RNA–Protein interactions for RNA: ENST00000545908.5

MTHFD1-202, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2 BASIC

Gene MTHFD1, Length 6,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-202ENST00000545908 CUL5Q93034 780 aa10.66□□□□□ -0.7
MTHFD1-202ENST00000545908 JMYQ8N9B5 988 aa10.66□□□□□ -0.7
MTHFD1-202ENST00000545908 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.66□□□□□ -0.7
MTHFD1-202ENST00000545908 EDC4Q6P2E9 1401 aaKnown RBP10.65□□□□□ -0.7
MTHFD1-202ENST00000545908 ZNF804AQ7Z570 1209 aa10.65□□□□□ -0.7
MTHFD1-202ENST00000545908 PDILTQ8N807 584 aa10.65□□□□□ -0.7
MTHFD1-202ENST00000545908 RBM17Q96I25 401 aaKnown RBP10.65□□□□□ -0.7
MTHFD1-202ENST00000545908 WWC3Q9ULE0 1092 aa10.65□□□□□ -0.7
MTHFD1-202ENST00000545908 MYCNP04198 464 aaPredicted RBP10.65□□□□□ -0.7
MTHFD1-202ENST00000545908 ZFYVE27Q5T4F4 411 aa10.65□□□□□ -0.7
MTHFD1-202ENST00000545908 DCAF5Q96JK2 942 aa10.65□□□□□ -0.7
MTHFD1-202ENST00000545908 EHMT1Q9H9B1 1298 aa10.65□□□□□ -0.7
MTHFD1-202ENST00000545908 RNMTO43148 476 aaKnown RBP10.65□□□□□ -0.7
MTHFD1-202ENST00000545908 COPS6Q7L5N1 327 aa10.65□□□□□ -0.7
MTHFD1-202ENST00000545908 ZNF213O14771 459 aa10.65□□□□□ -0.71
MTHFD1-202ENST00000545908 LETM1O95202 739 aaPredicted RBP10.65□□□□□ -0.71
MTHFD1-202ENST00000545908 FEZ1Q99689 392 aa10.65□□□□□ -0.71
MTHFD1-202ENST00000545908 CCNL1Q9UK58 526 aaPredicted RBP10.65□□□□□ -0.71
MTHFD1-202ENST00000545908 SYCP1Q15431 976 aa10.64□□□□□ -0.71
MTHFD1-202ENST00000545908 NPHP4O75161 1426 aaPredicted RBP10.64□□□□□ -0.71
MTHFD1-202ENST00000545908 OFD1O75665 1012 aa10.64□□□□□ -0.71
MTHFD1-202ENST00000545908 ZSCAN31Q96LW9 406 aaPredicted RBP10.64□□□□□ -0.71
MTHFD1-202ENST00000545908 CABP5Q9NP86 173 aa10.64□□□□□ -0.71
MTHFD1-202ENST00000545908 FAM13BQ9NYF5 915 aa10.64□□□□□ -0.71
MTHFD1-202ENST00000545908 F8W031 263 aaPredicted RBP10.64□□□□□ -0.71
MTHFD1-202ENST00000545908 ZGPATQ8N5A5 531 aaKnown RBP10.64□□□□□ -0.71
MTHFD1-202ENST00000545908 POLKQ9UBT6 870 aa10.64□□□□□ -0.71
MTHFD1-202ENST00000545908 GOLIM4O00461 696 aa10.64□□□□□ -0.71
MTHFD1-202ENST00000545908 ZNF592Q92610 1267 aa10.64□□□□□ -0.71
MTHFD1-202ENST00000545908 UQCRFS1P1P0C7P4 283 aa10.63□□□□□ -0.71
MTHFD1-202ENST00000545908 GRM1Q13255 1194 aa10.63□□□□□ -0.71
MTHFD1-202ENST00000545908 RNF41Q9H4P4 317 aaPredicted RBP10.63□□□□□ -0.71
MTHFD1-202ENST00000545908 MAGI3Q5TCQ9 1506 aa10.63□□□□□ -0.71
MTHFD1-202ENST00000545908 SETQ01105 290 aaPredicted RBP10.63□□□□□ -0.71
MTHFD1-202ENST00000545908 IQCA1Q86XH1 822 aa10.63□□□□□ -0.71
MTHFD1-202ENST00000545908 PUS7Q96PZ0 661 aaKnown RBP10.63□□□□□ -0.71
MTHFD1-202ENST00000545908 TPTE2Q6XPS3 522 aa10.63□□□□□ -0.71
MTHFD1-202ENST00000545908 SSBP05455 408 aaKnown RBP eCLIP10.63□□□□□ -0.71
MTHFD1-202ENST00000545908 STIM1Q13586 685 aa10.63□□□□□ -0.71
MTHFD1-202ENST00000545908 LARP1BQ659C4 914 aaKnown RBP10.63□□□□□ -0.71
MTHFD1-202ENST00000545908 FILIP1LQ4L180 1135 aa10.62□□□□□ -0.71
MTHFD1-202ENST00000545908 PRPF40BQ6NWY9 871 aaKnown RBP10.62□□□□□ -0.71
MTHFD1-202ENST00000545908 ZNF526Q8TF50 670 aaPredicted RBP10.62□□□□□ -0.71
MTHFD1-202ENST00000545908 EVI5LQ96CN4 794 aa10.62□□□□□ -0.71
MTHFD1-202ENST00000545908 CRNKL1Q9BZJ0 848 aaKnown RBP10.62□□□□□ -0.71
MTHFD1-202ENST00000545908 CEP131Q9UPN4 1083 aa10.62□□□□□ -0.71
MTHFD1-202ENST00000545908 K7ELQ4 463 aaPredicted RBP10.62□□□□□ -0.71
MTHFD1-202ENST00000545908 HOMER1Q86YM7 354 aa10.62□□□□□ -0.71
MTHFD1-202ENST00000545908 EYA1Q99502 592 aa10.62□□□□□ -0.71
MTHFD1-202ENST00000545908 SBNO1A3KN83 1393 aa10.62□□□□□ -0.71
MTHFD1-202ENST00000545908 SCLT1Q96NL6 688 aa10.62□□□□□ -0.71
MTHFD1-202ENST00000545908 SLC12A7Q9Y666 1083 aa10.62□□□□□ -0.71
MTHFD1-202ENST00000545908 TRIM27P14373 513 aa10.62□□□□□ -0.71
MTHFD1-202ENST00000545908 LMOD1P29536 600 aaPredicted RBP10.62□□□□□ -0.71
MTHFD1-202ENST00000545908 ME1P48163 572 aa10.62□□□□□ -0.71
MTHFD1-202ENST00000545908 RIMBP2O15034 1052 aa10.61□□□□□ -0.71
MTHFD1-202ENST00000545908 APBA3O96018 575 aa10.61□□□□□ -0.71
MTHFD1-202ENST00000545908 MAGI2Q86UL8 1455 aa10.61□□□□□ -0.71
MTHFD1-202ENST00000545908 PIK3C2GO75747 1445 aa10.61□□□□□ -0.71
MTHFD1-202ENST00000545908 FIBPO43427 364 aa10.61□□□□□ -0.71
MTHFD1-202ENST00000545908 PDE4BQ07343 736 aa10.61□□□□□ -0.71
MTHFD1-202ENST00000545908 CATIPQ7Z7H3 387 aa10.61□□□□□ -0.71
MTHFD1-202ENST00000545908 OGFOD1Q8N543 542 aa10.61□□□□□ -0.71
MTHFD1-202ENST00000545908 CTCFLQ8NI51 663 aaPredicted RBP10.61□□□□□ -0.71
MTHFD1-202ENST00000545908 SMC2O95347 1197 aa10.61□□□□□ -0.71
MTHFD1-202ENST00000545908 BRPF1P55201 1214 aaPredicted RBP10.61□□□□□ -0.71
MTHFD1-202ENST00000545908 PPP4R3AQ6IN85 833 aa10.61□□□□□ -0.71
MTHFD1-202ENST00000545908 SSRP1Q08945 709 aaKnown RBP10.61□□□□□ -0.71
MTHFD1-202ENST00000545908 BMP2KQ9NSY1 1161 aaPredicted RBP10.61□□□□□ -0.71
MTHFD1-202ENST00000545908 DACH1Q9UI36 760 aa10.61□□□□□ -0.71
MTHFD1-202ENST00000545908 SNRKQ9NRH2 765 aa10.61□□□□□ -0.71
MTHFD1-202ENST00000545908 ERCC6L2Q5T890 1561 aa10.6□□□□□ -0.71
MTHFD1-202ENST00000545908 KSR2Q6VAB6 950 aa10.6□□□□□ -0.71
MTHFD1-202ENST00000545908 CEP57L1Q8IYX8 460 aa10.6□□□□□ -0.71
MTHFD1-202ENST00000545908 TANGO6Q9C0B7 1094 aa10.6□□□□□ -0.71
MTHFD1-202ENST00000545908 WDR33Q9C0J8 1336 aaKnown RBP10.6□□□□□ -0.71
MTHFD1-202ENST00000545908 GRM8O00222 908 aa10.6□□□□□ -0.71
MTHFD1-202ENST00000545908 IRS4O14654 1257 aaPredicted RBP10.6□□□□□ -0.71
MTHFD1-202ENST00000545908 IFIT3O14879 490 aaKnown RBP10.6□□□□□ -0.71
MTHFD1-202ENST00000545908 PICALMQ13492 652 aa10.6□□□□□ -0.71
MTHFD1-202ENST00000545908 JDP2Q8WYK2 163 aa10.6□□□□□ -0.71
MTHFD1-202ENST00000545908 MAP3K19Q56UN5 1328 aa10.6□□□□□ -0.71
MTHFD1-202ENST00000545908 NLRP1Q9C000 1473 aa10.6□□□□□ -0.71
MTHFD1-202ENST00000545908 HMGB1P09429 215 aaKnown RBP10.6□□□□□ -0.71
MTHFD1-202ENST00000545908 RBM26Q5T8P6 1007 aaKnown RBP10.6□□□□□ -0.71
MTHFD1-202ENST00000545908 DDX11Q96FC9 970 aa10.6□□□□□ -0.71
MTHFD1-202ENST00000545908 KAT14Q9H8E8 782 aa10.6□□□□□ -0.71
MTHFD1-202ENST00000545908 CCDC196A0A1B0GTZ2 297 aa10.59□□□□□ -0.71
MTHFD1-202ENST00000545908 NF2P35240 595 aa10.59□□□□□ -0.71
MTHFD1-202ENST00000545908 SMARCE1Q969G3 411 aa10.59□□□□□ -0.71
MTHFD1-202ENST00000545908 CDC42BPAQ5VT25 1732 aa10.59□□□□□ -0.71
MTHFD1-202ENST00000545908 MPHOSPH6Q99547 160 aaKnown RBP10.59□□□□□ -0.71
MTHFD1-202ENST00000545908 PRPF40AO75400 957 aaKnown RBP10.59□□□□□ -0.71
MTHFD1-202ENST00000545908 PLEKHG1Q9ULL1 1385 aa10.59□□□□□ -0.71
MTHFD1-202ENST00000545908 EYA3Q99504 573 aa10.59□□□□□ -0.71
MTHFD1-202ENST00000545908 TSPY2A6NKD2 308 aa10.59□□□□□ -0.71
MTHFD1-202ENST00000545908 CYP7A1P22680 504 aa10.59□□□□□ -0.71
MTHFD1-202ENST00000545908 LTKP29376 864 aa10.59□□□□□ -0.71
MTHFD1-202ENST00000545908 VEZTQ9HBM0 779 aa10.59□□□□□ -0.71
MTHFD1-202ENST00000545908 GOLGA8AA7E2F4 631 aa10.58□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms