RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 IFNL2Q8IZJ0 200 aa21.52■■□□□ 1.04
SCARB1-208ENST00000544327 RTN4Q9NQC3 1192 aaKnown RBP21.52■■□□□ 1.04
SCARB1-208ENST00000544327 OS9Q13438 667 aaPredicted RBP21.51■■□□□ 1.03
SCARB1-208ENST00000544327 LARP1Q6PKG0 1096 aaKnown RBP21.51■■□□□ 1.03
SCARB1-208ENST00000544327 CADPS2Q86UW7 1296 aa21.51■■□□□ 1.03
SCARB1-208ENST00000544327 LSG1Q9H089 658 aaKnown RBP21.51■■□□□ 1.03
SCARB1-208ENST00000544327 GPATCH3Q96I76 525 aa21.5■■□□□ 1.03
SCARB1-208ENST00000544327 KAZALD1Q96I82 304 aa21.5■■□□□ 1.03
SCARB1-208ENST00000544327 SUCLG2Q96I99 432 aa21.5■■□□□ 1.03
SCARB1-208ENST00000544327 ECHDC1Q9NTX5 307 aa21.5■■□□□ 1.03
SCARB1-208ENST00000544327 LMBRD1Q9NUN5 540 aa21.5■■□□□ 1.03
SCARB1-208ENST00000544327 MCTP1Q6DN14 999 aa21.49■■□□□ 1.03
SCARB1-208ENST00000544327 DCAF5Q96JK2 942 aa21.49■■□□□ 1.03
SCARB1-208ENST00000544327 IGKV5-2P06315 115 aa21.48■■□□□ 1.03
SCARB1-208ENST00000544327 DDX49Q9Y6V7 483 aaKnown RBP21.48■■□□□ 1.03
SCARB1-208ENST00000544327 SPATA31A3Q5VYP0 1347 aa21.48■■□□□ 1.03
SCARB1-208ENST00000544327 LAMB4A4D0S4 1761 aa21.48■■□□□ 1.03
SCARB1-208ENST00000544327 MAP4K4O95819 1239 aaPredicted RBP21.48■■□□□ 1.03
SCARB1-208ENST00000544327 SLC39A6Q13433 755 aa21.48■■□□□ 1.03
SCARB1-208ENST00000544327 PANK2Q9BZ23 570 aa21.48■■□□□ 1.03
SCARB1-208ENST00000544327 GLI3P10071 1580 aa21.47■■□□□ 1.03
SCARB1-208ENST00000544327 LRP10Q7Z4F1 713 aa21.47■■□□□ 1.03
SCARB1-208ENST00000544327 GAS2L3Q86XJ1 694 aa21.47■■□□□ 1.03
SCARB1-208ENST00000544327 NFATC2IPQ8NCF5 419 aa21.47■■□□□ 1.03
SCARB1-208ENST00000544327 RUFY2Q8WXA3 655 aa21.47■■□□□ 1.03
SCARB1-208ENST00000544327 METTL22Q9BUU2 404 aaPredicted RBP21.47■■□□□ 1.03
SCARB1-208ENST00000544327 COL15A1P39059 1388 aa21.47■■□□□ 1.03
SCARB1-208ENST00000544327 NEURL1BA8MQ27 555 aa21.46■■□□□ 1.03
SCARB1-208ENST00000544327 BRD1O95696 1058 aa21.46■■□□□ 1.03
SCARB1-208ENST00000544327 IFIT2P09913 472 aaKnown RBP21.46■■□□□ 1.03
SCARB1-208ENST00000544327 RIC3Q7Z5B4 369 aa21.46■■□□□ 1.03
SCARB1-208ENST00000544327 BICC1Q9H694 974 aaKnown RBP21.46■■□□□ 1.03
SCARB1-208ENST00000544327 NEXNQ0ZGT2 675 aa21.45■■□□□ 1.03
SCARB1-208ENST00000544327 DDX17Q92841 729 aaKnown RBP21.45■■□□□ 1.03
SCARB1-208ENST00000544327 ZNF496Q96IT1 587 aaPredicted RBP21.45■■□□□ 1.03
SCARB1-208ENST00000544327 PA2G4Q9UQ80 394 aaKnown RBP21.45■■□□□ 1.03
SCARB1-208ENST00000544327 SNX14Q9Y5W7 946 aa21.45■■□□□ 1.03
SCARB1-208ENST00000544327 SNRPA1P09661 255 aaKnown RBP21.45■■□□□ 1.02
SCARB1-208ENST00000544327 ZNF445P59923 1031 aa21.45■■□□□ 1.02
SCARB1-208ENST00000544327 AIMP1Q12904 312 aaKnown RBP21.45■■□□□ 1.02
SCARB1-208ENST00000544327 EVI5LQ96CN4 794 aa21.45■■□□□ 1.02
SCARB1-208ENST00000544327 CYP27B1O15528 508 aa21.44■■□□□ 1.02
SCARB1-208ENST00000544327 SASH1O94885 1247 aa21.44■■□□□ 1.02
SCARB1-208ENST00000544327 CSB-PGBD3P0DP91 1061 aa21.44■■□□□ 1.02
SCARB1-208ENST00000544327 GCKRQ14397 625 aa21.44■■□□□ 1.02
SCARB1-208ENST00000544327 KIAA1211Q6ZU35 1233 aa21.44■■□□□ 1.02
SCARB1-208ENST00000544327 XAGE3Q8WTP9 111 aa21.44■■□□□ 1.02
SCARB1-208ENST00000544327 KCNB2Q92953 911 aa21.44■■□□□ 1.02
SCARB1-208ENST00000544327 TTC14Q96N46 770 aa21.44■■□□□ 1.02
SCARB1-208ENST00000544327 G3BP1Q13283 466 aaKnown RBP eCLIP21.43■■□□□ 1.02
SCARB1-208ENST00000544327 ARXQ96QS3 562 aa21.43■■□□□ 1.02
SCARB1-208ENST00000544327 DIAPH3Q9NSV4 1193 aa21.43■■□□□ 1.02
SCARB1-208ENST00000544327 XIRP1Q702N8 1843 aaKnown RBP21.43■■□□□ 1.02
SCARB1-208ENST00000544327 AACSQ86V21 672 aa21.43■■□□□ 1.02
SCARB1-208ENST00000544327 FMNL2Q96PY5 1086 aa21.43■■□□□ 1.02
SCARB1-208ENST00000544327 UPF3BQ9BZI7 483 aaKnown RBP21.43■■□□□ 1.02
SCARB1-208ENST00000544327 SNRKQ9NRH2 765 aa21.43■■□□□ 1.02
SCARB1-208ENST00000544327 COPS6Q7L5N1 327 aa21.42■■□□□ 1.02
SCARB1-208ENST00000544327 ARFGEF2Q9Y6D5 1785 aa21.42■■□□□ 1.02
SCARB1-208ENST00000544327 HIP1O00291 1037 aa21.41■■□□□ 1.02
SCARB1-208ENST00000544327 CWC27Q6UX04 472 aaKnown RBP21.41■■□□□ 1.02
SCARB1-208ENST00000544327 TTC5Q8N0Z6 440 aa21.41■■□□□ 1.02
SCARB1-208ENST00000544327 AFDNP55196 1824 aaKnown RBP21.4■■□□□ 1.02
SCARB1-208ENST00000544327 MYL6BP14649 208 aa21.4■■□□□ 1.02
SCARB1-208ENST00000544327 CHRNA2Q15822 529 aa21.4■■□□□ 1.02
SCARB1-208ENST00000544327 ANKRD13DQ6ZTN6 518 aa21.4■■□□□ 1.02
SCARB1-208ENST00000544327 CABLES1Q8TDN4 633 aa21.4■■□□□ 1.02
SCARB1-208ENST00000544327 EAF2Q96CJ1 260 aaPredicted RBP21.4■■□□□ 1.02
SCARB1-208ENST00000544327 ERBB4Q15303 1308 aa21.4■■□□□ 1.02
SCARB1-208ENST00000544327 RASEFQ8IZ41 740 aa21.39■■□□□ 1.02
SCARB1-208ENST00000544327 MYD88Q99836 296 aa21.39■■□□□ 1.02
SCARB1-208ENST00000544327 TM6SF1Q9BZW5 370 aa21.39■■□□□ 1.02
SCARB1-208ENST00000544327 COPRSQ9NQ92 184 aa21.39■■□□□ 1.01
SCARB1-208ENST00000544327 USP16Q9Y5T5 823 aa21.39■■□□□ 1.01
SCARB1-208ENST00000544327 UBR2Q8IWV8 1755 aa21.38■■□□□ 1.01
SCARB1-208ENST00000544327 PRPF40AO75400 957 aaKnown RBP21.38■■□□□ 1.01
SCARB1-208ENST00000544327 RABL6Q3YEC7 729 aaPredicted RBP21.37■■□□□ 1.01
SCARB1-208ENST00000544327 GPT2Q8TD30 523 aa21.37■■□□□ 1.01
SCARB1-208ENST00000544327 PAPPAQ13219 1627 aa21.37■■□□□ 1.01
SCARB1-208ENST00000544327 MBD3O95983 291 aa21.36■■□□□ 1.01
SCARB1-208ENST00000544327 CABP4P57796 275 aa21.36■■□□□ 1.01
SCARB1-208ENST00000544327 ZSCAN23Q3MJ62 389 aa21.36■■□□□ 1.01
SCARB1-208ENST00000544327 EPHA10Q5JZY3 1008 aa21.36■■□□□ 1.01
SCARB1-208ENST00000544327 LIMCH1Q9UPQ0 1083 aa21.36■■□□□ 1.01
SCARB1-208ENST00000544327 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.36■■□□□ 1.01
SCARB1-208ENST00000544327 WDR33Q9C0J8 1336 aaKnown RBP21.36■■□□□ 1.01
SCARB1-208ENST00000544327 RFX5P48382 616 aaPredicted RBP21.36■■□□□ 1.01
SCARB1-208ENST00000544327 PTH1RQ03431 593 aa21.36■■□□□ 1.01
SCARB1-208ENST00000544327 CAVIN1Q6NZI2 390 aaKnown RBP21.36■■□□□ 1.01
SCARB1-208ENST00000544327 RRAGDQ9NQL2 400 aaPredicted RBP21.36■■□□□ 1.01
SCARB1-208ENST00000544327 CCDC171Q6TFL3 1326 aa21.35■■□□□ 1.01
SCARB1-208ENST00000544327 AK2P54819 239 aa21.35■■□□□ 1.01
SCARB1-208ENST00000544327 NOL8Q76FK4 1167 aaKnown RBP21.35■■□□□ 1.01
SCARB1-208ENST00000544327 WDR17Q8IZU2 1322 aa21.34■■□□□ 1.01
SCARB1-208ENST00000544327 NECTIN1Q15223 517 aa21.34■■□□□ 1.01
SCARB1-208ENST00000544327 RUFY3Q7L099 469 aa21.34■■□□□ 1.01
SCARB1-208ENST00000544327 PLBD2Q8NHP8 589 aa21.34■■□□□ 1.01
SCARB1-208ENST00000544327 RPAP1Q9BWH6 1393 aaPredicted RBP21.34■■□□□ 1.01
SCARB1-208ENST00000544327 VPS53Q5VIR6 699 aa21.34■■□□□ 1.01
SCARB1-208ENST00000544327 CCDC8Q9H0W5 538 aaPredicted RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms