RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 JAKMIP1Q96N16 626 aaKnown RBP12.22□□□□□ -0.45
SSH1-203ENST00000546433 TRMT112Q9UI30 125 aaKnown RBP12.22□□□□□ -0.45
SSH1-203ENST00000546433 CPS1P31327 1500 aa12.22□□□□□ -0.45
SSH1-203ENST00000546433 TPTE2Q6XPS3 522 aa12.22□□□□□ -0.45
SSH1-203ENST00000546433 CEP57L1Q8IYX8 460 aa12.22□□□□□ -0.45
SSH1-203ENST00000546433 C6orf229H3BNL8 230 aa12.22□□□□□ -0.45
SSH1-203ENST00000546433 STK3Q13188 491 aa12.22□□□□□ -0.45
SSH1-203ENST00000546433 ZFYVE27Q5T4F4 411 aa12.22□□□□□ -0.45
SSH1-203ENST00000546433 ZSCAN29Q8IWY8 852 aaPredicted RBP12.22□□□□□ -0.45
SSH1-203ENST00000546433 AIDAQ96BJ3 306 aa12.22□□□□□ -0.45
SSH1-203ENST00000546433 GLRX3O76003 335 aaKnown RBP12.21□□□□□ -0.45
SSH1-203ENST00000546433 ERLIN2O94905 339 aa12.21□□□□□ -0.45
SSH1-203ENST00000546433 SNRPA1P09661 255 aaKnown RBP12.21□□□□□ -0.45
SSH1-203ENST00000546433 DCAF5Q96JK2 942 aa12.21□□□□□ -0.45
SSH1-203ENST00000546433 AKAP2Q9Y2D5 859 aa12.21□□□□□ -0.45
SSH1-203ENST00000546433 SMTNL1A8MU46 457 aa12.21□□□□□ -0.45
SSH1-203ENST00000546433 CEBPZQ03701 1054 aaKnown RBP12.21□□□□□ -0.45
SSH1-203ENST00000546433 CNKSR2Q8WXI2 1034 aa12.21□□□□□ -0.45
SSH1-203ENST00000546433 UBAC1Q9BSL1 405 aa12.21□□□□□ -0.45
SSH1-203ENST00000546433 ABCC3O15438 1527 aa12.21□□□□□ -0.45
SSH1-203ENST00000546433 CCDC66A2RUB6 948 aa12.21□□□□□ -0.46
SSH1-203ENST00000546433 NUP62CLQ9H1M0 184 aa12.21□□□□□ -0.46
SSH1-203ENST00000546433 CEP131Q9UPN4 1083 aa12.21□□□□□ -0.46
SSH1-203ENST00000546433 MCM4P33991 863 aa12.21□□□□□ -0.46
SSH1-203ENST00000546433 ARHGAP31Q2M1Z3 1444 aa12.2□□□□□ -0.46
SSH1-203ENST00000546433 KDM4AO75164 1064 aa12.2□□□□□ -0.46
SSH1-203ENST00000546433 IMMTQ16891 758 aaKnown RBP12.2□□□□□ -0.46
SSH1-203ENST00000546433 COL17A1Q9UMD9 1497 aaPredicted RBP12.2□□□□□ -0.46
SSH1-203ENST00000546433 AKAP4Q5JQC9 854 aa12.2□□□□□ -0.46
SSH1-203ENST00000546433 PDE6BP35913 854 aa12.2□□□□□ -0.46
SSH1-203ENST00000546433 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.2□□□□□ -0.46
SSH1-203ENST00000546433 PATL2C9JE40 543 aaKnown RBP12.2□□□□□ -0.46
SSH1-203ENST00000546433 FKBP4Q02790 459 aaKnown RBP eCLIP12.2□□□□□ -0.46
SSH1-203ENST00000546433 DUSP27Q5VZP5 1158 aa12.2□□□□□ -0.46
SSH1-203ENST00000546433 LARP1Q6PKG0 1096 aaKnown RBP12.2□□□□□ -0.46
SSH1-203ENST00000546433 CWC27Q6UX04 472 aaKnown RBP12.2□□□□□ -0.46
SSH1-203ENST00000546433 IL27Q8NEV9 243 aa12.2□□□□□ -0.46
SSH1-203ENST00000546433 MX1P20591 662 aa12.19□□□□□ -0.46
SSH1-203ENST00000546433 TDO2P48775 406 aa12.19□□□□□ -0.46
SSH1-203ENST00000546433 MAP4K4O95819 1239 aaPredicted RBP12.19□□□□□ -0.46
SSH1-203ENST00000546433 BRPF1P55201 1214 aaPredicted RBP12.19□□□□□ -0.46
SSH1-203ENST00000546433 TTLL5Q6EMB2 1281 aa12.19□□□□□ -0.46
SSH1-203ENST00000546433 BRINP3Q76B58 766 aa12.19□□□□□ -0.46
SSH1-203ENST00000546433 KRI1Q8N9T8 703 aaKnown RBP12.19□□□□□ -0.46
SSH1-203ENST00000546433 HYPKQ9NX55 129 aa12.19□□□□□ -0.46
SSH1-203ENST00000546433 GRM1Q13255 1194 aa12.19□□□□□ -0.46
SSH1-203ENST00000546433 BMP2KQ9NSY1 1161 aaPredicted RBP12.19□□□□□ -0.46
SSH1-203ENST00000546433 TRIM37O94972 964 aa12.19□□□□□ -0.46
SSH1-203ENST00000546433 ERLIN1O75477 346 aa12.19□□□□□ -0.46
SSH1-203ENST00000546433 RARSP54136 660 aaKnown RBP12.19□□□□□ -0.46
SSH1-203ENST00000546433 IQCEQ6IPM2 695 aa12.19□□□□□ -0.46
SSH1-203ENST00000546433 OGFOD1Q8N543 542 aa12.18□□□□□ -0.46
SSH1-203ENST00000546433 CCDC112Q8NEF3 446 aa12.18□□□□□ -0.46
SSH1-203ENST00000546433 MAP3K4Q9Y6R4 1608 aa12.18□□□□□ -0.46
SSH1-203ENST00000546433 TMEM132AQ24JP5 1023 aa12.18□□□□□ -0.46
SSH1-203ENST00000546433 SPC24Q8NBT2 197 aa12.18□□□□□ -0.46
SSH1-203ENST00000546433 NUP133Q8WUM0 1156 aa12.18□□□□□ -0.46
SSH1-203ENST00000546433 NLRP3Q96P20 1036 aa12.18□□□□□ -0.46
SSH1-203ENST00000546433 SH2B1Q9NRF2 756 aaPredicted RBP12.18□□□□□ -0.46
SSH1-203ENST00000546433 U3KPZ7 1027 aaPredicted RBP12.18□□□□□ -0.46
SSH1-203ENST00000546433 DEF6Q9H4E7 631 aa12.18□□□□□ -0.46
SSH1-203ENST00000546433 DDX17Q92841 729 aaKnown RBP12.18□□□□□ -0.46
SSH1-203ENST00000546433 ZNF287Q9HBT7 754 aa12.18□□□□□ -0.46
SSH1-203ENST00000546433 SPON1Q9HCB6 807 aa12.18□□□□□ -0.46
SSH1-203ENST00000546433 PTPRCP08575 1304 aa12.18□□□□□ -0.46
SSH1-203ENST00000546433 HMGB1P09429 215 aaKnown RBP12.17□□□□□ -0.46
SSH1-203ENST00000546433 CCDC152Q4G0S7 254 aa12.17□□□□□ -0.46
SSH1-203ENST00000546433 IFIT1P09914 478 aaKnown RBP12.17□□□□□ -0.46
SSH1-203ENST00000546433 CCDC184Q52MB2 194 aa12.17□□□□□ -0.46
SSH1-203ENST00000546433 IL1RAPL2Q9NP60 686 aa12.17□□□□□ -0.46
SSH1-203ENST00000546433 CASTP20810 708 aaKnown RBP12.17□□□□□ -0.46
SSH1-203ENST00000546433 LEKR1Q6ZMV7 388 aa12.17□□□□□ -0.46
SSH1-203ENST00000546433 CCDC191Q8NCU4 936 aa12.17□□□□□ -0.46
SSH1-203ENST00000546433 UPF3BQ9BZI7 483 aaKnown RBP12.17□□□□□ -0.46
SSH1-203ENST00000546433 MAP3K11Q16584 847 aa12.16□□□□□ -0.46
SSH1-203ENST00000546433 GOLGA6L10A6NI86 522 aa12.16□□□□□ -0.46
SSH1-203ENST00000546433 RAI14Q9P0K7 980 aa12.16□□□□□ -0.46
SSH1-203ENST00000546433 EIF3JO75822 258 aaKnown RBP12.16□□□□□ -0.46
SSH1-203ENST00000546433 ARHGEF6Q15052 776 aa12.16□□□□□ -0.46
SSH1-203ENST00000546433 CCDC181Q5TID7 509 aa12.16□□□□□ -0.46
SSH1-203ENST00000546433 ARHGAP27Q6ZUM4 889 aa12.16□□□□□ -0.46
SSH1-203ENST00000546433 CNBD1Q8NA66 436 aa12.16□□□□□ -0.46
SSH1-203ENST00000546433 GJD4Q96KN9 370 aaPredicted RBP12.16□□□□□ -0.46
SSH1-203ENST00000546433 ANKRD18BA2A2Z9 1011 aa12.16□□□□□ -0.46
SSH1-203ENST00000546433 LRP2BPQ9P2M1 347 aa12.16□□□□□ -0.46
SSH1-203ENST00000546433 KIF2AO00139 706 aaPredicted RBP12.15□□□□□ -0.46
SSH1-203ENST00000546433 EMILIN1Q9Y6C2 1016 aa12.15□□□□□ -0.46
SSH1-203ENST00000546433 ANKARQ7Z5J8 1434 aa12.15□□□□□ -0.46
SSH1-203ENST00000546433 ATP2B2Q01814 1243 aa12.15□□□□□ -0.46
SSH1-203ENST00000546433 H0YHG0 523 aa12.15□□□□□ -0.46
SSH1-203ENST00000546433 UTP14AQ9BVJ6 771 aaKnown RBP12.15□□□□□ -0.46
SSH1-203ENST00000546433 BCS1LQ9Y276 419 aa12.15□□□□□ -0.46
SSH1-203ENST00000546433 NLGN1Q8N2Q7 840 aa12.15□□□□□ -0.46
SSH1-203ENST00000546433 SSH1Q8WYL5 1049 aa12.15□□□□□ -0.46
SSH1-203ENST00000546433 HOOK2Q96ED9 719 aa12.15□□□□□ -0.46
SSH1-203ENST00000546433 SCAND2PQ9GZW5 306 aaPredicted RBP12.15□□□□□ -0.46
SSH1-203ENST00000546433 CLTCQ00610 1675 aaKnown RBP12.14□□□□□ -0.47
SSH1-203ENST00000546433 CCDC196A0A1B0GTZ2 297 aa12.14□□□□□ -0.47
SSH1-203ENST00000546433 PHAXQ9H814 394 aaKnown RBP12.14□□□□□ -0.47
SSH1-203ENST00000546433 IL16Q14005 1332 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms