RNA–Protein interactions for RNA: ENST00000544381.3

MDH1-216, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-216ENST00000544381 FANCIQ9NVI1 1328 aa12.96□□□□□ -0.33
MDH1-216ENST00000544381 GNAI1P63096 354 aa12.96□□□□□ -0.33
MDH1-216ENST00000544381 SLC15A2Q16348 729 aa12.96□□□□□ -0.33
MDH1-216ENST00000544381 MTHFSDQ2M296 383 aaKnown RBP12.96□□□□□ -0.33
MDH1-216ENST00000544381 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.96□□□□□ -0.33
MDH1-216ENST00000544381 CARD10Q9BWT7 1032 aa12.96□□□□□ -0.33
MDH1-216ENST00000544381 LAS1LQ9Y4W2 734 aaKnown RBP12.96□□□□□ -0.33
MDH1-216ENST00000544381 RGPD2P0DJD1 1756 aa12.95□□□□□ -0.34
MDH1-216ENST00000544381 SPNS2Q8IVW8 549 aa12.95□□□□□ -0.34
MDH1-216ENST00000544381 OXER1Q8TDS5 423 aa12.95□□□□□ -0.34
MDH1-216ENST00000544381 RTF1Q92541 710 aaKnown RBP12.95□□□□□ -0.34
MDH1-216ENST00000544381 TSR2Q969E8 191 aaKnown RBP12.95□□□□□ -0.34
MDH1-216ENST00000544381 THUMPD2Q9BTF0 503 aaKnown RBP12.95□□□□□ -0.34
MDH1-216ENST00000544381 IFT57Q9NWB7 429 aa12.95□□□□□ -0.34
MDH1-216ENST00000544381 MAP3K5Q99683 1374 aa12.95□□□□□ -0.34
MDH1-216ENST00000544381 CT47B1P0C2W7 299 aaPredicted RBP12.94□□□□□ -0.34
MDH1-216ENST00000544381 CSB-PGBD3P0DP91 1061 aa12.94□□□□□ -0.34
MDH1-216ENST00000544381 MFSD10Q14728 455 aa12.94□□□□□ -0.34
MDH1-216ENST00000544381 PAXIP1Q6ZW49 1069 aaPredicted RBP12.94□□□□□ -0.34
MDH1-216ENST00000544381 CFAP44Q96MT7 982 aa12.94□□□□□ -0.34
MDH1-216ENST00000544381 SHANK3Q9BYB0 1731 aa12.94□□□□□ -0.34
MDH1-216ENST00000544381 HTATSF1O43719 755 aaKnown RBP12.93□□□□□ -0.34
MDH1-216ENST00000544381 EXOSC9Q06265 439 aaKnown RBP12.93□□□□□ -0.34
MDH1-216ENST00000544381 DCTN1Q14203 1278 aa12.93□□□□□ -0.34
MDH1-216ENST00000544381 ZNF827Q17R98 1081 aa12.93□□□□□ -0.34
MDH1-216ENST00000544381 CDCA7Q9BWT1 371 aaPredicted RBP12.93□□□□□ -0.34
MDH1-216ENST00000544381 MTFR1LQ9H019 292 aa12.93□□□□□ -0.34
MDH1-216ENST00000544381 NLRP2Q9NX02 1062 aa12.93□□□□□ -0.34
MDH1-216ENST00000544381 GNAT3A8MTJ3 354 aa12.92□□□□□ -0.34
MDH1-216ENST00000544381 PLEKHO1Q53GL0 409 aaPredicted RBP12.92□□□□□ -0.34
MDH1-216ENST00000544381 MCM10Q7L590 875 aa12.92□□□□□ -0.34
MDH1-216ENST00000544381 PPP4R2Q9NY27 417 aa12.92□□□□□ -0.34
MDH1-216ENST00000544381 STK32BQ9NY57 414 aa12.92□□□□□ -0.34
MDH1-216ENST00000544381 PLIN1O60240 522 aa12.91□□□□□ -0.34
MDH1-216ENST00000544381 ZNF853P0CG23 659 aa12.91□□□□□ -0.34
MDH1-216ENST00000544381 AMOTQ4VCS5 1084 aa12.91□□□□□ -0.34
MDH1-216ENST00000544381 LRRC4BQ9NT99 713 aa12.91□□□□□ -0.34
MDH1-216ENST00000544381 FAM208AQ9UK61 1670 aaKnown RBP12.91□□□□□ -0.34
MDH1-216ENST00000544381 KAT6BQ8WYB5 2073 aa12.91□□□□□ -0.34
MDH1-216ENST00000544381 NCAPD2Q15021 1401 aa12.91□□□□□ -0.34
MDH1-216ENST00000544381 BCAR3O75815 825 aa12.9□□□□□ -0.34
MDH1-216ENST00000544381 CANXP27824 592 aaKnown RBP12.9□□□□□ -0.34
MDH1-216ENST00000544381 RARSP54136 660 aaKnown RBP12.9□□□□□ -0.34
MDH1-216ENST00000544381 MBIPQ9NS73 344 aa12.9□□□□□ -0.34
MDH1-216ENST00000544381 LY75O60449 1722 aa12.9□□□□□ -0.34
MDH1-216ENST00000544381 RAPGEF4Q8WZA2 1011 aa12.89□□□□□ -0.35
MDH1-216ENST00000544381 ACSBG1Q96GR2 724 aa12.89□□□□□ -0.35
MDH1-216ENST00000544381 DOT1LQ8TEK3 1739 aa12.89□□□□□ -0.35
MDH1-216ENST00000544381 EXOC5O00471 708 aa12.88□□□□□ -0.35
MDH1-216ENST00000544381 C1QTNF8P60827 252 aa12.88□□□□□ -0.35
MDH1-216ENST00000544381 ZNF530Q6P9A1 599 aaPredicted RBP12.88□□□□□ -0.35
MDH1-216ENST00000544381 CHL1O00533 1208 aa12.88□□□□□ -0.35
MDH1-216ENST00000544381 TATP17735 454 aaPredicted RBP12.88□□□□□ -0.35
MDH1-216ENST00000544381 C1orf141Q5JVX7 400 aa12.88□□□□□ -0.35
MDH1-216ENST00000544381 ZNF428Q96B54 188 aa12.88□□□□□ -0.35
MDH1-216ENST00000544381 ARXQ96QS3 562 aa12.88□□□□□ -0.35
MDH1-216ENST00000544381 AKAP4Q5JQC9 854 aa12.87□□□□□ -0.35
MDH1-216ENST00000544381 FRAT1Q92837 279 aaPredicted RBP12.87□□□□□ -0.35
MDH1-216ENST00000544381 EXOC6Q8TAG9 804 aa12.86□□□□□ -0.35
MDH1-216ENST00000544381 BCL2L13Q9BXK5 485 aa12.86□□□□□ -0.35
MDH1-216ENST00000544381 SMC4Q9NTJ3 1288 aa12.86□□□□□ -0.35
MDH1-216ENST00000544381 TSPYL4Q9UJ04 414 aa12.86□□□□□ -0.35
MDH1-216ENST00000544381 SPG7Q9UQ90 795 aa12.86□□□□□ -0.35
MDH1-216ENST00000544381 MMRN1Q13201 1228 aa12.85□□□□□ -0.35
MDH1-216ENST00000544381 TAF7Q15545 349 aaPredicted RBP12.85□□□□□ -0.35
MDH1-216ENST00000544381 TWISTNBQ3B726 338 aaPredicted RBP12.85□□□□□ -0.35
MDH1-216ENST00000544381 ALDH1L2Q3SY69 923 aa12.85□□□□□ -0.35
MDH1-216ENST00000544381 IL17REQ8NFR9 667 aa12.85□□□□□ -0.35
MDH1-216ENST00000544381 CRBNQ96SW2 442 aa12.85□□□□□ -0.35
MDH1-216ENST00000544381 PNPLA7Q6ZV29 1317 aa12.84□□□□□ -0.35
MDH1-216ENST00000544381 PLEKHG2Q9H7P9 1386 aa12.84□□□□□ -0.35
MDH1-216ENST00000544381 ELL2O00472 640 aaPredicted RBP12.84□□□□□ -0.35
MDH1-216ENST00000544381 VAMP4O75379 141 aa12.84□□□□□ -0.35
MDH1-216ENST00000544381 MS4A1P11836 297 aa12.84□□□□□ -0.35
MDH1-216ENST00000544381 PBX2P40425 430 aa12.84□□□□□ -0.35
MDH1-216ENST00000544381 PDE3AQ14432 1141 aa12.84□□□□□ -0.35
MDH1-216ENST00000544381 C20orf194Q5TEA3 1177 aa12.84□□□□□ -0.35
MDH1-216ENST00000544381 SSH1Q8WYL5 1049 aa12.84□□□□□ -0.35
MDH1-216ENST00000544381 CCDC136Q96JN2 1154 aa12.84□□□□□ -0.35
MDH1-216ENST00000544381 BABAM1Q9NWV8 329 aa12.84□□□□□ -0.35
MDH1-216ENST00000544381 IL2RBP14784 551 aa12.83□□□□□ -0.36
MDH1-216ENST00000544381 MAP3K9P80192 1104 aa12.83□□□□□ -0.36
MDH1-216ENST00000544381 ZKSCAN2Q63HK3 967 aa12.83□□□□□ -0.36
MDH1-216ENST00000544381 TSPYL6Q8N831 410 aa12.83□□□□□ -0.36
MDH1-216ENST00000544381 C8orf58Q8NAV2 365 aa12.83□□□□□ -0.36
MDH1-216ENST00000544381 NLGN2Q8NFZ4 835 aa12.83□□□□□ -0.36
MDH1-216ENST00000544381 MIS18AQ9NYP9 233 aa12.83□□□□□ -0.36
MDH1-216ENST00000544381 IPO8O15397 1037 aaKnown RBP12.82□□□□□ -0.36
MDH1-216ENST00000544381 KCNQ4P56696 695 aa12.82□□□□□ -0.36
MDH1-216ENST00000544381 TEFQ10587 303 aa12.82□□□□□ -0.36
MDH1-216ENST00000544381 B4GALNT3Q6L9W6 998 aa12.82□□□□□ -0.36
MDH1-216ENST00000544381 MPRIPQ6WCQ1 1025 aa12.82□□□□□ -0.36
MDH1-216ENST00000544381 LGR6Q9HBX8 967 aa12.82□□□□□ -0.36
MDH1-216ENST00000544381 EMILIN3Q9NT22 766 aa12.82□□□□□ -0.36
MDH1-216ENST00000544381 KIF16BQ96L93 1317 aa12.82□□□□□ -0.36
MDH1-216ENST00000544381 CEMIPQ8WUJ3 1361 aa12.81□□□□□ -0.36
MDH1-216ENST00000544381 MEGF6O75095 1541 aa12.81□□□□□ -0.36
MDH1-216ENST00000544381 RNMTO43148 476 aaKnown RBP12.81□□□□□ -0.36
MDH1-216ENST00000544381 PPP4R3BQ5MIZ7 849 aa12.81□□□□□ -0.36
MDH1-216ENST00000544381 TAF1LQ8IZX4 1826 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms