RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 LGR5O75473 907 aa10.11□□□□□ -0.79
SNHG1-224ENST00000545688 HIRAP54198 1017 aaPredicted RBP10.11□□□□□ -0.79
SNHG1-224ENST00000545688 RASSF7Q02833 373 aa10.11□□□□□ -0.79
SNHG1-224ENST00000545688 ANKMY2Q8IV38 441 aa10.11□□□□□ -0.79
SNHG1-224ENST00000545688 SCARF2Q96GP6 870 aaPredicted RBP10.11□□□□□ -0.79
SNHG1-224ENST00000545688 ATAD2Q6PL18 1390 aa10.11□□□□□ -0.79
SNHG1-224ENST00000545688 IRS1P35568 1242 aa10.1□□□□□ -0.79
SNHG1-224ENST00000545688 GOLGA6L1Q8N7Z2 621 aa10.1□□□□□ -0.79
SNHG1-224ENST00000545688 GALNT6Q8NCL4 622 aa10.1□□□□□ -0.79
SNHG1-224ENST00000545688 SCG3Q8WXD2 468 aaKnown RBP10.1□□□□□ -0.79
SNHG1-224ENST00000545688 PHACTR1Q9C0D0 580 aa10.1□□□□□ -0.79
SNHG1-224ENST00000545688 STRN4Q9NRL3 753 aa10.1□□□□□ -0.79
SNHG1-224ENST00000545688 GGA1Q9UJY5 639 aa10.1□□□□□ -0.79
SNHG1-224ENST00000545688 EFSO43281 561 aa10.09□□□□□ -0.79
SNHG1-224ENST00000545688 FAM182BQ5T319 152 aa10.09□□□□□ -0.79
SNHG1-224ENST00000545688 HINFPQ9BQA5 517 aa10.09□□□□□ -0.79
SNHG1-224ENST00000545688 GPC6Q9Y625 555 aaPredicted RBP10.09□□□□□ -0.79
SNHG1-224ENST00000545688 CNTNAP5Q8WYK1 1306 aa10.08□□□□□ -0.8
SNHG1-224ENST00000545688 ARAFP10398 606 aa10.08□□□□□ -0.8
SNHG1-224ENST00000545688 CDCA8Q53HL2 280 aa10.08□□□□□ -0.8
SNHG1-224ENST00000545688 C1orf53Q5VUE5 145 aa10.08□□□□□ -0.8
SNHG1-224ENST00000545688 SLCO4C1Q6ZQN7 724 aa10.08□□□□□ -0.8
SNHG1-224ENST00000545688 TMEM151AQ8N4L1 468 aa10.08□□□□□ -0.8
SNHG1-224ENST00000545688 CHMP7Q8WUX9 453 aaPredicted RBP10.08□□□□□ -0.8
SNHG1-224ENST00000545688 EDARADDQ8WWZ3 215 aa10.08□□□□□ -0.8
SNHG1-224ENST00000545688 NEUROD4Q9HD90 331 aa10.08□□□□□ -0.8
SNHG1-224ENST00000545688 GDF11O95390 407 aa10.07□□□□□ -0.8
SNHG1-224ENST00000545688 RFX1P22670 979 aa10.07□□□□□ -0.8
SNHG1-224ENST00000545688 HSH2DQ96JZ2 352 aa10.07□□□□□ -0.8
SNHG1-224ENST00000545688 ARXQ96QS3 562 aa10.07□□□□□ -0.8
SNHG1-224ENST00000545688 C2orf49Q9BVC5 232 aaPredicted RBP10.07□□□□□ -0.8
SNHG1-224ENST00000545688 ZMYND15Q9H091 742 aa10.07□□□□□ -0.8
SNHG1-224ENST00000545688 DNMT3AQ9Y6K1 912 aaPredicted RBP10.07□□□□□ -0.8
SNHG1-224ENST00000545688 NEURL1BA8MQ27 555 aa10.06□□□□□ -0.8
SNHG1-224ENST00000545688 ALDH16A1Q8IZ83 802 aa10.06□□□□□ -0.8
SNHG1-224ENST00000545688 STAG2Q8N3U4 1231 aa10.06□□□□□ -0.8
SNHG1-224ENST00000545688 GAS2L2Q8NHY3 880 aa10.06□□□□□ -0.8
SNHG1-224ENST00000545688 MARK1Q9P0L2 795 aa10.06□□□□□ -0.8
SNHG1-224ENST00000545688 LAMC2Q13753 1193 aa10.05□□□□□ -0.8
SNHG1-224ENST00000545688 KANK3Q6NY19 840 aa10.05□□□□□ -0.8
SNHG1-224ENST00000545688 PODNQ7Z5L7 613 aa10.05□□□□□ -0.8
SNHG1-224ENST00000545688 KLF15Q9UIH9 416 aa10.05□□□□□ -0.8
SNHG1-224ENST00000545688 EPXP11678 715 aa10.04□□□□□ -0.8
SNHG1-224ENST00000545688 GRIN2CQ14957 1233 aa10.04□□□□□ -0.8
SNHG1-224ENST00000545688 KCTD17Q8N5Z5 321 aa10.04□□□□□ -0.8
SNHG1-224ENST00000545688 ZNF280CQ8ND82 737 aa10.04□□□□□ -0.8
SNHG1-224ENST00000545688 NGLY1Q96IV0 654 aa10.04□□□□□ -0.8
SNHG1-224ENST00000545688 GTF3C3Q9Y5Q9 886 aa10.04□□□□□ -0.8
SNHG1-224ENST00000545688 PHF20L1A8MW92 1017 aa10.03□□□□□ -0.8
SNHG1-224ENST00000545688 IGFBP4P22692 258 aa10.03□□□□□ -0.8
SNHG1-224ENST00000545688 ADH6P28332 368 aa10.03□□□□□ -0.8
SNHG1-224ENST00000545688 SNRPNP63162 240 aaKnown RBP10.03□□□□□ -0.8
SNHG1-224ENST00000545688 SFSWAPQ12872 951 aaKnown RBP10.03□□□□□ -0.8
SNHG1-224ENST00000545688 ZNF468Q5VIY5 522 aaPredicted RBP10.03□□□□□ -0.8
SNHG1-224ENST00000545688 BEND7Q8N7W2 519 aaPredicted RBP10.03□□□□□ -0.8
SNHG1-224ENST00000545688 SUSD3Q96L08 255 aa10.03□□□□□ -0.8
SNHG1-224ENST00000545688 PRR12Q9ULL5 1215 aa10.03□□□□□ -0.8
SNHG1-224ENST00000545688 PCBP4P57723 403 aaKnown RBP10.02□□□□□ -0.81
SNHG1-224ENST00000545688 FCHSD1Q86WN1 690 aa10.02□□□□□ -0.81
SNHG1-224ENST00000545688 RRAGCQ9HB90 399 aa10.02□□□□□ -0.81
SNHG1-224ENST00000545688 AVENQ9NQS1 362 aaPredicted RBP10.02□□□□□ -0.81
SNHG1-224ENST00000545688 ANKIB1Q9P2G1 1089 aa10.02□□□□□ -0.81
SNHG1-224ENST00000545688 AMPD1P23109 780 aa10.01□□□□□ -0.81
SNHG1-224ENST00000545688 FAM200AQ8TCP9 573 aa10.01□□□□□ -0.81
SNHG1-224ENST00000545688 CEP63Q96MT8 703 aa10.01□□□□□ -0.81
SNHG1-224ENST00000545688 NOVA2Q9UNW9 492 aaKnown RBP10.01□□□□□ -0.81
SNHG1-224ENST00000545688 HOXB4P17483 251 aaPredicted RBP10□□□□□ -0.81
SNHG1-224ENST00000545688 TYRO3Q06418 890 aa10□□□□□ -0.81
SNHG1-224ENST00000545688 BTBD6Q96KE9 485 aa10□□□□□ -0.81
SNHG1-224ENST00000545688 BRD7Q9NPI1 651 aa10□□□□□ -0.81
SNHG1-224ENST00000545688 WEE1P30291 646 aa9.99□□□□□ -0.81
SNHG1-224ENST00000545688 SLC30A3Q99726 388 aa9.99□□□□□ -0.81
SNHG1-224ENST00000545688 RTN1Q16799 776 aa9.98□□□□□ -0.81
SNHG1-224ENST00000545688 SYT9Q86SS6 491 aa9.98□□□□□ -0.81
SNHG1-224ENST00000545688 MKL2Q9ULH7 1088 aa9.98□□□□□ -0.81
SNHG1-224ENST00000545688 ZMIZ1Q9ULJ6 1067 aa9.98□□□□□ -0.81
SNHG1-224ENST00000545688 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.97□□□□□ -0.81
SNHG1-224ENST00000545688 SRPK2P78362 688 aaKnown RBP9.96□□□□□ -0.82
SNHG1-224ENST00000545688 SPEM2Q0P670 501 aa9.96□□□□□ -0.82
SNHG1-224ENST00000545688 HIF1AQ16665 826 aa9.96□□□□□ -0.82
SNHG1-224ENST00000545688 CHSY3Q70JA7 882 aa9.96□□□□□ -0.82
SNHG1-224ENST00000545688 BTLAQ7Z6A9 289 aa9.96□□□□□ -0.82
SNHG1-224ENST00000545688 RAB44Q7Z6P3 723 aaPredicted RBP9.96□□□□□ -0.82
SNHG1-224ENST00000545688 ARID3CA6NKF2 412 aa9.95□□□□□ -0.82
SNHG1-224ENST00000545688 FOXO3O43524 673 aa9.95□□□□□ -0.82
SNHG1-224ENST00000545688 KCNQ4P56696 695 aa9.95□□□□□ -0.82
SNHG1-224ENST00000545688 LINC00114Q6XXX2 140 aa9.95□□□□□ -0.82
SNHG1-224ENST00000545688 DCAF5Q96JK2 942 aa9.95□□□□□ -0.82
SNHG1-224ENST00000545688 KCNH4Q9UQ05 1017 aa9.95□□□□□ -0.82
SNHG1-224ENST00000545688 BCS1LQ9Y276 419 aa9.95□□□□□ -0.82
SNHG1-224ENST00000545688 DGKGP49619 791 aa9.94□□□□□ -0.82
SNHG1-224ENST00000545688 STK32AQ8WU08 396 aa9.94□□□□□ -0.82
SNHG1-224ENST00000545688 ACIN1Q9UKV3 1341 aaKnown RBP9.93□□□□□ -0.82
SNHG1-224ENST00000545688 TGFBR3LH3BV60 316 aa9.93□□□□□ -0.82
SNHG1-224ENST00000545688 ELOAQ14241 798 aaKnown RBP9.93□□□□□ -0.82
SNHG1-224ENST00000545688 IER5Q5VY09 327 aa9.93□□□□□ -0.82
SNHG1-224ENST00000545688 VTI1AQ96AJ9 217 aa9.93□□□□□ -0.82
SNHG1-224ENST00000545688 CCDC97Q96F63 343 aaPredicted RBP9.93□□□□□ -0.82
SNHG1-224ENST00000545688 MDFIQ99750 246 aa9.93□□□□□ -0.82
SNHG1-224ENST00000545688 QTRT2Q9H974 415 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms