RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 SETDB2Q96T68 719 aa12.62□□□□□ -0.39
SSH1-205ENST00000546812 ZNF541Q9H0D2 1346 aa12.62□□□□□ -0.39
SSH1-205ENST00000546812 FER1L6Q2WGJ9 1857 aa12.61□□□□□ -0.39
SSH1-205ENST00000546812 IL6STP40189 918 aaPredicted RBP12.61□□□□□ -0.39
SSH1-205ENST00000546812 ST5P78524 1137 aa12.61□□□□□ -0.39
SSH1-205ENST00000546812 FKBP4Q02790 459 aaKnown RBP eCLIP12.61□□□□□ -0.39
SSH1-205ENST00000546812 BEGAINQ9BUH8 593 aa12.61□□□□□ -0.39
SSH1-205ENST00000546812 DICER1Q9UPY3 1922 aaKnown RBP12.6□□□□□ -0.39
SSH1-205ENST00000546812 MRC1P22897 1456 aa12.6□□□□□ -0.39
SSH1-205ENST00000546812 ECE1P42892 770 aa12.6□□□□□ -0.39
SSH1-205ENST00000546812 MORC1Q86VD1 984 aa12.6□□□□□ -0.39
SSH1-205ENST00000546812 TTC5Q8N0Z6 440 aa12.6□□□□□ -0.39
SSH1-205ENST00000546812 POLR3GLQ9BT43 218 aa12.6□□□□□ -0.39
SSH1-205ENST00000546812 TEX13AQ9BXU3 409 aaPredicted RBP12.6□□□□□ -0.39
SSH1-205ENST00000546812 PANK3Q9H999 370 aa12.6□□□□□ -0.39
SSH1-205ENST00000546812 DDX21Q9NR30 783 aaKnown RBP eCLIP12.6□□□□□ -0.39
SSH1-205ENST00000546812 ZNF277Q9NRM2 450 aaPredicted RBP12.6□□□□□ -0.39
SSH1-205ENST00000546812 FZD9O00144 591 aa12.59□□□□□ -0.39
SSH1-205ENST00000546812 CAMTA2O94983 1202 aa12.59□□□□□ -0.39
SSH1-205ENST00000546812 RTKN2Q8IZC4 609 aa12.59□□□□□ -0.39
SSH1-205ENST00000546812 GPC2Q8N158 579 aa12.59□□□□□ -0.39
SSH1-205ENST00000546812 CAPNS2Q96L46 248 aa12.59□□□□□ -0.39
SSH1-205ENST00000546812 GPR101Q96P66 508 aaPredicted RBP12.59□□□□□ -0.39
SSH1-205ENST00000546812 ZNF330Q9Y3S2 320 aaPredicted RBP12.59□□□□□ -0.39
SSH1-205ENST00000546812 SCN4AP35499 1836 aa12.59□□□□□ -0.39
SSH1-205ENST00000546812 RNF123Q5XPI4 1314 aa12.59□□□□□ -0.39
SSH1-205ENST00000546812 VIRMAQ69YN4 1812 aaKnown RBP12.58□□□□□ -0.4
SSH1-205ENST00000546812 NPR1P16066 1061 aa12.58□□□□□ -0.4
SSH1-205ENST00000546812 MTHFSDQ2M296 383 aaKnown RBP12.58□□□□□ -0.4
SSH1-205ENST00000546812 NPM2Q86SE8 214 aaKnown RBP12.58□□□□□ -0.4
SSH1-205ENST00000546812 ANKRD31Q8N7Z5 1873 aa12.58□□□□□ -0.4
SSH1-205ENST00000546812 ZNF496Q96IT1 587 aaPredicted RBP12.58□□□□□ -0.4
SSH1-205ENST00000546812 SCN11AQ9UI33 1791 aa12.58□□□□□ -0.4
SSH1-205ENST00000546812 KLRG2A4D1S0 409 aaPredicted RBP12.57□□□□□ -0.4
SSH1-205ENST00000546812 PAXIP1Q6ZW49 1069 aaPredicted RBP12.57□□□□□ -0.4
SSH1-205ENST00000546812 SLX4Q8IY92 1834 aa12.57□□□□□ -0.4
SSH1-205ENST00000546812 HEG1Q9ULI3 1381 aa12.56□□□□□ -0.4
SSH1-205ENST00000546812 A1BGP04217 495 aa12.56□□□□□ -0.4
SSH1-205ENST00000546812 HMOX1P09601 288 aa12.56□□□□□ -0.4
SSH1-205ENST00000546812 MAP2K2P36507 400 aa12.56□□□□□ -0.4
SSH1-205ENST00000546812 IARSP41252 1262 aaKnown RBP12.56□□□□□ -0.4
SSH1-205ENST00000546812 CYP4F22Q6NT55 531 aa12.56□□□□□ -0.4
SSH1-205ENST00000546812 ZNF790Q6PG37 636 aa12.56□□□□□ -0.4
SSH1-205ENST00000546812 OLFM4Q6UX06 510 aa12.56□□□□□ -0.4
SSH1-205ENST00000546812 NBPF5PQ86XG9 351 aaPredicted RBP12.56□□□□□ -0.4
SSH1-205ENST00000546812 COL11A2P13942 1736 aaPredicted RBP12.56□□□□□ -0.4
SSH1-205ENST00000546812 ADAMTSL1Q8N6G6 1762 aa12.56□□□□□ -0.4
SSH1-205ENST00000546812 GRM1Q13255 1194 aa12.55□□□□□ -0.4
SSH1-205ENST00000546812 CST9Q5W186 159 aa12.55□□□□□ -0.4
SSH1-205ENST00000546812 CLEC4GQ6UXB4 293 aa12.55□□□□□ -0.4
SSH1-205ENST00000546812 SYNE4Q8N205 404 aa12.55□□□□□ -0.4
SSH1-205ENST00000546812 CFAP44Q96MT7 982 aa12.55□□□□□ -0.4
SSH1-205ENST00000546812 MCOLN1Q9GZU1 580 aa12.55□□□□□ -0.4
SSH1-205ENST00000546812 CA12O43570 354 aa12.54□□□□□ -0.4
SSH1-205ENST00000546812 FMR1Q06787 632 aaKnown RBP eCLIP12.54□□□□□ -0.4
SSH1-205ENST00000546812 DZIP3Q86Y13 1208 aaKnown RBP12.54□□□□□ -0.4
SSH1-205ENST00000546812 JDP2Q8WYK2 163 aa12.54□□□□□ -0.4
SSH1-205ENST00000546812 TSKSQ9UJT2 592 aa12.54□□□□□ -0.4
SSH1-205ENST00000546812 TLL2Q9Y6L7 1015 aa12.54□□□□□ -0.4
SSH1-205ENST00000546812 TNRC18O15417 2968 aaPredicted RBP12.54□□□□□ -0.4
SSH1-205ENST00000546812 AOC2O75106 756 aa12.53□□□□□ -0.4
SSH1-205ENST00000546812 LMOD1P29536 600 aaPredicted RBP12.53□□□□□ -0.4
SSH1-205ENST00000546812 ALDH1B1P30837 517 aa12.53□□□□□ -0.4
SSH1-205ENST00000546812 TEFQ10587 303 aa12.53□□□□□ -0.4
SSH1-205ENST00000546812 TPTE2Q6XPS3 522 aa12.53□□□□□ -0.4
SSH1-205ENST00000546812 FMNL2Q96PY5 1086 aa12.53□□□□□ -0.4
SSH1-205ENST00000546812 PSMD1Q99460 953 aa12.53□□□□□ -0.4
SSH1-205ENST00000546812 GJA3Q9Y6H8 435 aa12.53□□□□□ -0.4
SSH1-205ENST00000546812 TRAF5O00463 557 aa12.52□□□□□ -0.41
SSH1-205ENST00000546812 EPS15P42566 896 aa12.52□□□□□ -0.41
SSH1-205ENST00000546812 EIF6P56537 245 aaKnown RBP12.52□□□□□ -0.41
SSH1-205ENST00000546812 USP50Q70EL3 339 aaPredicted RBP12.52□□□□□ -0.41
SSH1-205ENST00000546812 IL17REQ8NFR9 667 aa12.52□□□□□ -0.41
SSH1-205ENST00000546812 SCNN1DP51172 638 aa12.51□□□□□ -0.41
SSH1-205ENST00000546812 ZNF652Q9Y2D9 606 aa12.51□□□□□ -0.41
SSH1-205ENST00000546812 KNSTRNQ9Y448 316 aa12.51□□□□□ -0.41
SSH1-205ENST00000546812 SCN7AQ01118 1682 aa12.51□□□□□ -0.41
SSH1-205ENST00000546812 PDE4DIPQ5VU43 2346 aa12.5□□□□□ -0.41
SSH1-205ENST00000546812 GNAT3A8MTJ3 354 aa12.5□□□□□ -0.41
SSH1-205ENST00000546812 DGKZQ13574 1117 aa12.5□□□□□ -0.41
SSH1-205ENST00000546812 CC2D2BQ6DHV5 1058 aa12.5□□□□□ -0.41
SSH1-205ENST00000546812 SAPCD2Q86UD0 394 aa12.5□□□□□ -0.41
SSH1-205ENST00000546812 THSD7BQ9C0I4 1608 aa12.5□□□□□ -0.41
SSH1-205ENST00000546812 UBR2Q8IWV8 1755 aa12.49□□□□□ -0.41
SSH1-205ENST00000546812 RGL2O15211 777 aa12.49□□□□□ -0.41
SSH1-205ENST00000546812 BRPF1P55201 1214 aaPredicted RBP12.49□□□□□ -0.41
SSH1-205ENST00000546812 HHIPL1Q96JK4 782 aa12.49□□□□□ -0.41
SSH1-205ENST00000546812 TIMELESSQ9UNS1 1208 aa12.49□□□□□ -0.41
SSH1-205ENST00000546812 NIP7Q9Y221 180 aaKnown RBP eCLIP12.49□□□□□ -0.41
SSH1-205ENST00000546812 USP16Q9Y5T5 823 aa12.49□□□□□ -0.41
SSH1-205ENST00000546812 SNED1Q8TER0 1413 aa12.48□□□□□ -0.41
SSH1-205ENST00000546812 KCNQ3O43525 872 aa12.48□□□□□ -0.41
SSH1-205ENST00000546812 DIAPH1O60610 1272 aaKnown RBP12.48□□□□□ -0.41
SSH1-205ENST00000546812 PIP4K2AP48426 406 aaPredicted RBP12.48□□□□□ -0.41
SSH1-205ENST00000546812 GRIPAP1Q4V328 841 aa12.48□□□□□ -0.41
SSH1-205ENST00000546812 GAS2L2Q8NHY3 880 aa12.48□□□□□ -0.41
SSH1-205ENST00000546812 ARFGEF2Q9Y6D5 1785 aa12.48□□□□□ -0.41
SSH1-205ENST00000546812 FAM177BA6PVY3 158 aa12.47□□□□□ -0.41
SSH1-205ENST00000546812 BTBD11A6QL63 1104 aa12.47□□□□□ -0.41
SSH1-205ENST00000546812 CELF2O95319 508 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms