RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 TLL2Q9Y6L7 1015 aa10.02□□□□□ -0.81
COPA-207ENST00000545284 BRPF1P55201 1214 aaPredicted RBP10.01□□□□□ -0.81
COPA-207ENST00000545284 GRIPAP1Q4V328 841 aa10.01□□□□□ -0.81
COPA-207ENST00000545284 TBC1D9BQ66K14 1250 aa10.01□□□□□ -0.81
COPA-207ENST00000545284 USP50Q70EL3 339 aaPredicted RBP10.01□□□□□ -0.81
COPA-207ENST00000545284 CFAP44Q96MT7 982 aa10.01□□□□□ -0.81
COPA-207ENST00000545284 DICER1Q9UPY3 1922 aaKnown RBP10.01□□□□□ -0.81
COPA-207ENST00000545284 FER1L6Q2WGJ9 1857 aa10□□□□□ -0.81
COPA-207ENST00000545284 RGL2O15211 777 aa10□□□□□ -0.81
COPA-207ENST00000545284 NPHP1O15259 732 aa10□□□□□ -0.81
COPA-207ENST00000545284 NPR1P16066 1061 aa10□□□□□ -0.81
COPA-207ENST00000545284 CANXP27824 592 aaKnown RBP10□□□□□ -0.81
COPA-207ENST00000545284 LMOD1P29536 600 aaPredicted RBP10□□□□□ -0.81
COPA-207ENST00000545284 IL6STP40189 918 aaPredicted RBP10□□□□□ -0.81
COPA-207ENST00000545284 CC2D2BQ6DHV5 1058 aa10□□□□□ -0.81
COPA-207ENST00000545284 NPM2Q86SE8 214 aaKnown RBP10□□□□□ -0.81
COPA-207ENST00000545284 JDP2Q8WYK2 163 aa10□□□□□ -0.81
COPA-207ENST00000545284 RNF123Q5XPI4 1314 aa10□□□□□ -0.81
COPA-207ENST00000545284 KIF20BQ96Q89 1820 aa10□□□□□ -0.81
COPA-207ENST00000545284 TJP1Q07157 1748 aa9.99□□□□□ -0.81
COPA-207ENST00000545284 ADAMTSL1Q8N6G6 1762 aa9.99□□□□□ -0.81
COPA-207ENST00000545284 AFDNP55196 1824 aaKnown RBP9.99□□□□□ -0.81
COPA-207ENST00000545284 ALDH1B1P30837 517 aa9.99□□□□□ -0.81
COPA-207ENST00000545284 IARSP41252 1262 aaKnown RBP9.99□□□□□ -0.81
COPA-207ENST00000545284 DGKZQ13574 1117 aa9.99□□□□□ -0.81
COPA-207ENST00000545284 CST9Q5W186 159 aa9.99□□□□□ -0.81
COPA-207ENST00000545284 CYP4F22Q6NT55 531 aa9.99□□□□□ -0.81
COPA-207ENST00000545284 CLEC4GQ6UXB4 293 aa9.99□□□□□ -0.81
COPA-207ENST00000545284 PAXIP1Q6ZW49 1069 aaPredicted RBP9.99□□□□□ -0.81
COPA-207ENST00000545284 PSMD1Q99460 953 aa9.99□□□□□ -0.81
COPA-207ENST00000545284 ZNF541Q9H0D2 1346 aa9.99□□□□□ -0.81
COPA-207ENST00000545284 THSD7BQ9C0I4 1608 aa9.99□□□□□ -0.81
COPA-207ENST00000545284 RNMTO43148 476 aaKnown RBP9.98□□□□□ -0.81
COPA-207ENST00000545284 EIF6P56537 245 aaKnown RBP9.98□□□□□ -0.81
COPA-207ENST00000545284 SLC39A6Q13433 755 aa9.98□□□□□ -0.81
COPA-207ENST00000545284 SULT6B1Q6IMI4 303 aa9.98□□□□□ -0.81
COPA-207ENST00000545284 SAPCD2Q86UD0 394 aa9.98□□□□□ -0.81
COPA-207ENST00000545284 GCC1Q96CN9 775 aa9.98□□□□□ -0.81
COPA-207ENST00000545284 NOGQ13253 232 aa9.97□□□□□ -0.81
COPA-207ENST00000545284 TPTE2Q6XPS3 522 aa9.97□□□□□ -0.81
COPA-207ENST00000545284 AEBP1Q8IUX7 1158 aa9.97□□□□□ -0.81
COPA-207ENST00000545284 TTC5Q8N0Z6 440 aa9.97□□□□□ -0.81
COPA-207ENST00000545284 LGR6Q9HBX8 967 aa9.97□□□□□ -0.81
COPA-207ENST00000545284 ZNF277Q9NRM2 450 aaPredicted RBP9.97□□□□□ -0.81
COPA-207ENST00000545284 CCDC88AQ3V6T2 1871 aa9.97□□□□□ -0.81
COPA-207ENST00000545284 MRC1P22897 1456 aa9.97□□□□□ -0.81
COPA-207ENST00000545284 CAMTA2O94983 1202 aa9.96□□□□□ -0.82
COPA-207ENST00000545284 TNNT2P45379 298 aaPredicted RBP9.96□□□□□ -0.82
COPA-207ENST00000545284 SYNE4Q8N205 404 aa9.96□□□□□ -0.82
COPA-207ENST00000545284 SAGE1Q9NXZ1 904 aa9.96□□□□□ -0.82
COPA-207ENST00000545284 SCNN1DP51172 638 aa9.95□□□□□ -0.82
COPA-207ENST00000545284 GRM1Q13255 1194 aa9.95□□□□□ -0.82
COPA-207ENST00000545284 NBPF5PQ86XG9 351 aaPredicted RBP9.95□□□□□ -0.82
COPA-207ENST00000545284 ZC3H15Q8WU90 426 aaKnown RBP9.95□□□□□ -0.82
COPA-207ENST00000545284 VPS33BQ9H267 617 aa9.95□□□□□ -0.82
COPA-207ENST00000545284 PGAP2Q9UHJ9 254 aa9.95□□□□□ -0.82
COPA-207ENST00000545284 TBC1D2BQ9UPU7 963 aa9.95□□□□□ -0.82
COPA-207ENST00000545284 ZNF652Q9Y2D9 606 aa9.95□□□□□ -0.82
COPA-207ENST00000545284 AOC2O75106 756 aa9.94□□□□□ -0.82
COPA-207ENST00000545284 IL13P35225 146 aa9.94□□□□□ -0.82
COPA-207ENST00000545284 ZNF790Q6PG37 636 aa9.94□□□□□ -0.82
COPA-207ENST00000545284 CCDC24Q8N4L8 307 aa9.94□□□□□ -0.82
COPA-207ENST00000545284 ADARB2Q9NS39 739 aaKnown RBP9.94□□□□□ -0.82
COPA-207ENST00000545284 TSKSQ9UJT2 592 aa9.94□□□□□ -0.82
COPA-207ENST00000545284 PDE4DIPQ5VU43 2346 aa9.93□□□□□ -0.82
COPA-207ENST00000545284 HEG1Q9ULI3 1381 aa9.93□□□□□ -0.82
COPA-207ENST00000545284 EPS15P42566 896 aa9.93□□□□□ -0.82
COPA-207ENST00000545284 ZNF496Q96IT1 587 aaPredicted RBP9.93□□□□□ -0.82
COPA-207ENST00000545284 SLX4Q8IY92 1834 aa9.93□□□□□ -0.82
COPA-207ENST00000545284 CELF2O95319 508 aaKnown RBP9.92□□□□□ -0.82
COPA-207ENST00000545284 CIAPIN1Q6FI81 312 aa9.92□□□□□ -0.82
COPA-207ENST00000545284 DZIP3Q86Y13 1208 aaKnown RBP9.92□□□□□ -0.82
COPA-207ENST00000545284 NBPF15Q8N660 670 aa9.92□□□□□ -0.82
COPA-207ENST00000545284 FMNL2Q96PY5 1086 aa9.92□□□□□ -0.82
COPA-207ENST00000545284 GJA3Q9Y6H8 435 aa9.92□□□□□ -0.82
COPA-207ENST00000545284 ANKRD31Q8N7Z5 1873 aa9.91□□□□□ -0.82
COPA-207ENST00000545284 CDHR2Q9BYE9 1310 aa9.91□□□□□ -0.82
COPA-207ENST00000545284 TRAF5O00463 557 aa9.91□□□□□ -0.82
COPA-207ENST00000545284 PKN2Q16513 984 aaKnown RBP9.91□□□□□ -0.82
COPA-207ENST00000545284 CRY2Q49AN0 593 aa9.91□□□□□ -0.82
COPA-207ENST00000545284 CDC37L1Q7L3B6 337 aa9.91□□□□□ -0.82
COPA-207ENST00000545284 REM2Q8IYK8 340 aaPredicted RBP9.91□□□□□ -0.82
COPA-207ENST00000545284 GPRC5DQ9NZD1 345 aa9.91□□□□□ -0.82
COPA-207ENST00000545284 ZNF330Q9Y3S2 320 aaPredicted RBP9.91□□□□□ -0.82
COPA-207ENST00000545284 SNED1Q8TER0 1413 aa9.9□□□□□ -0.82
COPA-207ENST00000545284 LTBP1Q14766 1721 aa9.9□□□□□ -0.82
COPA-207ENST00000545284 HOXA10P31260 410 aaPredicted RBP9.9□□□□□ -0.82
COPA-207ENST00000545284 FMR1Q06787 632 aaKnown RBP eCLIP9.9□□□□□ -0.828e-11■■■■□ 19.8
COPA-207ENST00000545284 TEFQ10587 303 aa9.9□□□□□ -0.82
COPA-207ENST00000545284 MTHFSDQ2M296 383 aaKnown RBP9.9□□□□□ -0.82
COPA-207ENST00000545284 MORC1Q86VD1 984 aa9.9□□□□□ -0.82
COPA-207ENST00000545284 LARGE2Q8N3Y3 721 aa9.9□□□□□ -0.82
COPA-207ENST00000545284 CCDC102AQ96A19 550 aa9.9□□□□□ -0.82
COPA-207ENST00000545284 SCN11AQ9UI33 1791 aa9.9□□□□□ -0.82
COPA-207ENST00000545284 TNRC18O15417 2968 aaPredicted RBP9.9□□□□□ -0.83
COPA-207ENST00000545284 KIF7Q2M1P5 1343 aa9.89□□□□□ -0.83
COPA-207ENST00000545284 ARFGEF2Q9Y6D5 1785 aa9.89□□□□□ -0.83
COPA-207ENST00000545284 A1BGP04217 495 aa9.89□□□□□ -0.83
COPA-207ENST00000545284 SOX10P56693 466 aa9.89□□□□□ -0.83
COPA-207ENST00000545284 OLFM4Q6UX06 510 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms