RNA–Protein interactions for RNA: ENST00000543695.5

LDHA-222, Transcript of lactate dehydrogenase A, human

TSL 5

Gene LDHA, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-222	ENST00000543695	SPG7	Q9UQ90	795 aa		13.93	□□□□□ -0.18
LDHA-222	ENST00000543695	CYP27B1	O15528	508 aa		13.92	□□□□□ -0.18
LDHA-222	ENST00000543695	RNMT	O43148	476 aa	Known RBP	13.92	□□□□□ -0.18
LDHA-222	ENST00000543695	TEF	Q10587	303 aa		13.92	□□□□□ -0.18
LDHA-222	ENST00000543695	MPRIP	Q6WCQ1	1025 aa		13.92	□□□□□ -0.18
LDHA-222	ENST00000543695	TBC1D9	Q6ZT07	1266 aa		13.92	□□□□□ -0.18
LDHA-222	ENST00000543695	SNX21	Q969T3	373 aa		13.92	□□□□□ -0.18
LDHA-222	ENST00000543695	ANTXR1	Q9H6X2	564 aa		13.92	□□□□□ -0.18
LDHA-222	ENST00000543695	C5	P01031	1676 aa		13.91	□□□□□ -0.18
LDHA-222	ENST00000543695	GSPT1	P15170	499 aa	Known RBP	13.91	□□□□□ -0.18
LDHA-222	ENST00000543695	ATP8B2	P98198	1209 aa		13.91	□□□□□ -0.18
LDHA-222	ENST00000543695	C1orf141	Q5JVX7	400 aa		13.91	□□□□□ -0.18
LDHA-222	ENST00000543695	SYT17	Q9BSW7	474 aa		13.91	□□□□□ -0.18
LDHA-222	ENST00000543695	LGR6	Q9HBX8	967 aa		13.91	□□□□□ -0.18
LDHA-222	ENST00000543695	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
LDHA-222	ENST00000543695	HSCB	Q8IWL3	235 aa		13.9	□□□□□ -0.18
LDHA-222	ENST00000543695	SMARCC1	Q92922	1105 aa	Predicted RBP	13.9	□□□□□ -0.18
LDHA-222	ENST00000543695	ARX	Q96QS3	562 aa		13.9	□□□□□ -0.18
LDHA-222	ENST00000543695	SGIP1	Q9BQI5	828 aa		13.9	□□□□□ -0.18
LDHA-222	ENST00000543695	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.9	□□□□□ -0.18
LDHA-222	ENST00000543695	OSBPL3	Q9H4L5	887 aa		13.9	□□□□□ -0.18
LDHA-222	ENST00000543695	HEG1	Q9ULI3	1381 aa		13.9	□□□□□ -0.18
LDHA-222	ENST00000543695	BTAF1	O14981	1849 aa		13.9	□□□□□ -0.18
LDHA-222	ENST00000543695	LAMB4	A4D0S4	1761 aa		13.89	□□□□□ -0.19
LDHA-222	ENST00000543695	BTBD11	A6QL63	1104 aa		13.89	□□□□□ -0.19
LDHA-222	ENST00000543695	POLD1	P28340	1107 aa		13.89	□□□□□ -0.19
LDHA-222	ENST00000543695	NKX1-1	Q15270	411 aa	Predicted RBP	13.89	□□□□□ -0.19
LDHA-222	ENST00000543695	MRC1	P22897	1456 aa		13.88	□□□□□ -0.19
LDHA-222	ENST00000543695	YY1	P25490	414 aa		13.88	□□□□□ -0.19
LDHA-222	ENST00000543695	IFNL2	Q8IZJ0	200 aa		13.88	□□□□□ -0.19
LDHA-222	ENST00000543695	CASZ1	Q86V15	1759 aa		13.88	□□□□□ -0.19
LDHA-222	ENST00000543695	PNPLA7	Q6ZV29	1317 aa		13.88	□□□□□ -0.19
LDHA-222	ENST00000543695	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.87	□□□□□ -0.19
LDHA-222	ENST00000543695	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.87	□□□□□ -0.19
LDHA-222	ENST00000543695	NECTIN2	Q92692	538 aa		13.87	□□□□□ -0.19
LDHA-222	ENST00000543695	SALL3	Q9BXA9	1300 aa		13.87	□□□□□ -0.19
LDHA-222	ENST00000543695	SMARCA5	O60264	1052 aa	Predicted RBP	13.86	□□□□□ -0.19
LDHA-222	ENST00000543695	UBTFL1	P0CB47	393 aa	Predicted RBP	13.86	□□□□□ -0.19
LDHA-222	ENST00000543695	CASC1	Q6TDU7	716 aa		13.86	□□□□□ -0.19
LDHA-222	ENST00000543695	FLAD1	Q8NFF5	587 aa		13.86	□□□□□ -0.19
LDHA-222	ENST00000543695	PIGB	Q92521	554 aa		13.86	□□□□□ -0.19
LDHA-222	ENST00000543695	SRCIN1	Q9C0H9	1055 aa		13.86	□□□□□ -0.19
LDHA-222	ENST00000543695	USP44	Q9H0E7	712 aa		13.86	□□□□□ -0.19
LDHA-222	ENST00000543695	SLK	Q9H2G2	1235 aa	Predicted RBP	13.86	□□□□□ -0.19
LDHA-222	ENST00000543695	PHAX	Q9H814	394 aa	Known RBP	13.86	□□□□□ -0.19
LDHA-222	ENST00000543695	AOX1	Q06278	1338 aa		13.86	□□□□□ -0.19
LDHA-222	ENST00000543695	PALLD	Q8WX93	1383 aa		13.85	□□□□□ -0.19
LDHA-222	ENST00000543695	FRAT2	O75474	233 aa	Predicted RBP	13.85	□□□□□ -0.19
LDHA-222	ENST00000543695	PHKG2	P15735	406 aa		13.85	□□□□□ -0.19
LDHA-222	ENST00000543695	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.85	□□□□□ -0.19
LDHA-222	ENST00000543695	DNAAF4	Q8WXU2	420 aa		13.85	□□□□□ -0.19
LDHA-222	ENST00000543695	KIF2C	Q99661	725 aa		13.85	□□□□□ -0.19
LDHA-222	ENST00000543695	LRRCC1	Q9C099	1032 aa		13.85	□□□□□ -0.19
LDHA-222	ENST00000543695	TMOD3	Q9NYL9	352 aa		13.85	□□□□□ -0.19
LDHA-222	ENST00000543695	CHMP5	Q9NZZ3	219 aa		13.85	□□□□□ -0.19
LDHA-222	ENST00000543695	LRRFIP2	Q9Y608	721 aa	Known RBP	13.85	□□□□□ -0.19
LDHA-222	ENST00000543695	PAPPA	Q13219	1627 aa		13.84	□□□□□ -0.19
LDHA-222	ENST00000543695	KCNQ3	O43525	872 aa		13.84	□□□□□ -0.19
LDHA-222	ENST00000543695	RAB11FIP3	O75154	756 aa		13.84	□□□□□ -0.19
LDHA-222	ENST00000543695	EIF2S2	P20042	333 aa	Known RBP	13.84	□□□□□ -0.19
LDHA-222	ENST00000543695	SDS	P20132	328 aa		13.84	□□□□□ -0.19
LDHA-222	ENST00000543695	PDE1A	P54750	535 aa		13.84	□□□□□ -0.19
LDHA-222	ENST00000543695	POLA2	Q14181	598 aa		13.84	□□□□□ -0.19
LDHA-222	ENST00000543695	COL23A1	Q86Y22	540 aa	Predicted RBP	13.84	□□□□□ -0.19
LDHA-222	ENST00000543695	SSH3	Q8TE77	659 aa		13.84	□□□□□ -0.19
LDHA-222	ENST00000543695	CHPF2	Q9P2E5	772 aa		13.84	□□□□□ -0.19
LDHA-222	ENST00000543695	DBF4	Q9UBU7	674 aa	Predicted RBP	13.84	□□□□□ -0.19
LDHA-222	ENST00000543695	AFDN	P55196	1824 aa	Known RBP	13.84	□□□□□ -0.19
LDHA-222	ENST00000543695	ADCY9	O60503	1353 aa		13.83	□□□□□ -0.19
LDHA-222	ENST00000543695	KDM6A	O15550	1401 aa	Predicted RBP	13.83	□□□□□ -0.2
LDHA-222	ENST00000543695	PNMA6E	A0A0J9YXQ4	647 aa		13.83	□□□□□ -0.2
LDHA-222	ENST00000543695	GIGYF1	O75420	1035 aa	Predicted RBP	13.83	□□□□□ -0.2
LDHA-222	ENST00000543695	BEND3	Q5T5X7	828 aa		13.83	□□□□□ -0.2
LDHA-222	ENST00000543695	KLHL34	Q8N239	644 aa		13.83	□□□□□ -0.2
LDHA-222	ENST00000543695	STAP2	Q9UGK3	403 aa		13.83	□□□□□ -0.2
LDHA-222	ENST00000543695	UBR2	Q8IWV8	1755 aa		13.82	□□□□□ -0.2
LDHA-222	ENST00000543695	ALDH1L1	O75891	902 aa		13.82	□□□□□ -0.2
LDHA-222	ENST00000543695	HSP90AB1	P08238	724 aa	Known RBP	13.82	□□□□□ -0.2
LDHA-222	ENST00000543695	RABEP1	Q15276	862 aa		13.82	□□□□□ -0.2
LDHA-222	ENST00000543695	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.82	□□□□□ -0.2
LDHA-222	ENST00000543695	HDAC5	Q9UQL6	1122 aa		13.82	□□□□□ -0.2
LDHA-222	ENST00000543695	EXOC6B	Q9Y2D4	811 aa		13.82	□□□□□ -0.2
LDHA-222	ENST00000543695	DOT1L	Q8TEK3	1739 aa		13.81	□□□□□ -0.2
LDHA-222	ENST00000543695	ARFGEF2	Q9Y6D5	1785 aa		13.81	□□□□□ -0.2
LDHA-222	ENST00000543695	LOC102724428	A0A0B4J2F2	783 aa		13.81	□□□□□ -0.2
LDHA-222	ENST00000543695	ERVV-2	B6SEH9	535 aa		13.81	□□□□□ -0.2
LDHA-222	ENST00000543695	APBB1	O00213	710 aa		13.81	□□□□□ -0.2
LDHA-222	ENST00000543695	SIK1	P57059	783 aa		13.81	□□□□□ -0.2
LDHA-222	ENST00000543695	GSE1	Q14687	1217 aa		13.81	□□□□□ -0.2
LDHA-222	ENST00000543695	DCAF5	Q96JK2	942 aa		13.81	□□□□□ -0.2
LDHA-222	ENST00000543695	AK7	Q96M32	723 aa		13.81	□□□□□ -0.2
LDHA-222	ENST00000543695	USP26	Q9BXU7	913 aa		13.81	□□□□□ -0.2
LDHA-222	ENST00000543695	HYPK	Q9NX55	129 aa		13.81	□□□□□ -0.2
LDHA-222	ENST00000543695	ASAP1	Q9ULH1	1129 aa		13.81	□□□□□ -0.2
LDHA-222	ENST00000543695	SHANK3	Q9BYB0	1731 aa		13.81	□□□□□ -0.2
LDHA-222	ENST00000543695	REC8	O95072	547 aa		13.8	□□□□□ -0.2
LDHA-222	ENST00000543695	DDIT3	P35638	169 aa		13.8	□□□□□ -0.2
LDHA-222	ENST00000543695	GPR162	Q16538	588 aa		13.8	□□□□□ -0.2
LDHA-222	ENST00000543695	PI4KAP2	A4QPH2	592 aa		13.79	□□□□□ -0.2
LDHA-222	ENST00000543695		K7ELQ4	463 aa	Predicted RBP	13.79	□□□□□ -0.2

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