RNA–Protein interactions for RNA: ENST00000544409.5

LRTOMT-221, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-221ENST00000544409 PKP1Q13835 747 aa14.85□□□□□ -0.03
LRTOMT-221ENST00000544409 NLRP2Q9NX02 1062 aa14.85□□□□□ -0.03
LRTOMT-221ENST00000544409 OFD1O75665 1012 aa14.84□□□□□ -0.03
LRTOMT-221ENST00000544409 TATP17735 454 aaPredicted RBP14.84□□□□□ -0.03
LRTOMT-221ENST00000544409 ERC1Q8IUD2 1116 aa14.84□□□□□ -0.03
LRTOMT-221ENST00000544409 LINS1Q8NG48 757 aa14.84□□□□□ -0.03
LRTOMT-221ENST00000544409 CLASRPQ8N2M8 674 aaKnown RBP14.84□□□□□ -0.03
LRTOMT-221ENST00000544409 CRYBG1Q9Y4K1 1723 aa14.83□□□□□ -0.03
LRTOMT-221ENST00000544409 GLRX3O76003 335 aaKnown RBP14.83□□□□□ -0.03
LRTOMT-221ENST00000544409 CWF19L2Q2TBE0 894 aaKnown RBP14.83□□□□□ -0.03
LRTOMT-221ENST00000544409 HSPA4P34932 840 aa14.83□□□□□ -0.04
LRTOMT-221ENST00000544409 CUL4AQ13619 759 aa14.83□□□□□ -0.04
LRTOMT-221ENST00000544409 SPG7Q9UQ90 795 aa14.83□□□□□ -0.04
LRTOMT-221ENST00000544409 NPHP3Q7Z494 1330 aa14.83□□□□□ -0.04
LRTOMT-221ENST00000544409 SGSM2O43147 1006 aa14.83□□□□□ -0.04
LRTOMT-221ENST00000544409 MSNP26038 577 aaKnown RBP14.83□□□□□ -0.04
LRTOMT-221ENST00000544409 IL25Q9H293 177 aa14.83□□□□□ -0.04
LRTOMT-221ENST00000544409 SLC52A2Q9HAB3 445 aa14.83□□□□□ -0.04
LRTOMT-221ENST00000544409 GRM8O00222 908 aa14.82□□□□□ -0.04
LRTOMT-221ENST00000544409 ZNF790Q6PG37 636 aa14.82□□□□□ -0.04
LRTOMT-221ENST00000544409 ZSCAN30Q86W11 494 aa14.82□□□□□ -0.04
LRTOMT-221ENST00000544409 GPATCH3Q96I76 525 aa14.82□□□□□ -0.04
LRTOMT-221ENST00000544409 RAD50Q92878 1312 aa14.82□□□□□ -0.04
LRTOMT-221ENST00000544409 AIMP1Q12904 312 aaKnown RBP14.82□□□□□ -0.04
LRTOMT-221ENST00000544409 INTS4Q96HW7 963 aaKnown RBP14.82□□□□□ -0.04
LRTOMT-221ENST00000544409 ZDHHC9Q9Y397 364 aa14.82□□□□□ -0.04
LRTOMT-221ENST00000544409 ABCC6O95255 1503 aa14.82□□□□□ -0.04
LRTOMT-221ENST00000544409 KDM6AO15550 1401 aaPredicted RBP14.81□□□□□ -0.04
LRTOMT-221ENST00000544409 PHKG2P15735 406 aa14.81□□□□□ -0.04
LRTOMT-221ENST00000544409 LMBRD1Q9NUN5 540 aa14.81□□□□□ -0.04
LRTOMT-221ENST00000544409 C5P01031 1676 aa14.81□□□□□ -0.04
LRTOMT-221ENST00000544409 UTYO14607 1347 aa14.81□□□□□ -0.04
LRTOMT-221ENST00000544409 DCCP43146 1447 aa14.81□□□□□ -0.04
LRTOMT-221ENST00000544409 PDIA6Q15084 440 aa14.81□□□□□ -0.04
LRTOMT-221ENST00000544409 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.81□□□□□ -0.04
LRTOMT-221ENST00000544409 TMEM94Q12767 1356 aa14.81□□□□□ -0.04
LRTOMT-221ENST00000544409 COL18A1P39060 1754 aa14.81□□□□□ -0.04
LRTOMT-221ENST00000544409 IFIT2P09913 472 aaKnown RBP14.81□□□□□ -0.04
LRTOMT-221ENST00000544409 CSB-PGBD3P0DP91 1061 aa14.81□□□□□ -0.04
LRTOMT-221ENST00000544409 ECHDC1Q9NTX5 307 aa14.81□□□□□ -0.04
LRTOMT-221ENST00000544409 SLC39A6Q13433 755 aa14.8□□□□□ -0.04
LRTOMT-221ENST00000544409 LARP1Q6PKG0 1096 aaKnown RBP14.8□□□□□ -0.04
LRTOMT-221ENST00000544409 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.8□□□□□ -0.04
LRTOMT-221ENST00000544409 NOL8Q76FK4 1167 aaKnown RBP14.8□□□□□ -0.04
LRTOMT-221ENST00000544409 RIC3Q7Z5B4 369 aa14.8□□□□□ -0.04
LRTOMT-221ENST00000544409 SUCLG2Q96I99 432 aa14.8□□□□□ -0.04
LRTOMT-221ENST00000544409 MAP7D2Q96T17 732 aa14.8□□□□□ -0.04
LRTOMT-221ENST00000544409 UPF3BQ9BZI7 483 aaKnown RBP14.8□□□□□ -0.04
LRTOMT-221ENST00000544409 PA2G4Q9UQ80 394 aaKnown RBP14.8□□□□□ -0.04
LRTOMT-221ENST00000544409 IFNL2Q8IZJ0 200 aa14.8□□□□□ -0.04
LRTOMT-221ENST00000544409 RUFY2Q8WXA3 655 aa14.79□□□□□ -0.04
LRTOMT-221ENST00000544409 LSG1Q9H089 658 aaKnown RBP14.79□□□□□ -0.04
LRTOMT-221ENST00000544409 DIAPH3Q9NSV4 1193 aa14.79□□□□□ -0.04
LRTOMT-221ENST00000544409 MEGF6O75095 1541 aa14.79□□□□□ -0.04
LRTOMT-221ENST00000544409 PLEKHG2Q9H7P9 1386 aa14.79□□□□□ -0.04
LRTOMT-221ENST00000544409 NCLP19338 710 aaKnown RBP14.79□□□□□ -0.04
LRTOMT-221ENST00000544409 NEXNQ0ZGT2 675 aa14.79□□□□□ -0.04
LRTOMT-221ENST00000544409 SMAP1Q8IYB5 467 aaPredicted RBP14.79□□□□□ -0.04
LRTOMT-221ENST00000544409 G3BP1Q13283 466 aaKnown RBP eCLIP14.79□□□□□ -0.04
LRTOMT-221ENST00000544409 CWC27Q6UX04 472 aaKnown RBP14.79□□□□□ -0.04
LRTOMT-221ENST00000544409 NFATC2IPQ8NCF5 419 aa14.79□□□□□ -0.04
LRTOMT-221ENST00000544409 DDX17Q92841 729 aaKnown RBP14.79□□□□□ -0.04
LRTOMT-221ENST00000544409 BICC1Q9H694 974 aaKnown RBP14.78□□□□□ -0.04
LRTOMT-221ENST00000544409 TNS3Q68CZ2 1445 aa14.78□□□□□ -0.04
LRTOMT-221ENST00000544409 AACSQ86V21 672 aa14.78□□□□□ -0.04
LRTOMT-221ENST00000544409 SNX14Q9Y5W7 946 aa14.78□□□□□ -0.04
LRTOMT-221ENST00000544409 STRCP1A6NGW2 1772 aa14.78□□□□□ -0.04
LRTOMT-221ENST00000544409 UQCRHLA0A096LP55 91 aa14.77□□□□□ -0.04
LRTOMT-221ENST00000544409 PRPF40AO75400 957 aaKnown RBP14.77□□□□□ -0.04
LRTOMT-221ENST00000544409 BRD1O95696 1058 aa14.77□□□□□ -0.04
LRTOMT-221ENST00000544409 UQCRHP07919 91 aa14.77□□□□□ -0.04
LRTOMT-221ENST00000544409 MYL6BP14649 208 aa14.77□□□□□ -0.04
LRTOMT-221ENST00000544409 NASPP49321 788 aaPredicted RBP14.77□□□□□ -0.04
LRTOMT-221ENST00000544409 CCDC173Q0VFZ6 552 aa14.77□□□□□ -0.04
LRTOMT-221ENST00000544409 KAZALD1Q96I82 304 aa14.77□□□□□ -0.04
LRTOMT-221ENST00000544409 IGKV5-2P06315 115 aa14.77□□□□□ -0.05
LRTOMT-221ENST00000544409 TTC5Q8N0Z6 440 aa14.77□□□□□ -0.05
LRTOMT-221ENST00000544409 ANP32BQ92688 251 aaKnown RBP14.77□□□□□ -0.05
LRTOMT-221ENST00000544409 MRC1P22897 1456 aa14.77□□□□□ -0.05
LRTOMT-221ENST00000544409 XAGE3Q8WTP9 111 aa14.77□□□□□ -0.05
LRTOMT-221ENST00000544409 CAVIN1Q6NZI2 390 aaKnown RBP14.76□□□□□ -0.05
LRTOMT-221ENST00000544409 CADPS2Q86UW7 1296 aa14.76□□□□□ -0.05
LRTOMT-221ENST00000544409 EVI5LQ96CN4 794 aa14.76□□□□□ -0.05
LRTOMT-221ENST00000544409 DCAF5Q96JK2 942 aa14.76□□□□□ -0.05
LRTOMT-221ENST00000544409 NEURL1BA8MQ27 555 aa14.76□□□□□ -0.05
LRTOMT-221ENST00000544409 ZNF445P59923 1031 aa14.76□□□□□ -0.05
LRTOMT-221ENST00000544409 FOXD4L5Q5VV16 416 aaPredicted RBP14.76□□□□□ -0.05
LRTOMT-221ENST00000544409 CABLES1Q8TDN4 633 aa14.76□□□□□ -0.05
LRTOMT-221ENST00000544409 FOXD4L4Q8WXT5 416 aaPredicted RBP14.76□□□□□ -0.05
LRTOMT-221ENST00000544409 BBXQ8WY36 941 aaPredicted RBP14.76□□□□□ -0.05
LRTOMT-221ENST00000544409 ZNF496Q96IT1 587 aaPredicted RBP14.76□□□□□ -0.05
LRTOMT-221ENST00000544409 METTL22Q9BUU2 404 aaPredicted RBP14.76□□□□□ -0.05
LRTOMT-221ENST00000544409 PKD1L3Q7Z443 1732 aa14.76□□□□□ -0.05
LRTOMT-221ENST00000544409 SNRPA1P09661 255 aaKnown RBP14.75□□□□□ -0.05
LRTOMT-221ENST00000544409 COPS6Q7L5N1 327 aa14.75□□□□□ -0.05
LRTOMT-221ENST00000544409 SASH1O94885 1247 aa14.75□□□□□ -0.05
LRTOMT-221ENST00000544409 CHRNA2Q15822 529 aa14.75□□□□□ -0.05
LRTOMT-221ENST00000544409 MYD88Q99836 296 aa14.75□□□□□ -0.05
LRTOMT-221ENST00000544409 GCKRQ14397 625 aa14.75□□□□□ -0.05
LRTOMT-221ENST00000544409 ZSCAN23Q3MJ62 389 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms