546961 ZNF652Q9Y2D9 606 aa26.7■■□□□ 1.86
SCN8A-204ENST00000546961 DLEC1Q9Y238 1755 aa26.69■■□□□ 1.86
SCN8A-204ENST00000546961 PRPF40BQ6NWY9 871 aaKnown RBP26.69■■□□□ 1.86
SCN8A-204ENST00000546961 POTECB2RU33 542 aa26.68■■□□□ 1.86
SCN8A-204ENST00000546961 TAOK3Q9H2K8 898 aa26.68■■□□□ 1.86
SCN8A-204ENST00000546961 ANKRD31Q8N7Z5 1873 aa26.68■■□□□ 1.86
SCN8A-204ENST00000546961 FAM177BA6PVY3 158 aa26.67■■□□□ 1.86
SCN8A-204ENST00000546961 NEFMP07197 916 aa26.67■■□□□ 1.86
SCN8A-204ENST00000546961 TPTE2Q6XPS3 522 aa26.67■■□□□ 1.86
SCN8A-204ENST00000546961 NIP7Q9Y221 180 aaKnown RBP eCLIP26.67■■□□□ 1.86
SCN8A-204ENST00000546961 SCN7AQ01118 1682 aa26.66■■□□□ 1.86
SCN8A-204ENST00000546961 TNRC6CQ9HCJ0 1690 aaKnown RBP26.66■■□□□ 1.86
SCN8A-204ENST00000546961 SOGA3Q5TF21 947 aa26.65■■□□□ 1.86
SCN8A-204ENST00000546961 CCDC88AQ3V6T2 1871 aa26.65■■□□□ 1.86
SCN8A-204ENST00000546961 LTBP3Q9NS15 1303 aa26.65■■□□□ 1.86
SCN8A-204ENST00000546961 NGEFQ8N5V2 710 aa26.64■■□□□ 1.86
SCN8A-204ENST00000546961 JMYQ8N9B5 988 aa26.64■■□□□ 1.86
SCN8A-204ENST00000546961 WDR90Q96KV7 1748 aa26.64■■□□□ 1.85
SCN8A-204ENST00000546961 NPR1P16066 1061 aa26.63■■□□□ 1.85
SCN8A-204ENST00000546961 HLFQ16534 295 aa26.63■■□□□ 1.85
SCN8A-204ENST00000546961 DDNO94850 711 aaPredicted RBP26.62■■□□□ 1.85
SCN8A-204ENST00000546961 C7orf43Q8WVR3 580 aa26.62■■□□□ 1.85
SCN8A-204ENST00000546961 GTF2E1P29083 439 aaPredicted RBP26.61■■□□□ 1.85
SCN8A-204ENST00000546961 PNISRQ8TF01 805 aaKnown RBP26.61■■□□□ 1.85
SCN8A-204ENST00000546961 SLX4Q8IY92 1834 aa26.6■■□□□ 1.85
SCN8A-204ENST00000546961 KLRG2A4D1S0 409 aaPredicted RBP26.59■■□□□ 1.85
SCN8A-204ENST00000546961 RGL2O15211 777 aa26.59■■□□□ 1.85
SCN8A-204ENST00000546961 RRP7AQ9Y3A4 280 aaKnown RBP26.59■■□□□ 1.85
SCN8A-204ENST00000546961 COL11A2P13942 1736 aaPredicted RBP26.59■■□□□ 1.85
SCN8A-204ENST00000546961 CCDC93Q567U6 631 aa26.58■■□□□ 1.85
SCN8A-204ENST00000546961 PLEKHF1Q96S99 279 aa26.57■■□□□ 1.84
SCN8A-204ENST00000546961 THUMPD2Q9BTF0 503 aaKnown RBP26.57■■□□□ 1.84
SCN8A-204ENST00000546961 FER1L6Q2WGJ9 1857 aa26.56■■□□□ 1.84
SCN8A-204ENST00000546961 EIF4A1P60842 406 aaKnown RBP26.56■■□□□ 1.84
SCN8A-204ENST00000546961 NFE2L2Q16236 605 aa26.56■■□□□ 1.84
SCN8A-204ENST00000546961 OLFM4Q6UX06 510 aa26.56■■□□□ 1.84
SCN8A-204ENST00000546961 ZNF277Q9NRM2 450 aaPredicted RBP26.55■■□□□ 1.84
SCN8A-204ENST00000546961 TIAM2Q8IVF5 1701 aa26.55■■□□□ 1.84
SCN8A-204ENST00000546961 BCORQ6W2J9 1755 aa26.54■■□□□ 1.84
SCN8A-204ENST00000546961 MYL6BP14649 208 aa26.54■■□□□ 1.84
SCN8A-204ENST00000546961 ALDH1B1P30837 517 aa26.54■■□□□ 1.84
SCN8A-204ENST00000546961 FKBP4Q02790 459 aaKnown RBP eCLIP26.54■■□□□ 1.84
SCN8A-204ENST00000546961 CHADLQ6NUI6 762 aa26.54■■□□□ 1.84
SCN8A-204ENST00000546961 PNNQ9H307 717 aaKnown RBP26.54■■□□□ 1.84
SCN8A-204ENST00000546961 ERVV-1B6SEH8 477 aa26.53■■□□□ 1.84
SCN8A-204ENST00000546961 TTLL7Q6ZT98 887 aa26.53■■□□□ 1.84
SCN8A-204ENST00000546961 RTKN2Q8IZC4 609 aa26.53■■□□□ 1.84
SCN8A-204ENST00000546961 POTEIP0CG38 1075 aa26.52■■□□□ 1.84
SCN8A-204ENST00000546961 POTEJP0CG39 1038 aa26.52■■□□□ 1.84
SCN8A-204ENST00000546961 COL13A1Q5TAT6 717 aaPredicted RBP26.52■■□□□ 1.84
SCN8A-204ENST00000546961 KIF6Q6ZMV9 814 aa26.52■■□□□ 1.84
SCN8A-204ENST00000546961 NUTM1Q86Y26 1132 aa26.52■■□□□ 1.84
SCN8A-204ENST00000546961 NYXQ9GZU5 481 aa26.52■■□□□ 1.84
SCN8A-204ENST00000546961 MAP3K15Q6ZN16 1313 aa26.51■■□□□ 1.83
SCN8A-204ENST00000546961 MAPK8IP3Q9UPT6 1336 aa26.51■■□□□ 1.83
SCN8A-204ENST00000546961 DICER1Q9UPY3 1922 aaKnown RBP26.51■■□□□ 1.83
SCN8A-204ENST00000546961 GPTP24298 496 aa26.5■■□□□ 1.83
SCN8A-204ENST00000546961 SYNE4Q8N205 404 aa26.5■■□□□ 1.83
SCN8A-204ENST00000546961 IQCA1LA6NCM1 817 aa26.49■■□□□ 1.83
SCN8A-204ENST00000546961 ZBTB3Q9H5J0 574 aa26.49■■□□□ 1.83
SCN8A-204ENST00000546961 CACNA1SQ13698 1873 aa26.47■■□□□ 1.83
SCN8A-204ENST00000546961 L3MBTL3Q96JM7 780 aaPredicted RBP26.47■■□□□ 1.83
SCN8A-204ENST00000546961 TAF1DQ9H5J8 278 aaPredicted RBP26.47■■□□□ 1.83
SCN8A-204ENST00000546961 SUSD4Q5VX71 490 aa26.46■■□□□ 1.83
SCN8A-204ENST00000546961 ZNF541Q9H0D2 1346 aa26.45■■□□□ 1.83
SCN8A-204ENST00000546961 IARSP41252 1262 aaKnown RBP26.45■■□□□ 1.82
SCN8A-204ENST00000546961 RIPK4P57078 832 aa26.45■■□□□ 1.82
SCN8A-204ENST00000546961 CRY2Q49AN0 593 aa26.45■■□□□ 1.82
SCN8A-204ENST00000546961 RPGRQ92834 1020 aaKnown RBP26.45■■□□□ 1.82
SCN8A-204ENST00000546961 TSPYL4Q9UJ04 414 aa26.45■■□□□ 1.82
SCN8A-204ENST00000546961 EIF2S2P20042 333 aaKnown RBP26.44■■□□□ 1.82
SCN8A-204ENST00000546961 EAPPQ56P03 285 aaPredicted RBP26.44■■□□□ 1.82
SCN8A-204ENST00000546961 LDHDQ86WU2 507 aa26.44■■□□□ 1.82
SCN8A-204ENST00000546961 CREBZFQ9NS37 354 aa26.44■■□□□ 1.82
SCN8A-204ENST00000546961 CLEC11AQ9Y240 323 aa26.44■■□□□ 1.82
SCN8A-204ENST00000546961 ABCC12Q96J65 1359 aa26.44■■□□□ 1.82
SCN8A-204ENST00000546961 HSPA1AP0DMV8 641 aaKnown RBP26.43■■□□□ 1.82
SCN8A-204ENST00000546961 HSPA1BP0DMV9 641 aaKnown RBP26.43■■□□□ 1.82
SCN8A-204ENST00000546961 ZNF34Q8IZ26 560 aa26.43■■□□□ 1.82
SCN8A-204ENST00000546961 MKRN1Q9UHC7 482 aaKnown RBP26.43■■□□□ 1.82
SCN8A-204ENST00000546961 HACL1Q9UJ83 578 aa26.43■■□□□ 1.82
SCN8A-204ENST00000546961 GIGYF2Q6Y7W6 1299 aaKnown RBP26.42■■□□□ 1.82
SCN8A-204ENST00000546961 JDP2Q8WYK2 163 aa26.42■■□□□ 1.82
SCN8A-204ENST00000546961 UBN2Q6ZU65 1347 aa26.41■■□□□ 1.82
SCN8A-204ENST00000546961 DLG5Q8TDM6 1919 aa26.41■■□□□ 1.82
SCN8A-204ENST00000546961 ARFGEF2Q9Y6D5 1785 aa26.41■■□□□ 1.82
SCN8A-204ENST00000546961 FZD9O00144 591 aa26.41■■□□□ 1.82
SCN8A-204ENST00000546961 TCERG1O14776 1098 aaKnown RBP26.41■■□□□ 1.82
SCN8A-204ENST00000546961 HOXA10P31260 410 aaPredicted RBP26.41■■□□□ 1.82
SCN8A-204ENST00000546961 CC2D2BQ6DHV5 1058 aa26.41■■□□□ 1.82
SCN8A-204ENST00000546961 PCNTO95613 3336 aa26.41■■□□□ 1.82
SCN8A-204ENST00000546961 RBM17Q96I25 401 aaKnown RBP26.4■■□□□ 1.82
SCN8A-204ENST00000546961 PSMD1Q99460 953 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms