RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 FBXO41Q8TF61 875 aa24.3■■□□□ 1.48
SKP2-208ENST00000546211 ZNF330Q9Y3S2 320 aaPredicted RBP24.3■■□□□ 1.48
SKP2-208ENST00000546211 ARFGEF2Q9Y6D5 1785 aa24.3■■□□□ 1.48
SKP2-208ENST00000546211 CICQ96RK0 1608 aaPredicted RBP24.3■■□□□ 1.48
SKP2-208ENST00000546211 IGKV5-2P06315 115 aa24.29■■□□□ 1.48
SKP2-208ENST00000546211 NBPF7P0C2Y1 421 aaPredicted RBP24.29■■□□□ 1.48
SKP2-208ENST00000546211 RGS3P49796 1198 aa24.29■■□□□ 1.48
SKP2-208ENST00000546211 NEURL1BA8MQ27 555 aa24.29■■□□□ 1.48
SKP2-208ENST00000546211 RBM6P78332 1123 aaKnown RBP24.28■■□□□ 1.48
SKP2-208ENST00000546211 KIF6Q6ZMV9 814 aa24.28■■□□□ 1.48
SKP2-208ENST00000546211 GRM8O00222 908 aa24.27■■□□□ 1.48
SKP2-208ENST00000546211 NPM2Q86SE8 214 aaKnown RBP24.27■■□□□ 1.48
SKP2-208ENST00000546211 ZBTB1Q9Y2K1 713 aa24.27■■□□□ 1.48
SKP2-208ENST00000546211 ATP8B2P98198 1209 aa24.26■■□□□ 1.47
SKP2-208ENST00000546211 ZBTB3Q9H5J0 574 aa24.26■■□□□ 1.47
SKP2-208ENST00000546211 DCTPP1Q9H773 170 aa24.26■■□□□ 1.47
SKP2-208ENST00000546211 NUP188Q5SRE5 1749 aa24.26■■□□□ 1.47
SKP2-208ENST00000546211 ZNF831Q5JPB2 1677 aa24.25■■□□□ 1.47
SKP2-208ENST00000546211 IL6STP40189 918 aaPredicted RBP24.25■■□□□ 1.47
SKP2-208ENST00000546211 NUCB1Q02818 461 aa24.25■■□□□ 1.47
SKP2-208ENST00000546211 GCKRQ14397 625 aa24.25■■□□□ 1.47
SKP2-208ENST00000546211 CCDC87Q9NVE4 849 aa24.25■■□□□ 1.47
SKP2-208ENST00000546211 UTYO14607 1347 aa24.25■■□□□ 1.47
SKP2-208ENST00000546211 ITPK1Q13572 414 aa24.25■■□□□ 1.47
SKP2-208ENST00000546211 KRT27Q7Z3Y8 459 aa24.25■■□□□ 1.47
SKP2-208ENST00000546211 BTAF1O14981 1849 aa24.24■■□□□ 1.47
SKP2-208ENST00000546211 PTF1AQ7RTS3 328 aa24.24■■□□□ 1.47
SKP2-208ENST00000546211 CRKLP46109 303 aaKnown RBP24.23■■□□□ 1.47
SKP2-208ENST00000546211 ANKRD45Q5TZF3 282 aa24.23■■□□□ 1.47
SKP2-208ENST00000546211 ARXQ96QS3 562 aa24.23■■□□□ 1.47
SKP2-208ENST00000546211 ATP5J2-PTCD1G3V325 749 aa24.22■■□□□ 1.47
SKP2-208ENST00000546211 FAM196AQ6ZSG2 479 aa24.22■■□□□ 1.47
SKP2-208ENST00000546211 CHD1LQ86WJ1 897 aa24.22■■□□□ 1.47
SKP2-208ENST00000546211 INTS5Q6P9B9 1019 aaKnown RBP24.21■■□□□ 1.47
SKP2-208ENST00000546211 TSHZ2Q9NRE2 1034 aa24.21■■□□□ 1.47
SKP2-208ENST00000546211 ZBTB47Q9UFB7 747 aaPredicted RBP24.21■■□□□ 1.47
SKP2-208ENST00000546211 SBF2Q86WG5 1849 aa24.21■■□□□ 1.47
SKP2-208ENST00000546211 MAP3K15Q6ZN16 1313 aa24.21■■□□□ 1.47
SKP2-208ENST00000546211 AFDNP55196 1824 aaKnown RBP24.21■■□□□ 1.47
SKP2-208ENST00000546211 PNMA6EA0A0J9YXQ4 647 aa24.2■■□□□ 1.47
SKP2-208ENST00000546211 BCL11BQ9C0K0 894 aaPredicted RBP24.2■■□□□ 1.47
SKP2-208ENST00000546211 RREB1Q92766 1687 aa24.2■■□□□ 1.46
SKP2-208ENST00000546211 CWC25Q9NXE8 425 aaPredicted RBP24.2■■□□□ 1.46
SKP2-208ENST00000546211 TCIRG1Q13488 830 aa24.19■■□□□ 1.46
SKP2-208ENST00000546211 PPP1R42Q7Z4L9 355 aa24.19■■□□□ 1.46
SKP2-208ENST00000546211 CCDC191Q8NCU4 936 aa24.19■■□□□ 1.46
SKP2-208ENST00000546211 SSH3Q8TE77 659 aa24.19■■□□□ 1.46
SKP2-208ENST00000546211 LNPKQ9C0E8 428 aa24.19■■□□□ 1.46
SKP2-208ENST00000546211 BRWD3Q6RI45 1802 aa24.18■■□□□ 1.46
SKP2-208ENST00000546211 A0A087WZG4 1122 aa24.18■■□□□ 1.46
SKP2-208ENST00000546211 EIF5P55010 431 aaKnown RBP24.18■■□□□ 1.46
SKP2-208ENST00000546211 DZIP3Q86Y13 1208 aaKnown RBP24.18■■□□□ 1.46
SKP2-208ENST00000546211 SUCLG2Q96I99 432 aa24.18■■□□□ 1.46
SKP2-208ENST00000546211 COL5A3P25940 1745 aaPredicted RBP24.18■■□□□ 1.46
SKP2-208ENST00000546211 SRGAP3O43295 1099 aa24.17■■□□□ 1.46
SKP2-208ENST00000546211 RXRBP28702 533 aa24.17■■□□□ 1.46
SKP2-208ENST00000546211 MTX1Q13505 466 aa24.17■■□□□ 1.46
SKP2-208ENST00000546211 HSP90AB3PQ58FF7 597 aa24.17■■□□□ 1.46
SKP2-208ENST00000546211 GIGYF2Q6Y7W6 1299 aaKnown RBP24.17■■□□□ 1.46
SKP2-208ENST00000546211 ERVV-1B6SEH8 477 aa24.16■■□□□ 1.46
SKP2-208ENST00000546211 POLA2Q14181 598 aa24.16■■□□□ 1.46
SKP2-208ENST00000546211 ISCA1Q9BUE6 129 aa24.16■■□□□ 1.46
SKP2-208ENST00000546211 PDE4AP27815 886 aa24.16■■□□□ 1.46
SKP2-208ENST00000546211 LINC00116Q8NCU8 138 aa24.16■■□□□ 1.46
SKP2-208ENST00000546211 CCNL1Q9UK58 526 aaPredicted RBP24.16■■□□□ 1.46
SKP2-208ENST00000546211 CNTNAP4Q9C0A0 1308 aa24.15■■□□□ 1.46
SKP2-208ENST00000546211 UBE3BQ7Z3V4 1068 aa24.15■■□□□ 1.46
SKP2-208ENST00000546211 COL15A1P39059 1388 aa24.14■■□□□ 1.46
SKP2-208ENST00000546211 TRIM28Q13263 835 aaKnown RBP24.14■■□□□ 1.45
SKP2-208ENST00000546211 BICC1Q9H694 974 aaKnown RBP24.14■■□□□ 1.45
SKP2-208ENST00000546211 TBC1D2BQ9UPU7 963 aa24.14■■□□□ 1.45
SKP2-208ENST00000546211 H7C1W4 665 aa24.13■■□□□ 1.45
SKP2-208ENST00000546211 KAZALD1Q96I82 304 aa24.13■■□□□ 1.45
SKP2-208ENST00000546211 EXOC6BQ9Y2D4 811 aa24.13■■□□□ 1.45
SKP2-208ENST00000546211 LY75O60449 1722 aa24.13■■□□□ 1.45
SKP2-208ENST00000546211 APBB1O00213 710 aa24.12■■□□□ 1.45
SKP2-208ENST00000546211 HLFQ16534 295 aa24.12■■□□□ 1.45
SKP2-208ENST00000546211 CASP7P55210 303 aa24.12■■□□□ 1.45
SKP2-208ENST00000546211 KCNQ4P56696 695 aa24.12■■□□□ 1.45
SKP2-208ENST00000546211 RC3H1Q5TC82 1133 aaKnown RBP24.12■■□□□ 1.45
SKP2-208ENST00000546211 JARID2Q92833 1246 aaPredicted RBP24.11■■□□□ 1.45
SKP2-208ENST00000546211 SURF6O75683 361 aaKnown RBP24.1■■□□□ 1.45
SKP2-208ENST00000546211 HSP90AB4PQ58FF6 505 aa24.1■■□□□ 1.45
SKP2-208ENST00000546211 LRRCC1Q9C099 1032 aa24.1■■□□□ 1.45
SKP2-208ENST00000546211 MYH14Q7Z406 1995 aaKnown RBP24.1■■□□□ 1.45
SKP2-208ENST00000546211 RAB11FIP3O75154 756 aa24.09■■□□□ 1.45
SKP2-208ENST00000546211 TRIM37O94972 964 aa24.09■■□□□ 1.45
SKP2-208ENST00000546211 FAM161AQ3B820 660 aa24.08■■□□□ 1.45
SKP2-208ENST00000546211 ANKRD36CQ5JPF3 1778 aa24.08■■□□□ 1.45
SKP2-208ENST00000546211 EPHA10Q5JZY3 1008 aa24.08■■□□□ 1.44
SKP2-208ENST00000546211 SMARCA5O60264 1052 aaPredicted RBP24.07■■□□□ 1.44
SKP2-208ENST00000546211 CAMTA2O94983 1202 aa24.07■■□□□ 1.44
SKP2-208ENST00000546211 GPTP24298 496 aa24.07■■□□□ 1.44
SKP2-208ENST00000546211 RABL6Q3YEC7 729 aaPredicted RBP24.07■■□□□ 1.44
SKP2-208ENST00000546211 NLRP10Q86W26 655 aa24.07■■□□□ 1.44
SKP2-208ENST00000546211 BACH2Q9BYV9 841 aa24.07■■□□□ 1.44
SKP2-208ENST00000546211 RGS17Q9UGC6 210 aaPredicted RBP24.07■■□□□ 1.44
SKP2-208ENST00000546211 PCCAP05165 728 aaPredicted RBP24.06■■□□□ 1.44
SKP2-208ENST00000546211 RTL5Q5HYW3 569 aaPredicted RBP24.06■■□□□ 1.44
SKP2-208ENST00000546211 ZBTB38Q8NAP3 1195 aaPredicted RBP24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms