RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 TEX13AQ9BXU3 409 aaPredicted RBP8.86□□□□□ -0.99
HMGCS2-204ENST00000544913 CHMP4AQ9BY43 222 aa8.86□□□□□ -0.99
HMGCS2-204ENST00000544913 LRRC4BQ9NT99 713 aa8.86□□□□□ -0.99
HMGCS2-204ENST00000544913 TRIM37O94972 964 aa8.86□□□□□ -0.99
HMGCS2-204ENST00000544913 IGKV5-2P06315 115 aa8.86□□□□□ -0.99
HMGCS2-204ENST00000544913 EIF5P55010 431 aaKnown RBP8.86□□□□□ -0.99
HMGCS2-204ENST00000544913 PROM2Q8N271 834 aa8.86□□□□□ -0.99
HMGCS2-204ENST00000544913 DNAAF4Q8WXU2 420 aa8.86□□□□□ -0.99
HMGCS2-204ENST00000544913 MEIS3Q99687 375 aa8.86□□□□□ -0.99
HMGCS2-204ENST00000544913 ATP6V1AP38606 617 aa8.85□□□□□ -0.99
HMGCS2-204ENST00000544913 CRKLP46109 303 aaKnown RBP8.85□□□□□ -0.99
HMGCS2-204ENST00000544913 DDX19BQ9UMR2 479 aa8.85□□□□□ -0.99
HMGCS2-204ENST00000544913 MAP3K2Q9Y2U5 619 aa8.85□□□□□ -0.99
HMGCS2-204ENST00000544913 CNTNAP4Q9C0A0 1308 aa8.85□□□□□ -0.99
HMGCS2-204ENST00000544913 C4BP0C0L5 1744 aa8.85□□□□□ -0.99
HMGCS2-204ENST00000544913 RGPD3A6NKT7 1758 aaPredicted RBP8.84□□□□□ -0.99
HMGCS2-204ENST00000544913 RGPD4Q7Z3J3 1758 aa8.84□□□□□ -0.99
HMGCS2-204ENST00000544913 STARD3NLO95772 234 aa8.84□□□□□ -0.99
HMGCS2-204ENST00000544913 CENPQQ7L2Z9 268 aaPredicted RBP8.84□□□□□ -0.99
HMGCS2-204ENST00000544913 SIRT2Q8IXJ6 389 aa8.84□□□□□ -0.99
HMGCS2-204ENST00000544913 USP44Q9H0E7 712 aa8.84□□□□□ -0.99
HMGCS2-204ENST00000544913 CCDC87Q9NVE4 849 aa8.84□□□□□ -0.99
HMGCS2-204ENST00000544913 IGHDP01880 384 aa8.84□□□□□ -1
HMGCS2-204ENST00000544913 IL6STP40189 918 aaPredicted RBP8.84□□□□□ -1
HMGCS2-204ENST00000544913 CCT4P50991 539 aaKnown RBP8.84□□□□□ -1
HMGCS2-204ENST00000544913 AIMP1Q12904 312 aaKnown RBP8.84□□□□□ -1
HMGCS2-204ENST00000544913 SLC4A10Q6U841 1118 aa8.84□□□□□ -1
HMGCS2-204ENST00000544913 PLBD2Q8NHP8 589 aa8.84□□□□□ -1
HMGCS2-204ENST00000544913 BCORQ6W2J9 1755 aa8.83□□□□□ -1
HMGCS2-204ENST00000544913 CWF19L2Q2TBE0 894 aaKnown RBP8.83□□□□□ -1
HMGCS2-204ENST00000544913 ANKRD13DQ6ZTN6 518 aa8.83□□□□□ -1
HMGCS2-204ENST00000544913 SMIM5Q71RC9 77 aa8.83□□□□□ -1
HMGCS2-204ENST00000544913 METTL22Q9BUU2 404 aaPredicted RBP8.83□□□□□ -1
HMGCS2-204ENST00000544913 C1orf115Q9H7X2 142 aa8.83□□□□□ -1
HMGCS2-204ENST00000544913 CCNL1Q9UK58 526 aaPredicted RBP8.83□□□□□ -1
HMGCS2-204ENST00000544913 SCN7AQ01118 1682 aa8.83□□□□□ -1
HMGCS2-204ENST00000544913 UBR3Q6ZT12 1888 aa8.83□□□□□ -1
HMGCS2-204ENST00000544913 UTYO14607 1347 aa8.83□□□□□ -1
HMGCS2-204ENST00000544913 ANP32AP39687 249 aaKnown RBP8.82□□□□□ -1
HMGCS2-204ENST00000544913 CASP7P55210 303 aa8.82□□□□□ -1
HMGCS2-204ENST00000544913 LINS1Q8NG48 757 aa8.82□□□□□ -1
HMGCS2-204ENST00000544913 KAZALD1Q96I82 304 aa8.82□□□□□ -1
HMGCS2-204ENST00000544913 C4AP0C0L4 1744 aa8.82□□□□□ -1
HMGCS2-204ENST00000544913 ANKRD36CQ5JPF3 1778 aa8.82□□□□□ -1
HMGCS2-204ENST00000544913 NEURL1BA8MQ27 555 aa8.82□□□□□ -1
HMGCS2-204ENST00000544913 ALDH1L1O75891 902 aa8.82□□□□□ -1
HMGCS2-204ENST00000544913 CAMTA2O94983 1202 aa8.82□□□□□ -1
HMGCS2-204ENST00000544913 NBPF7P0C2Y1 421 aaPredicted RBP8.82□□□□□ -1
HMGCS2-204ENST00000544913 HLFQ16534 295 aa8.82□□□□□ -1
HMGCS2-204ENST00000544913 RC3H1Q5TC82 1133 aaKnown RBP8.82□□□□□ -1
HMGCS2-204ENST00000544913 SRCIN1Q9C0H9 1055 aa8.82□□□□□ -1
HMGCS2-204ENST00000544913 ZBTB3Q9H5J0 574 aa8.82□□□□□ -1
HMGCS2-204ENST00000544913 NUP98P52948 1817 aa8.81□□□□□ -1
HMGCS2-204ENST00000544913 MAP3K15Q6ZN16 1313 aa8.81□□□□□ -1
HMGCS2-204ENST00000544913 COL15A1P39059 1388 aa8.81□□□□□ -1
HMGCS2-204ENST00000544913 PLSCR1O15162 318 aa8.81□□□□□ -1
HMGCS2-204ENST00000544913 DDX58O95786 925 aaKnown RBP8.81□□□□□ -1
HMGCS2-204ENST00000544913 ISCA1Q9BUE6 129 aa8.81□□□□□ -1
HMGCS2-204ENST00000544913 AFDNP55196 1824 aaKnown RBP8.81□□□□□ -1
HMGCS2-204ENST00000544913 TUBGCP6Q96RT7 1819 aa8.81□□□□□ -1
HMGCS2-204ENST00000544913 HDAC1Q13547 482 aaPredicted RBP8.8□□□□□ -1
HMGCS2-204ENST00000544913 GCKRQ14397 625 aa8.8□□□□□ -1
HMGCS2-204ENST00000544913 TXNRD1Q16881 649 aa8.8□□□□□ -1
HMGCS2-204ENST00000544913 CEP85Q6P2H3 762 aa8.8□□□□□ -1
HMGCS2-204ENST00000544913 RIC3Q7Z5B4 369 aa8.8□□□□□ -1
HMGCS2-204ENST00000544913 MYD88Q99836 296 aa8.8□□□□□ -1
HMGCS2-204ENST00000544913 BCL2L12Q9HB09 334 aa8.8□□□□□ -1
HMGCS2-204ENST00000544913 ATP5J2-PTCD1G3V325 749 aa8.8□□□□□ -1
HMGCS2-204ENST00000544913 GIGYF2Q6Y7W6 1299 aaKnown RBP8.8□□□□□ -1
HMGCS2-204ENST00000544913 TBC1D2BQ9UPU7 963 aa8.8□□□□□ -1
HMGCS2-204ENST00000544913 UBN2Q6ZU65 1347 aa8.8□□□□□ -1
HMGCS2-204ENST00000544913 ERVV-1B6SEH8 477 aa8.79□□□□□ -1
HMGCS2-204ENST00000544913 RPS6KA4O75676 772 aa8.79□□□□□ -1
HMGCS2-204ENST00000544913 TRIM28Q13263 835 aaKnown RBP8.79□□□□□ -1
HMGCS2-204ENST00000544913 TCIRG1Q13488 830 aa8.79□□□□□ -1
HMGCS2-204ENST00000544913 ZNF827Q17R98 1081 aa8.79□□□□□ -1
HMGCS2-204ENST00000544913 SLC27A3Q5K4L6 730 aa8.79□□□□□ -1
HMGCS2-204ENST00000544913 SKAP1Q86WV1 359 aa8.79□□□□□ -1
HMGCS2-204ENST00000544913 DZIP3Q86Y13 1208 aaKnown RBP8.79□□□□□ -1
HMGCS2-204ENST00000544913 GRM8O00222 908 aa8.78□□□□□ -1
HMGCS2-204ENST00000544913 COL24A1Q17RW2 1714 aa8.78□□□□□ -1
HMGCS2-204ENST00000544913 EPHA10Q5JZY3 1008 aa8.78□□□□□ -1
HMGCS2-204ENST00000544913 ZNF34Q8IZ26 560 aa8.78□□□□□ -1
HMGCS2-204ENST00000544913 ANKRD44Q8N8A2 993 aa8.78□□□□□ -1
HMGCS2-204ENST00000544913 CAMKK2Q96RR4 588 aa8.78□□□□□ -1
HMGCS2-204ENST00000544913 BACH2Q9BYV9 841 aa8.78□□□□□ -1
HMGCS2-204ENST00000544913 ZNF330Q9Y3S2 320 aaPredicted RBP8.78□□□□□ -1
HMGCS2-204ENST00000544913 LRRFIP2Q9Y608 721 aaKnown RBP8.78□□□□□ -1
HMGCS2-204ENST00000544913 PNMA6EA0A0J9YXQ4 647 aa8.78□□□□□ -1
HMGCS2-204ENST00000544913 H7C1W4 665 aa8.78□□□□□ -1
HMGCS2-204ENST00000544913 APBA3O96018 575 aa8.78□□□□□ -1
HMGCS2-204ENST00000544913 PDE4AP27815 886 aa8.78□□□□□ -1
HMGCS2-204ENST00000544913 SMC5Q8IY18 1101 aa8.78□□□□□ -1
HMGCS2-204ENST00000544913 AKT1S1Q96B36 256 aa8.78□□□□□ -1
HMGCS2-204ENST00000544913 SUCLG2Q96I99 432 aa8.78□□□□□ -1
HMGCS2-204ENST00000544913 IPO9Q96P70 1041 aaKnown RBP8.78□□□□□ -1
HMGCS2-204ENST00000544913 GNPATO15228 680 aa8.77□□□□□ -1.01
HMGCS2-204ENST00000544913 GNAI3P08754 354 aa8.77□□□□□ -1.01
HMGCS2-204ENST00000544913 MTX1Q13505 466 aa8.77□□□□□ -1.01
HMGCS2-204ENST00000544913 NLRP10Q86W26 655 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms