RNA–Protein interactions for RNA: ENST00000545225.5

PSME3-205, Transcript of proteasome activator subunit 3, humanhuman

TSL 2 BASIC

Gene PSME3, Length 3,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-205ENST00000545225 HSPA1LP34931 641 aa13.31□□□□□ -0.28
PSME3-205ENST00000545225 COPS6Q7L5N1 327 aa13.31□□□□□ -0.28
PSME3-205ENST00000545225 TJP1Q07157 1748 aa13.31□□□□□ -0.28
PSME3-205ENST00000545225 UTYO14607 1347 aa13.31□□□□□ -0.28
PSME3-205ENST00000545225 PTCD1O75127 700 aaKnown RBP13.31□□□□□ -0.28
PSME3-205ENST00000545225 UBTFL1P0CB47 393 aaPredicted RBP13.31□□□□□ -0.28
PSME3-205ENST00000545225 ATP8B2P98198 1209 aa13.31□□□□□ -0.28
PSME3-205ENST00000545225 NGLY1Q96IV0 654 aa13.31□□□□□ -0.28
PSME3-205ENST00000545225 LRRFIP2Q9Y608 721 aaKnown RBP13.31□□□□□ -0.28
PSME3-205ENST00000545225 CICQ96RK0 1608 aaPredicted RBP13.31□□□□□ -0.28
PSME3-205ENST00000545225 RRP9O43818 475 aaKnown RBP13.31□□□□□ -0.28
PSME3-205ENST00000545225 NBPF7P0C2Y1 421 aaPredicted RBP13.31□□□□□ -0.28
PSME3-205ENST00000545225 PIP4K2AP48426 406 aaPredicted RBP13.31□□□□□ -0.28
PSME3-205ENST00000545225 AIMP1Q12904 312 aaKnown RBP13.31□□□□□ -0.28
PSME3-205ENST00000545225 ANKRD45Q5TZF3 282 aa13.31□□□□□ -0.28
PSME3-205ENST00000545225 LINS1Q8NG48 757 aa13.31□□□□□ -0.28
PSME3-205ENST00000545225 IGKV5-2P06315 115 aa13.3□□□□□ -0.28
PSME3-205ENST00000545225 LNPKQ9C0E8 428 aa13.3□□□□□ -0.28
PSME3-205ENST00000545225 PNMA6EA0A0J9YXQ4 647 aa13.29□□□□□ -0.28
PSME3-205ENST00000545225 HMMRO75330 724 aa13.29□□□□□ -0.28
PSME3-205ENST00000545225 METTL22Q9BUU2 404 aaPredicted RBP13.29□□□□□ -0.28
PSME3-205ENST00000545225 CWF19L2Q2TBE0 894 aaKnown RBP13.29□□□□□ -0.28
PSME3-205ENST00000545225 ANKRD13DQ6ZTN6 518 aa13.29□□□□□ -0.28
PSME3-205ENST00000545225 SLC4A9Q96Q91 983 aa13.29□□□□□ -0.28
PSME3-205ENST00000545225 A1BGP04217 495 aa13.28□□□□□ -0.28
PSME3-205ENST00000545225 XRCC6P12956 609 aaKnown RBP eCLIP13.28□□□□□ -0.28
PSME3-205ENST00000545225 PRIM1P49642 420 aaKnown RBP13.28□□□□□ -0.28
PSME3-205ENST00000545225 POLA2Q14181 598 aa13.28□□□□□ -0.28
PSME3-205ENST00000545225 CCDC9Q9Y3X0 531 aaKnown RBP13.28□□□□□ -0.28
PSME3-205ENST00000545225 RIC3Q7Z5B4 369 aa13.28□□□□□ -0.28
PSME3-205ENST00000545225 AFDNP55196 1824 aaKnown RBP13.28□□□□□ -0.28
PSME3-205ENST00000545225 GOLGA6L3A6NEY3 463 aa13.28□□□□□ -0.28
PSME3-205ENST00000545225 PLBD2Q8NHP8 589 aa13.28□□□□□ -0.28
PSME3-205ENST00000545225 SSH3Q8TE77 659 aa13.28□□□□□ -0.28
PSME3-205ENST00000545225 TEX13AQ9BXU3 409 aaPredicted RBP13.28□□□□□ -0.28
PSME3-205ENST00000545225 NEURL1BA8MQ27 555 aa13.27□□□□□ -0.28
PSME3-205ENST00000545225 A0A0U1RQG5 324 aaPredicted RBP13.27□□□□□ -0.29
PSME3-205ENST00000545225 MTX1Q13505 466 aa13.27□□□□□ -0.29
PSME3-205ENST00000545225 FAM98CQ17RN3 349 aaKnown RBP13.27□□□□□ -0.29
PSME3-205ENST00000545225 USP21Q9UK80 565 aa13.27□□□□□ -0.29
PSME3-205ENST00000545225 RREB1Q92766 1687 aa13.27□□□□□ -0.29
PSME3-205ENST00000545225 DNAJC10Q8IXB1 793 aa13.26□□□□□ -0.29
PSME3-205ENST00000545225 ZNF831Q5JPB2 1677 aa13.26□□□□□ -0.29
PSME3-205ENST00000545225 GRM8O00222 908 aa13.26□□□□□ -0.29
PSME3-205ENST00000545225 ATRNO75882 1429 aa13.25□□□□□ -0.29
PSME3-205ENST00000545225 GCKRQ14397 625 aa13.25□□□□□ -0.29
PSME3-205ENST00000545225 TTLL7Q6ZT98 887 aa13.25□□□□□ -0.29
PSME3-205ENST00000545225 KAZALD1Q96I82 304 aa13.25□□□□□ -0.29
PSME3-205ENST00000545225 MYD88Q99836 296 aa13.25□□□□□ -0.29
PSME3-205ENST00000545225 CYP19A1P11511 503 aaPredicted RBP13.25□□□□□ -0.29
PSME3-205ENST00000545225 NEXNQ0ZGT2 675 aa13.25□□□□□ -0.29
PSME3-205ENST00000545225 PPP1R42Q7Z4L9 355 aa13.25□□□□□ -0.29
PSME3-205ENST00000545225 COL15A1P39059 1388 aa13.25□□□□□ -0.29
PSME3-205ENST00000545225 CLCN1P35523 988 aa13.24□□□□□ -0.29
PSME3-205ENST00000545225 PLEKHM2Q8IWE5 1019 aa13.24□□□□□ -0.29
PSME3-205ENST00000545225 C9orf78Q9NZ63 289 aaPredicted RBP13.24□□□□□ -0.29
PSME3-205ENST00000545225 SYTL4Q96C24 671 aaPredicted RBP13.24□□□□□ -0.29
PSME3-205ENST00000545225 RBM42Q9BTD8 480 aaKnown RBP13.24□□□□□ -0.29
PSME3-205ENST00000545225 BECN1Q14457 450 aa13.24□□□□□ -0.29
PSME3-205ENST00000545225 SUCLG2Q96I99 432 aa13.24□□□□□ -0.29
PSME3-205ENST00000545225 SEC24BO95487 1268 aa13.23□□□□□ -0.29
PSME3-205ENST00000545225 STARD3NLO95772 234 aa13.23□□□□□ -0.29
PSME3-205ENST00000545225 C16orf71Q8IYS4 520 aaPredicted RBP13.23□□□□□ -0.29
PSME3-205ENST00000545225 ACSBG1Q96GR2 724 aa13.23□□□□□ -0.29
PSME3-205ENST00000545225 EXOC6BQ9Y2D4 811 aa13.23□□□□□ -0.29
PSME3-205ENST00000545225 SMARCA5O60264 1052 aaPredicted RBP13.23□□□□□ -0.29
PSME3-205ENST00000545225 BMP2KLQ5H9B9 411 aa13.23□□□□□ -0.29
PSME3-205ENST00000545225 HDAC5Q9UQL6 1122 aa13.22□□□□□ -0.29
PSME3-205ENST00000545225 AFF2P51816 1311 aa13.22□□□□□ -0.29
PSME3-205ENST00000545225 SALL3Q9BXA9 1300 aa13.22□□□□□ -0.29
PSME3-205ENST00000545225 NHSQ6T4R5 1651 aa13.22□□□□□ -0.29
PSME3-205ENST00000545225 CASP7P55210 303 aa13.22□□□□□ -0.29
PSME3-205ENST00000545225 COL5A3P25940 1745 aaPredicted RBP13.22□□□□□ -0.29
PSME3-205ENST00000545225 SRGAP3O43295 1099 aa13.21□□□□□ -0.29
PSME3-205ENST00000545225 OTUD7AQ8TE49 926 aaPredicted RBP13.21□□□□□ -0.29
PSME3-205ENST00000545225 TUBGCP6Q96RT7 1819 aa13.21□□□□□ -0.29
PSME3-205ENST00000545225 ONECUT3O60422 494 aaPredicted RBP13.21□□□□□ -0.29
PSME3-205ENST00000545225 GJD4Q96KN9 370 aaPredicted RBP13.21□□□□□ -0.29
PSME3-205ENST00000545225 KCNQ2O43526 872 aa13.21□□□□□ -0.3
PSME3-205ENST00000545225 MEX3CQ5U5Q3 659 aaKnown RBP13.21□□□□□ -0.3
PSME3-205ENST00000545225 LRRCC1Q9C099 1032 aa13.21□□□□□ -0.3
PSME3-205ENST00000545225 BICC1Q9H694 974 aaKnown RBP13.21□□□□□ -0.3
PSME3-205ENST00000545225 RAB11FIP3O75154 756 aa13.2□□□□□ -0.3
PSME3-205ENST00000545225 ATP5J2-PTCD1G3V325 749 aa13.2□□□□□ -0.3
PSME3-205ENST00000545225 GSPT1P15170 499 aaKnown RBP13.2□□□□□ -0.3
PSME3-205ENST00000545225 OSBPL3Q9H4L5 887 aa13.2□□□□□ -0.3
PSME3-205ENST00000545225 PALLDQ8WX93 1383 aa13.2□□□□□ -0.3
PSME3-205ENST00000545225 ANKRD36CQ5JPF3 1778 aa13.19□□□□□ -0.3
PSME3-205ENST00000545225 APBB1O00213 710 aa13.19□□□□□ -0.3
PSME3-205ENST00000545225 EPHA10Q5JZY3 1008 aa13.19□□□□□ -0.3
PSME3-205ENST00000545225 ARID3AQ99856 593 aa13.19□□□□□ -0.3
PSME3-205ENST00000545225 H7C1W4 665 aa13.19□□□□□ -0.3
PSME3-205ENST00000545225 ISCA1Q9BUE6 129 aa13.19□□□□□ -0.3
PSME3-205ENST00000545225 ZBTB3Q9H5J0 574 aa13.19□□□□□ -0.3
PSME3-205ENST00000545225 TTC22Q5TAA0 569 aa13.19□□□□□ -0.3
PSME3-205ENST00000545225 ZBTB1Q9Y2K1 713 aa13.19□□□□□ -0.3
PSME3-205ENST00000545225 BTAF1O14981 1849 aa13.18□□□□□ -0.3
PSME3-205ENST00000545225 LOC102724428A0A0B4J2F2 783 aa13.18□□□□□ -0.3
PSME3-205ENST00000545225 SIK1P57059 783 aa13.18□□□□□ -0.3
PSME3-205ENST00000545225 RABL6Q3YEC7 729 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms